mRNA_M-pyrifera_M_contig111970.2509.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A354BA16_9ACTN (MFS transporter n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354BA16_9ACTN) HSP 1 Score: 270 bits (690), Expect = 1.580e-86 Identity = 141/192 (73.44%), Postives = 164/192 (85.42%), Query Frame = 1
Query: 4 RPTLRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAALYPV 579
+P+L ESF ++ T+RLA IAV AMA+GQ VMVAVMTVTPLHM++GAHE ++IGLVISLHIVGMY F+P+VGWLVDRLP +V AGL LF+G E+ASHTDPED GVF GL L+G+GWSFAMISGSALLT AF A ERA++QGAADFTM A+GA GL SGV+VEASS+HALSHWA V AL+LVAAALYPV
Sbjct: 226 KPSLAESFGKLVTHRLAAIAVFAMAVGQGVMVAVMTVTPLHMDEGAHETRVIGLVISLHIVGMYFFSPLVGWLVDRLPVVLMVGAAGLILFLGAEMASHTDPEDSLGVFVGLLLVGIGWSFAMISGSALLTSAFSASERASVQGAADFTMVASGATGGLLSGVIVEASSYHALSHWAAVLALSLVAAALYPV 417
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A7X5WSW0_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WSW0_9ACTN) HSP 1 Score: 261 bits (667), Expect = 1.900e-86 Identity = 135/171 (78.95%), Postives = 154/171 (90.06%), Query Frame = 1
Query: 73 MALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAALYPVVT 585
MA+GQAVMVA+MTVTPLHM+DG HE +IIGLVISLHIVGMY FAP+VGWLVDRLP++ I+ AG+TLFIG E ASHTDPED AGVF GLFLIG+GWSFAMISGSALLT +F A +RAA+QGAADFTM +GA AG+ASGV+VEASS+H LSHWAGVAAL+LVAAA+YPVVT
Sbjct: 1 MAVGQAVMVAIMTVTPLHMDDGRHETQIIGLVISLHIVGMYFFAPIVGWLVDRLPTALILTAAGITLFIGAETASHTDPEDSAGVFVGLFLIGVGWSFAMISGSALLTASFPAHQRAAVQGAADFTMVFSGAVAGVASGVIVEASSYHGLSHWAGVAALSLVAAAVYPVVT 171
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A7K1Z978_9ACTN (MFS transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z978_9ACTN) HSP 1 Score: 270 bits (689), Expect = 1.990e-86 Identity = 141/194 (72.68%), Postives = 167/194 (86.08%), Query Frame = 1
Query: 4 RPTLRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAALYPVVT 585
+P L +SF I +++A+IAVGAMA+GQAVMVA+MTVTPLHM+DG HE +IIGLVISLHIVGM+ FAP+VGW VDRLP+ +VA AG+ LF+GGE+ASHTDP D GVF GLFLIGLGWSFAMI+GS+LLTG+F A ERA +QGAADFTM A+GA AGLASGV+VE SSF +LSHWAGVAAL+LV AALYP+ T
Sbjct: 228 KPRLVDSFTAIARHQMALIAVGAMAVGQAVMVAIMTVTPLHMDDGHHETQIIGLVISLHIVGMFFFAPIVGWFVDRLPTEAMVAAAGVILFVGGEMASHTDPADSLGVFVGLFLIGLGWSFAMIAGSSLLTGSFPAHERANVQGAADFTMVASGAVAGLASGVIVEQSSFGSLSHWAGVAALSLVVAALYPLAT 421
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A346XVW9_9ACTN (Major facilitator superfamily MFS_1 n=3 Tax=Euzebya TaxID=908623 RepID=A0A346XVW9_9ACTN) HSP 1 Score: 194 bits (492), Expect = 1.100e-56 Identity = 101/184 (54.89%), Postives = 132/184 (71.74%), Query Frame = 1
Query: 34 IGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAALYPVVT 585
I N A +A G M +GQAVM VMT TPLHM GAHE +++G VIS+HI+GMY+FAPVVGW VDR+ ++A+ G+ LF+GGE+ASHT ED GVF GLFLIG+GWS +++GS +LT AF ER +QGAAD M+ +GA A L++GV+ + SS+ LSH AG+ AL + AAAL + T
Sbjct: 252 IAANPAARLAAGGMVVGQAVMTGVMTATPLHMRSGAHELQVVGFVISVHIIGMYVFAPVVGWAVDRIGPRAVLALGGVALFVGGEMASHTRAEDSMGVFVGLFLIGIGWSCGLVAGSTMLTAAFPPLERVGVQGAADLLMSGSGALASLSAGVIYQLSSYADLSHLAGLLALTITAAALVSIAT 435
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A2D6PEB2_9ACTN (MFS transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6PEB2_9ACTN) HSP 1 Score: 193 bits (490), Expect = 1.440e-56 Identity = 105/188 (55.85%), Postives = 131/188 (69.68%), Query Frame = 1
Query: 7 PTLRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAAL 570
P LR S + + +AV M G VMV VMT+TPLHM DG H+ ++IGLVISLH++GMY F+PVVGW D L S ++A G+ LFIG EL SHTDPE G++ GLFLIGLGWS +++GSALLTG+F + R +QG AD MTA+GAAAGLASG+VV + F +LSHW+GV LA A L
