mRNA_M-pyrifera_M_contig112094.2539.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A5C6FWD5_9PLAN (Succinate-semialdehyde dehydrogenase [NADP(+)] 1 n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A5C6FWD5_9PLAN) HSP 1 Score: 333 bits (855), Expect = 5.630e-111 Identity = 163/195 (83.59%), Postives = 180/195 (92.31%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVAI 585
LLK+AGVP+GVHTNLQLSARNA IIDDDR+QGV+FTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDAD++ T+ERF FGKLHATGQICIAAKRIILVESIAQ+FLD TK F +LEPGDP+DESTGYGPVCNEKAAIQLE Q+ ESV AGA++L GGKR+GAFI+PTI+TDIP SPA CEELFGPVA+
Sbjct: 177 LLKDAGVPEGVHTNLQLSARNAGSIIDDDRVQGVAFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADMDATIERFKFGKLHATGQICIAAKRIILVESIAQEFLDRATKLFASLEPGDPLDESTGYGPVCNEKAAIQLEEQINESVAAGAKLLVGGKRDGAFIQPTIMTDIPKGSPADCEELFGPVAL 371
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A5C5V381_9BACT (Succinate-semialdehyde dehydrogenase [NADP(+)] 1 n=5 Tax=Planctomycetes TaxID=203682 RepID=A0A5C5V381_9BACT) HSP 1 Score: 315 bits (806), Expect = 1.480e-103 Identity = 154/195 (78.97%), Postives = 175/195 (89.74%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVAI 585
LLK+AGVP+GVHTNLQLSARNA IIDDDR+ GV+FTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVL+DAD++ T+ERFM GKL GQICIAAKRIIL ESIA++FL+ TKRF L+PGDP+D++TGYGPVCNEKAAIQLE+Q+ +SV AGA+IL GG R+GAFIEPTI+TDIP SPA CEELFGPVAI
Sbjct: 178 LLKDAGVPEGVHTNLQLSARNAGSIIDDDRVVGVAFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLDDADMDATIERFMIGKLLCAGQICIAAKRIILDESIAEEFLNRATKRFAELKPGDPLDQATGYGPVCNEKAAIQLEKQINDSVAAGAKILVGGNRDGAFIEPTIMTDIPKGSPADCEELFGPVAI 372
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A2S1JSM8_9GAMM (Succinate-semialdehyde dehydrogenase n=1 Tax=Microbulbifer sp. A4B17 TaxID=359370 RepID=A0A2S1JSM8_9GAMM) HSP 1 Score: 281 bits (718), Expect = 2.110e-90 Identity = 140/194 (72.16%), Postives = 166/194 (85.57%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVA 582
LL +AGVP+GV+TNL +++ AA IIDDDR++G+SFTGSN GA VAEQAGRNVKKTVMELGGVDPFIVLEDAD++ T++RF GKL GQIC+AAKRIIL E IA++FLD TK F+AL+PGDP+ EST YGP+C EKAA QLE QV++SVKAGA++L GGKRNGAFIEP ILT+IPA SPAA EELFGP+A
Sbjct: 174 LLFDAGVPEGVYTNLPITSGGAASIIDDDRVKGISFTGSNAAGAMVAEQAGRNVKKTVMELGGVDPFIVLEDADMDLTIQRFAEGKLGNCGQICLAAKRIILTEPIAEEFLDRATKLFQALKPGDPLVESTDYGPLCTEKAAEQLEDQVSKSVKAGAQLLVGGKRNGAFIEPGILTEIPAGSPAAVEELFGPIA 367
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A1M4UUQ2_9GAMM (Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase n=1 Tax=Microbulbifer donghaiensis TaxID=494016 RepID=A0A1M4UUQ2_9GAMM) HSP 1 Score: 278 bits (711), Expect = 2.020e-89 Identity = 137/194 (70.62%), Postives = 164/194 (84.54%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVA 582
L+++AG P+G +TNL +SAR A +IDDDR+QGVSFTGSN GGA VAEQAGRNVKKTVMELGGVDPFIVL+DAD++ TVERF+ GKL +GQICIAAKRIILVESIA +FL VTKRF+ L+ GDP+DESTGYGP+C EKAAI++E Q+ SV +GA + GGKR+GAFIEPTILT+I +PA EE+FGPVA
