mRNA_M-pyrifera_M_contig112741.2647.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig112741.2647.1
Unique NamemRNA_M-pyrifera_M_contig112741.2647.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: UPI001C7285AD (N-acetyltransferase aca1 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C7285AD)

HSP 1 Score: 110 bits (276), Expect = 1.350e-28
Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFST 285
            N+PGRSSHICNAGFL H + + +G+G  + T ++ +AK+L Y+ASFFNLVY TN  S  L   +G+  +G VP+AG++ +  YVDA Q+Y DFST
Sbjct:   94 NYPGRSSHICNAGFLVHKQQRRKGIGEILFTKYLKIAKDLGYEASFFNLVYATNQGSVRLCRKLGFKEVGIVPKAGKMKDLGYVDAYQFYYDFST 188          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: A0A210PL54_MIZYE (L-azetidine-2-carboxylic acid acetyltransferase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PL54_MIZYE)

HSP 1 Score: 109 bits (273), Expect = 4.030e-28
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFS 282
            NFPGRSSHICNAGF     ++G+G G+FM   ++ +A++L YQASFFNLV+ +N  S  LW SMG+T IG VP AG L    + DA+Q+Y D +
Sbjct:   97 NFPGRSSHICNAGFAVSKSSRGQGAGKFMVGHYLQIARDLGYQASFFNLVFVSNETSVKLWRSMGFTEIGRVPNAGNLKGRGFTDALQFYYDLT 190          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: UPI00145913BD (N-acetyltransferase aca1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145913BD)

HSP 1 Score: 109 bits (272), Expect = 5.690e-28
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFS 282
            NFPGR SHICNAGF     ++G GVG+FM   ++ +A++L YQ+SFFNLV+ +N  S +LW SMG+T +G VP AG L    Y DAIQ+Y D +
Sbjct:   97 NFPGRCSHICNAGFAVKKSSRGLGVGKFMVGHYLQIARDLGYQSSFFNLVFVSNEASVSLWRSMGFTELGRVPNAGNLKGRGYTDAIQFYYDLT 190          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: A0A8K0E4B1_BRALA (Hypp6446 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0E4B1_BRALA)

HSP 1 Score: 109 bits (272), Expect = 6.460e-28
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFST 285
            NFPGRSSHICN GF+    A+G G+G+ M+ +F+ +A++L Y+ASFFNLVY  N  S  +W  +G+  IG VP AG L    Y DA+Q+Y DFST
Sbjct:   98 NFPGRSSHICNGGFIVKETARGMGLGKKMAEYFLYIARDLGYKASFFNLVYVNNEASLKIWRGLGFKEIGLVPNAGYLKGLGYTDAVQFYYDFST 192          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: UPI001B888BFA (N-acetyltransferase aca1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B888BFA)

HSP 1 Score: 108 bits (269), Expect = 1.700e-27
Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFST 285
            NFPGRSSHICN GF+     +G G+G F+   F+ +A++L Y+ASFFNLVY +NA S ALW   G+  IG VP+AG      Y+DA+Q+Y D +T
Sbjct:   96 NFPGRSSHICNTGFIVKKIQRGTGIGSFLVPEFLQIARDLGYRASFFNLVYASNASSIALWRKFGFKEIGVVPQAGYFEGTGYIDALQFYYDLTT 190          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: A0A4Y2FX12_ARAVE (L-azetidine-2-carboxylic acid acetyltransferase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2FX12_ARAVE)

HSP 1 Score: 110 bits (274), Expect = 3.190e-27
Identity = 49/95 (51.58%), Postives = 70/95 (73.68%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFST 285
            NFPGRSSHICNAGFL + + + RG+G F+   ++ +AK+L Y+ SFFNLVY+TN  S  +   +G+T IGTVP+AG++    YV+A+Q+Y D +T
Sbjct:  207 NFPGRSSHICNAGFLVNRDFRNRGIGEFLFRKYLRIAKDLGYEGSFFNLVYETNTASVRICRKLGFTEIGTVPKAGKMKGLGYVNALQFYYDLTT 301          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: UPI001E1D84F8 (N-acetyltransferase aca1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D84F8)

