mRNA_M-pyrifera_M_contig112112.2547.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A0A517PVN3_9PLAN (Aerobic cobaltochelatase subunit CobN n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PVN3_9PLAN) HSP 1 Score: 394 bits (1011), Expect = 2.110e-125 Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 1
Query: 1 APTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGERVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDVVSDAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHAL 585
APTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGERVMSGREAIVLELLSRYHNPEFI EMQKEGFDGARYFSRIADNQFGWDVVSDAITADDWNKYSQIYLDDKYD GLQKFFNEHNPHAL
Sbjct: 1018 APTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGERVMSGREAIVLELLSRYHNPEFITEMQKEGFDGARYFSRIADNQFGWDVVSDAITADDWNKYSQIYLDDKYDLGLQKFFNEHNPHAL 1212
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: F0SHE5_RUBBR (Magnesium chelatase n=1 Tax=Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / IAM 15109 / NBRC 103401 / IFAM 1448) TaxID=756272 RepID=F0SHE5_RUBBR) HSP 1 Score: 319 bits (817), Expect = 5.600e-98 Identity = 147/195 (75.38%), Postives = 175/195 (89.74%), Query Frame = 1
Query: 1 APTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGERVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDVVSDAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHAL 585
AP GQYGTGVHHFVNASQQWS+ S+VA QYL RM+NSFS GW+QPG+KIF+QQLSGVQ VIHGRSSNLYG+MD+TENFEYQGALALSV ++DG+QPDLYINDL+ V+ GREAIVLELLSRYHNP+FI M++EGFDGA+YFSRIADNQFGWDVV+D ITA+DW +++IYL+D+Y+ GL++FF +HNPHAL
Sbjct: 1004 APMGQYGTGVHHFVNASQQWSEPSQVADQYLSRMANSFSQTGWAQPGQKIFKQQLSGVQAVIHGRSSNLYGIMDITENFEYQGALALSVEQLDGKQPDLYINDLVGTNEVLDGREAIVLELLSRYHNPDFITSMKQEGFDGAKYFSRIADNQFGWDVVTDLITAEDWQDFTEIYLEDRYELGLKEFFEQHNPHAL 1198
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A0A7J4EDZ4_9EURY (Cobaltochelatase subunit CobN n=3 Tax=Archaea TaxID=2157 RepID=A0A7J4EDZ4_9EURY) HSP 1 Score: 162 bits (411), Expect = 8.190e-43 Identity = 81/195 (41.54%), Postives = 124/195 (63.59%), Query Frame = 1
Query: 10 GQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLI--RGERVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFS-RIADNQFGWDVVS-DAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHA 582
G YGTG+ + ++AS W +++++A Y+ RM S+ GW P +FRQ L+ V G +H RS+N+YGV+D + F++ G LAL+V I G+ PDLYI +L + + + + EL +RY NP++I M + G+ GARY + +N +GWDVV+ D IT D WN+ +Y+ DKYD GL +FF+ +NP+A
Sbjct: 1164 GNYGTGLENAISASNTWENETKLADLYISRMGYSYGVDGWGVPNADLFRQNLAEVDGAVHSRSTNIYGVLDTDDCFQHLGGLALAVRSITGENPDLYITNLRDPHDPKTETLKSFLRRELNARYFNPKWIESMMEHGYAGARYMDHKFLENLWGWDVVTPDLITEDMWNQVYDVYIQDKYDLGLNEFFDSNNPYA 1358
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A0A7Z9WHD4_9DELT (Cobaltochelatase subunit CobN n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Z9WHD4_9DELT) HSP 1 Score: 150 bits (379), Expect = 3.000e-39 Identity = 79/195 (40.51%), Postives = 116/195 (59.49%), Query Frame = 1
Query: 10 GQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIR--GERVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDV-VSDAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHAL 585
G YGTG+ + + AS W + S++A Y+ R+ + GW IFRQ L+ V+ H SSNLYGV+D + F+Y G LAL+V I G+ PDLY+ +L + + + E+ +RY NP++I M + + GAR + + +GWDV V D IT D WN+ IY+ DKY+ GL++FFNE+NP+AL