Sbjct: 169 LMRDAGAPEGTYTNLVVSARGAGVVIDDDRVQGVSFTGSNAGGAKVAEQAGRNVKKTVMELGGVDPFIVLDDADMDVTVERFLEGKLSCSGQICIAAKRIILVESIADEFLTRVTKRFQELKAGDPLDESTGYGPLCTEKAAIEVEDQINRSVASGATVTVGGKRDGAFIEPTILTNIGRGTPAFDEEIFGPVA 362
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A5P9EX49_9GAMM (Succinate-semialdehyde dehydrogenase [NADP(+)] 1 n=2 Tax=Microbulbifer TaxID=48073 RepID=A0A5P9EX49_9GAMM) HSP 1 Score: 273 bits (697), Expect = 3.080e-87 Identity = 138/194 (71.13%), Postives = 161/194 (82.99%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVA 582
LL +AGVP GV+TNL +++ AA IIDDDR++G+SFTGSN GA VAEQAGRNVKKTVMELGGVDPFIVLEDAD++ TVERF+ GKL GQIC+AAKRIIL E IA +FL VTK F+ L+PGDP+ ++T YGP+C EKAA LE QV++SV AGA +L GGKRNGAFIEP ILTDIPA SPAA EELFGP+A
Sbjct: 174 LLFDAGVPKGVYTNLPITSAGAAPIIDDDRVKGISFTGSNDAGAKVAEQAGRNVKKTVMELGGVDPFIVLEDADMDLTVERFVEGKLGNCGQICLAAKRIILTEPIADEFLGRVTKLFKELKPGDPLKDTTDYGPLCTEKAAEHLEEQVSKSVAAGAHLLVGGKRNGAFIEPGILTDIPAGSPAAEEELFGPIA 367
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: UPI001867225A (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Microbulbifer hainanensis TaxID=2735675 RepID=UPI001867225A) HSP 1 Score: 271 bits (694), Expect = 5.800e-86 Identity = 134/194 (69.07%), Postives = 160/194 (82.47%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVA 582
LL +AGVP+GV TNL +S+ NA+ IIDD R++G+SFTGSN GGA VAEQAGRNVKKTVMELGG DPFIVLEDADLEKT++ F+ KL GQ+CIA KRIIL +IAQQF+D V K+F EPGDP+DESTGYGP+C+E AA +LE Q+ S+ AGA+++ GGKR+GAFI+PTILTDIP PAA EELFGPVA
Sbjct: 243 LLHDAGVPEGVFTNLLVSSGNASMIIDDPRVRGISFTGSNAGGARVAEQAGRNVKKTVMELGGADPFIVLEDADLEKTIDHFVEAKLGNAGQVCIAPKRIILTAAIAQQFIDGVAKKFSEREPGDPLDESTGYGPLCSEDAAKKLEDQIQRSIDAGAKLVFGGKRDGAFIQPTILTDIPPGCPAAEEELFGPVA 436
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A5S3YWV3_9GAMM (Succinate-semialdehyde dehydrogenase n=2 Tax=Pseudoalteromonas phenolica TaxID=161398 RepID=A0A5S3YWV3_9GAMM) HSP 1 Score: 253 bits (647), Expect = 8.710e-80 Identity = 126/194 (64.95%), Postives = 155/194 (79.90%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVA 582
++ +AG P+GV+TNL +S+RNA IIDDDR+QGVSFTGSN GA VAEQAGRNVKKTVMELGGVDPFIVL+DA+L+KT E F K+ +GQICI+ KRIILVESIA++FL+ V + L PGDP E YGP+ EKAAI +E Q+ +SV+ GA++L GGKR GAFI+PTILTDIP+ +PA EE+FGPVA
Sbjct: 169 IMIDAGTPEGVYTNLVVSSRNAGAIIDDDRVQGVSFTGSNAAGAKVAEQAGRNVKKTVMELGGVDPFIVLDDANLDKTAEYLAFTKMLCSGQICISPKRIILVESIAEEFLNKVKAHLQELTPGDPTKEGYHYGPLSTEKAAIDVEAQIKKSVEGGAKLLLGGKREGAFIQPTILTDIPSGTPAFDEEIFGPVA 362
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A4Q0Y0I1_9PROT (Succinate-semialdehyde dehydrogenase n=1 Tax=Halarcobacter anaerophilus TaxID=877500 RepID=A0A4Q0Y0I1_9PROT) HSP 1 Score: 231 bits (588), Expect = 6.230e-71 Identity = 115/194 (59.28%), Postives = 147/194 (75.77%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKRNGAFIEPTILTDIPAASPAACEELFGPVA 582
++ +AG P GV+TN+ +S +NA +I DDR+QGVSFTGSN G+ VAEQAG+NVKKTV+ELGG DPFIVLEDA++EKT + K+ +GQICI+ KRIIL+ESIA+ FL + ++ LE GDP E YGP+CNEKAAI +E Q+ +SV+ GA +L GG+RN AFI PTILT+IP PA EE+FGPVA