HSP 1 Score: 107 bits (266), Expect = 4.020e-27
Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFS 282
            NFPGR SHICNAGF+    A+GRGV  FM   ++ +A++L Y+ASFFNLV+ TN  S  LW   G+T IG VP AG L    Y DA+Q+Y D +
Sbjct:   97 NFPGRCSHICNAGFIVKKAARGRGVATFMVENYLQIARDLGYRASFFNLVFVTNETSIRLWRKFGFTEIGRVPNAGNLKGKGYTDALQFYYDLT 190          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: A0A1Z4L5N1_NOSLI (GCN5-related N-acetyltransferase n=6 Tax=Nostoc TaxID=1177 RepID=A0A1Z4L5N1_NOSLI)

HSP 1 Score: 105 bits (263), Expect = 8.810e-27
Identity = 45/91 (49.45%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYK 273
            NFPGR SHICNAGF+  A  +G+G+GRFM    + +A  L Y+A  FNLV++TN  S  LW+S+G+ ++G +PRA +L N + VDA+  Y+
Sbjct:   88 NFPGRCSHICNAGFIVQARLRGQGIGRFMGESMLKIAAHLGYEAVMFNLVFETNIASITLWQSLGFEIVGRIPRAAKLENEQVVDALMLYR 178          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: UPI00110824CF (GNAT family N-acetyltransferase n=1 Tax=Nostoc sp. PA-18-2419 TaxID=2575443 RepID=UPI00110824CF)

HSP 1 Score: 105 bits (262), Expect = 1.250e-26
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYK 273
            NFPGR SHICNAGF+  A  +G+G+GRFM    + +A  L Y+A  FNLV++TN  S  LW+S+G+ +IG +P A  L NG+ VDA+ +Y+
Sbjct:   88 NFPGRCSHICNAGFIVQAPLRGQGIGRFMGEAMLLIAANLGYEAVMFNLVFETNIASITLWQSLGFEIIGRIPAAANLDNGQVVDALIFYR 178          
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Match: C3YN34_BRAFL (N-acetyltransferase domain-containing protein n=2 Tax=Branchiostoma TaxID=7737 RepID=C3YN34_BRAFL)

HSP 1 Score: 105 bits (263), Expect = 1.500e-26
Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 1
Query:    1 NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLVYKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFST 285
            NFPGRSSHICNAGF+     +G+G+G+ M+  F+ +A++L Y+ASFFNLVY  N  S   W  +G+  IG VP AG +    Y DA+Q+Y DFST
Sbjct:   99 NFPGRSSHICNAGFIVKESERGQGLGKKMAERFLYIARDLGYKASFFNLVYVNNEASLRTWRGLGFKEIGIVPNAGFIKGLGYTDAVQFYYDFST 193          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112741.2647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C7285AD1.350e-2852.63N-acetyltransferase aca1 n=1 Tax=Parasteatoda tepi... [more]
A0A210PL54_MIZYE4.030e-2853.19L-azetidine-2-carboxylic acid acetyltransferase n=... [more]
UPI00145913BD5.690e-2853.19N-acetyltransferase aca1-like n=1 Tax=Pecten maxim... [more]
A0A8K0E4B1_BRALA6.460e-2852.63Hypp6446 protein n=1 Tax=Branchiostoma lanceolatum... [more]
UPI001B888BFA1.700e-2751.58N-acetyltransferase aca1-like n=1 Tax=Gigantopelta... [more]
A0A4Y2FX12_ARAVE3.190e-2751.58L-azetidine-2-carboxylic acid acetyltransferase n=... [more]
UPI001E1D84F84.020e-2753.19N-acetyltransferase aca1-like n=1 Tax=Mercenaria m... [more]
A0A1Z4L5N1_NOSLI8.810e-2749.45GCN5-related N-acetyltransferase n=6 Tax=Nostoc Ta... [more]
UPI00110824CF1.250e-2650.55GNAT family N-acetyltransferase n=1 Tax=Nostoc sp.... [more]
C3YN34_BRAFL1.500e-2651.58N-acetyltransferase domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112741contigM-pyrifera_M_contig112741:292..582 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score105.9
Seed ortholog evalue1.1e-20
Seed eggNOG ortholog7739.XP_002602128.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2C0N0@1,2RR82@2759,38VHT@33154,3C4PV@33208,3DJZJ@33213
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons1
Model size291
Cds size291
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815640.9096694-CDS-M-pyrifera_M_contig112741:291..5821622815640.9096694-CDS-M-pyrifera_M_contig112741:291..582Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112741 292..582 -
1692277500.7627993-CDS-M-pyrifera_M_contig112741:291..5821692277500.7627993-CDS-M-pyrifera_M_contig112741:291..582Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112741 292..582 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112741.2647.1prot_M-pyrifera_M_contig112741.2647.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig112741 292..582 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig112741.2647.1