Sbjct: 199 GTYGTGLPNAIAASNTWDNDSKLANLYISRLGYIYGADGWGAQNVDIFRQNLANVEVATHSDSSNLYGVLDNDDYFQYLGGLALAVRSITGKTPDLYVTNLKNPNNPKTENLNSYLRQEIRARYFNPKWIKGMMEHDYAGAREMDKFLEYMWGWDVTVPDLITEDMWNEVYDIYIQDKYNLGLKEFFNENNPYAL 393
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: F7XLJ7_METZD (Cobaltochelatase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) TaxID=679901 RepID=F7XLJ7_METZD) HSP 1 Score: 151 bits (381), Expect = 8.740e-39 Identity = 76/194 (39.18%), Postives = 116/194 (59.79%), Query Frame = 1
Query: 10 GQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGE--RVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDVVS-DAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHA 582
G YGTG+ ++AS W +++E+A ++ +MSN + W E I R L V IH RSSNLYG D + F Y G L L+V + G P++YI +L R+ + RE++ EL +RY NP+++ M + + GAR F + ++ +GW+VV+ D I+ DWN+ IY++DKYD G+ +FF + NPHA
Sbjct: 1152 GSYGTGLSEAIDASDTWDNENELADLFISKMSNIYGKEIWGDSYESILRLNLMNVDSAIHSRSSNLYGHFDNDDVFSYLGGLGLAVRSVTGSNPEMYIAELQNPNDLRIATLRESMRTELRARYFNPQWVEGMMEHDYAGAREFMKFTEHMWGWNVVTPDLISDSDWNEIYDIYVEDKYDLGVNEFFKDANPHA 1345
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A0A842XF16_9EURY (Cobaltochelatase subunit CobN n=1 Tax=Methanophagales archaeon TaxID=2056316 RepID=A0A842XF16_9EURY) HSP 1 Score: 150 bits (378), Expect = 2.180e-38 Identity = 78/196 (39.80%), Postives = 122/196 (62.24%), Query Frame = 1
Query: 4 PTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIR--GERVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDV-VSDAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHA 582
P G YGT + V AS W D++++A Y++R+S+ + W +F + L GV +H +SSNLYGVMD + F+Y G LAL+V G+ PDLYI++ GE++ + + E +RY +P++I M++EG+ GAR ++ ++Q+GWDV V + IT WN+ ++Y+ DKYD GL++FF E NP+A
Sbjct: 989 PPGAYGTNLDDAVAASSTWEDETKLANLYIKRLSHVYGEATWGNQHAGVFEENLKGVDVAVHSQSSNLYGVMDNDDYFQYLGGLALAVRNTKGETPDLYISNQRNPGGEKIDALSNYLTREQRARYFSPKWITGMKEEGYAGAREMAKFVEHQWGWDVMVPELITERMWNETYEVYVKDKYDLGLKEFF-EANPYA 1183
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A0A520K4V9_9EURY (Cobaltochelatase subunit CobN n=1 Tax=Methanophagales archaeon ANME-1-THS TaxID=2491082 RepID=A0A520K4V9_9EURY) HSP 1 Score: 150 bits (378), Expect = 2.210e-38 Identity = 77/195 (39.49%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 10 GQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLI--RGERVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDVVS-DAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHAL 585
G YGTG+ + + AS W + +++A Y+ RM + GW P +FRQ L+ V+ +H +SNLYGV+D + F+Y G LAL+V I G+ PDLY+ +L + + + EL +RY NP+++ M + + GAR + +N +GWDVV+ D IT D WN+ IY+ DKY+ GL++FF+ +NP+AL
Sbjct: 1152 GTYGTGLPNAIAASDTWMNGTKLANLYISRMGYVYGEDGWGVPNVDLFRQNLAKVEVAVHSDNSNLYGVLDNDDFFQYLGGLALAVRSITGETPDLYVTNLRDPHNPKTETLESYLRRELRARYFNPKWLEGMMEHDYAGAREMMKFIENLWGWDVVTPDLITQDIWNQVYDIYVQDKYNLGLKEFFDSNNPYAL 1346
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A0A101IJQ9_9EURY (Magnesium chelatase n=3 Tax=Methanothrix TaxID=2222 RepID=A0A101IJQ9_9EURY) HSP 1 Score: 147 bits (372), Expect = 1.410e-37 Identity = 78/197 (39.59%), Postives = 121/197 (61.42%), Query Frame = 1