Sbjct: 169 IMLDAGAPKGVYTNVVVSGKNAGIVIADDRVQGVSFTGSNIAGSKVAEQAGKNVKKTVLELGGTDPFIVLEDANIEKTADYLAETKMLGSGQICISPKRIILIESIAENFLSRLKEKLGNLEAGDPSVEGEHYGPLCNEKAAIDVENQIKKSVEGGAILLLGGERNNAFISPTILTNIPKGVPAFEEEIFGPVA 362
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: UPI001980F791 (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Paludisphaera soli TaxID=2712865 RepID=UPI001980F791) HSP 1 Score: 229 bits (585), Expect = 1.890e-70 Identity = 116/197 (58.88%), Postives = 149/197 (75.63%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKR---NGAFIEPTILTDIPAASPAACEELFGPVA 582
L +AG P G +TNL SAR A+R+IDDDR+QGVSFTGS+ GA VAE+AG+NVKKTV+ELGG DPFIVLEDAD++ TVER +FG+++ GQ C+A+KR IL+E ++++F++ ++ AL+ GDP DESTG PV + +AA QL+ QV SV AGAR++ GG R GAF EPTILTD+ PA EELFGPVA
Sbjct: 168 LFHDAGFPPGAYTNLVASARLASRVIDDDRVQGVSFTGSDDAGARVAERAGKNVKKTVLELGGSDPFIVLEDADMDLTVERAVFGRMNNMGQSCVASKRFILLEKVSEEFVERFREKLAALKMGDPQDESTGVAPVSSAQAAAQLKDQVDRSVAAGARLILGGNRPVPEGAFFEPTILTDVKKGMPAYDEELFGPVA 364
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Match: A0A1H5GPA1_9BRAD (Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase n=2 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1H5GPA1_9BRAD) HSP 1 Score: 218 bits (556), Expect = 8.920e-66 Identity = 108/197 (54.82%), Postives = 147/197 (74.62%), Query Frame = 1
Query: 1 LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAGRNVKKTVMELGGVDPFIVLEDADLEKTVERFMFGKLHATGQICIAAKRIILVESIAQQFLDAVTKRFEALEPGDPMDESTGYGPVCNEKAAIQLERQVTESVKAGARILTGGKR---NGAFIEPTILTDIPAASPAACEELFGPVA 582
L ++A P G +TNL ++A A +++DDDR+QGVSFTGS+ GA VAE+AGR VKKT+MELGG DPF+VL+DAD++ T++R +FGK+ GQ C+AAKR IL++S++ +F+D +R AL+ GDP+DESTG P+ + KAA +LE QV SV GA ++ GGKR + AF EPTILT++ +PA EELFGPVA
Sbjct: 198 LFRDASFPTGAYTNLVVTAGLANKVVDDDRVQGVSFTGSDTSGARVAERAGRYVKKTIMELGGSDPFVVLDDADMKLTIDRAVFGKMTNMGQSCVAAKRFILLQSVSDEFVDGFRERLAALKMGDPLDESTGVAPLSSVKAAARLEDQVNRSVAGGAHVVLGGKRPSPDSAFFEPTILTNVKKGTPAYDEELFGPVA 394 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112094.2539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112094.2539.1 >prot_M-pyrifera_M_contig112094.2539.1 ID=prot_M-pyrifera_M_contig112094.2539.1|Name=mRNA_M-pyrifera_M_contig112094.2539.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp LLKEAGVPDGVHTNLQLSARNAARIIDDDRIQGVSFTGSNKGGAAVAEQAback to top mRNA from alignment at M-pyrifera_M_contig112094:2..586+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112094.2539.1 ID=mRNA_M-pyrifera_M_contig112094.2539.1|Name=mRNA_M-pyrifera_M_contig112094.2539.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig112094:2..586+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112094:2..586+ >mRNA_M-pyrifera_M_contig112094.2539.1 ID=mRNA_M-pyrifera_M_contig112094.2539.1|Name=mRNA_M-pyrifera_M_contig112094.2539.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig112094:2..586+ (Macrocystis pyrifera P11B4 male)back to top |