>prot_M-pyrifera_M_contig112741.2647.1 ID=prot_M-pyrifera_M_contig112741.2647.1|Name=mRNA_M-pyrifera_M_contig112741.2647.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
NFPGRSSHICNAGFLSHAEAQGRGVGRFMSTWFVPLAKELAYQASFFNLV
YKTNARSHALWESMGYTVIGTVPRAGRLSNGEYVDAIQYYKDFSTC*
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mRNA from alignment at M-pyrifera_M_contig112741:292..582-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig112741.2647.1 ID=mRNA_M-pyrifera_M_contig112741.2647.1|Name=mRNA_M-pyrifera_M_contig112741.2647.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig112741:292..582- (Macrocystis pyrifera P11B4 male)
AACTTCCCTGGCCGCTCCAGCCACATCTGCAATGCCGGATTCCTCTCTCA TGCCGAGGCCCAGGGCCGGGGGGTGGGCCGCTTCATGTCGACCTGGTTCG TGCCGCTTGCCAAGGAGCTGGCCTACCAGGCGTCTTTCTTCAACCTGGTT TACAAGACTAATGCCAGGAGCCATGCCCTCTGGGAGAGCATGGGCTACAC GGTGATCGGCACCGTGCCTCGCGCTGGACGGCTCTCCAATGGCGAATACG TGGACGCCATCCAGTACTACAAGGACTTCAGCACTTGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig112741:292..582-

>mRNA_M-pyrifera_M_contig112741.2647.1 ID=mRNA_M-pyrifera_M_contig112741.2647.1|Name=mRNA_M-pyrifera_M_contig112741.2647.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig112741:292..582- (Macrocystis pyrifera P11B4 male)
AACTTCCCTGGCCGCTCCAGCCACATCTGCAATGCCGGATTCCTCTCTCA
TGCCGAGGCCCAGGGCCGGGGGGTGGGCCGCTTCATGTCGACCTGGTTCG
TGCCGCTTGCCAAGGAGCTGGCCTACCAGGCGTCTTTCTTCAACCTGGTT
TACAAGACTAATGCCAGGAGCCATGCCCTCTGGGAGAGCATGGGCTACAC
GGTGATCGGCACCGTGCCTCGCGCTGGACGGCTCTCCAATGGCGAATACG
TGGACGCCATCCAGTACTACAAGGACTTCAGCACTTGCTGAAACTTCCCT
GGCCGCTCCAGCCACATCTGCAATGCCGGATTCCTCTCTCATGCCGAGGC
CCAGGGCCGGGGGGTGGGCCGCTTCATGTCGACCTGGTTCGTGCCGCTTG
CCAAGGAGCTGGCCTACCAGGCGTCTTTCTTCAACCTGGTTTACAAGACT
AATGCCAGGAGCCATGCCCTCTGGGAGAGCATGGGCTACACGGTGATCGG
CACCGTGCCTCGCGCTGGACGGCTCTCCAATGGCGAATACGTGGACGCCA
TCCAGTACTACAAGGACTTCAGCACTTGCTGA
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