Query: 1 APTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGERV-MSGRE-AIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDV-VSDAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHA 582
AP G G+ V+AS W ++S+VA +Y+ + G W +P E++F L V +H SSNLYG+MD + F+Y GA+AL+V + G+ P++YI DL + V M E A LEL +RY NP +I M + + GAR R A++ +GWDV V + ++ +DW++ +Y+ DKY+ G+Q+FF+E+NP+A
Sbjct: 1187 APGTYGGGGIAEVVDASSTWENESKVADRYISGQGYVYGGGLWGEPNEELFGLNLETVDVAVHSDSSNLYGLMDNDDVFQYFGAMALAVRSLKGETPEMYITDLASTDEVEMKPLEGAYRLELRARYFNPRWIEGMMEHDYAGAREMDRFAEHLWGWDVTVPEMVSEEDWDRVYDVYVADKYELGIQEFFDENNPYA 1383
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A0A5K8AJ01_9DELT (Uncharacterized protein n=3 Tax=Desulfosarcina ovata TaxID=83564 RepID=A0A5K8AJ01_9DELT) HSP 1 Score: 146 bits (368), Expect = 4.750e-37 Identity = 72/198 (36.36%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 APTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGE--RVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDVVS-DAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHAL 585
AP YGTG++ + AS W ++A Y+ RM+ ++ W + + F+Q L G V+H RS+NL+GV+D + ++Y G LA++V + G+ PDL+I D +++ +A+ LE+ +R NP++I MQK G+ GAR ++ A+N +GW VV+ D ++ + W + Q+Y+ DKY L++FF +++PHAL
Sbjct: 866 APNQGYGTGLNEAIPASGTWEKDDKLADLYINRMNYAYGRNVWGKKSQDAFKQALKGTDMVVHSRSTNLFGVVDNDDVYQYMGGLAMAVRNVSGETPDLFIADAKNPSDPKMVDFAKALGLEVRARNFNPKWIEGMQKNGYSGAREMAKFAENLWGWQVVTPDEVSKEMWEQTYQVYVADKYGMKLKEFFEKNSPHAL 1063
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Match: A6USS8_METVS (Cobaltochelatase n=1 Tax=Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB) TaxID=406327 RepID=A6USS8_METVS) HSP 1 Score: 146 bits (368), Expect = 4.870e-37 Identity = 75/194 (38.66%), Postives = 120/194 (61.86%), Query Frame = 1
Query: 10 GQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIFRQQLSGVQGVIHGRSSNLYGVMDLTENFEYQGALALSVAEIDGQQPDLYINDLIRGE--RVMSGREAIVLELLSRYHNPEFIAEMQKEGFDGARYFSRIADNQFGWDVVS-DAITADDWNKYSQIYLDDKYDHGLQKFFNEHNPHA 582
G YGTG+ ++AS W ++ ++A YL RMS+ + G W + + +FR + + +H RSSNLYG+MD + F+Y GAL L+ + G+ DLYI +L +V + +EA+ EL SRY NP++I M + + GAR F + + +GW+VV+ D I+ +DWN+ +IY++DKY G+ +F + NP+A
Sbjct: 1153 GSYGTGLSEAISASNTWDNEDKLAELYLSRMSHVYGKGTWGEGYKDVFRLNILNMDAAVHSRSSNLYGLMDNDDVFQYLGALQLTKRSLTGENIDLYIANLANPNDMKVNTLQEALRTELRSRYLNPKWIEGMMEHDYAGAREFMKFTEYMWGWNVVTPDLISDNDWNELHKIYVEDKYGIGVNEFMKDANPYA 1346 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112112.2547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112112.2547.1 >prot_M-pyrifera_M_contig112112.2547.1 ID=prot_M-pyrifera_M_contig112112.2547.1|Name=mRNA_M-pyrifera_M_contig112112.2547.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp APTGQYGTGVHHFVNASQQWSDQSEVAGQYLQRMSNSFSNGGWSQPGEKIback to top mRNA from alignment at M-pyrifera_M_contig112112:2..586- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112112.2547.1 ID=mRNA_M-pyrifera_M_contig112112.2547.1|Name=mRNA_M-pyrifera_M_contig112112.2547.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig112112:2..586- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112112:2..586- >mRNA_M-pyrifera_M_contig112112.2547.1 ID=mRNA_M-pyrifera_M_contig112112.2547.1|Name=mRNA_M-pyrifera_M_contig112112.2547.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig112112:2..586- (Macrocystis pyrifera P11B4 male)back to top |