Sbjct: 221 PNLRASTRLLACSPHGRLAVIGMVAGHIVMVGVMTMTPLHMRDGNHDLQVIGLVISLHVIGMYAFSPVVGWFADHLGSRPVLAGGGVMLFIGAELTSHTDPEHSIGIYAGLFLIGLGWSCGIVAGSALLTGSFPPESRVQVQGLADLVMTASGAAAGLASGLVVTWAGFGSLSHWSGVLGLAPTVAVL 408
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A6B1C981_9ACTN (MFS transporter n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1C981_9ACTN) HSP 1 Score: 190 bits (482), Expect = 2.040e-55 Identity = 102/182 (56.04%), Postives = 130/182 (71.43%), Query Frame = 1
Query: 13 LRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALV 558
LR RI T A +AV AM GQAVMV VMT+TPLHM++G H ++IG VIS+H++GM+ F+P+VGWLVDR+ +V + G+ L IG E A+H ED AG+F GL L+GLGWSF +I+GSALLT AF +R +QG AD MT GA AGL+SGV +E FH+LSHWAG++AL LV
Sbjct: 216 LRVVGRRIATVPAARLAVIAMLTGQAVMVGVMTMTPLHMDNGDHHLRVIGWVISVHVIGMFAFSPIVGWLVDRIGPYLMVGLGGVILCIGAETAAHNSAEDSAGMFAGLLLVGLGWSFGLIAGSALLTAAFPVAQRVEMQGGADLLMTGGGAVAGLSSGVAMEHFGFHSLSHWAGLSALLLV 397
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A7K2DG01_9ACTN (MFS transporter n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DG01_9ACTN) HSP 1 Score: 189 bits (479), Expect = 5.980e-55 Identity = 102/179 (56.98%), Postives = 130/179 (72.63%), Query Frame = 1
Query: 31 RIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAA 567
RI A +A+ AM +GQ VMVAVMT TPLHM G + +IG VISLHIVGMY F+P+VGWLVDRL + ++ + GL LF+G ELA HTDPE AG+F+GL LIG+GWS +I+GSALLT +F ++R +QG ADF M GA G++SG +VE F +LSH++G+AAL LVAAA
Sbjct: 229 RIAAVPAARLALLAMLVGQMVMVAVMTATPLHMTSGDQDIAVIGQVISLHIVGMYAFSPIVGWLVDRLGTHTVITLGGLILFLGAELAGHTDPEHSAGLFSGLTLIGIGWSCGLIAGSALLTNSFPVRQRVEVQGGADFVMITGGAVGGMSSGALVELLGFQSLSHYSGIAALVLVAAA 407
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A6N8YBX4_9ACTN (MFS transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YBX4_9ACTN) HSP 1 Score: 187 bits (476), Expect = 1.670e-54 Identity = 102/186 (54.84%), Postives = 130/186 (69.89%), Query Frame = 1
Query: 10 TLRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAA 567
T+ A + RLA++A M +GQ VMV VMT TPLHM G + +IG VISLHI+GMY F+P+VGWLVDRL + +V + GL LF+G ELA HTDPE AG+F+GL LIG+GWS +I+GS LLT AF +R +QG ADF M GA G++SG +VE F +LSH++G+AAL LVAAA
Sbjct: 225 TVIRRIAAVPAARLALLA---MLIGQLVMVGVMTATPLHMTSGDQDLAVIGQVISLHIIGMYAFSPIVGWLVDRLGTHTVVTLGGLILFVGAELAGHTDPEHSAGLFSGLTLIGIGWSCGLIAGSTLLTNAFPVHQRVEVQGGADFVMITGGAVGGMSSGALVELLGFQSLSHYSGIAALMLVAAA 407
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A2E7S6Q7_9CHLR (MFS transporter n=2 Tax=Terrabacteria group TaxID=1783272 RepID=A0A2E7S6Q7_9CHLR) HSP 1 Score: 186 bits (473), Expect = 4.160e-54 Identity = 93/195 (47.69%), Postives = 137/195 (70.26%), Query Frame = 1
Query: 1 ERPTLRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAALYPVVT 585
++ + +E+F ++ ++R+ ++VG+M +G VMV VMT+TPLH++DG H+ +I+G VISLHI+GMY F+P+VG L ++ + ++A+ GL L +G ELASH DPED AGVF GLFLIGLGWSF +++ S L+ F E+ IQG AD MTA+G AG+ SG+VV + + LSH++G+ L YPV+T
Sbjct: 220 QKTSFKEAFRKLFSSRVGRLSVGSMVVGHVVMVGVMTMTPLHLKDGGHQLEIVGFVISLHIIGMYAFSPLVGVLTQKIGAKSVIALGGLLLVVGAELASHADPEDSAGVFVGLFLIGLGWSFGLVASSTLIASEFKGSEKVRIQGLADLAMTASGGIAGIGSGLVVTLTDYQTLSHYSGILGL-------YPVIT 407
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Match: A0A381Z8H7_9ZZZZ (MFS domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381Z8H7_9ZZZZ) HSP 1 Score: 186 bits (473), Expect = 4.670e-54 Identity = 98/189 (51.85%), Postives = 129/189 (68.25%), Query Frame = 1
Query: 4 RPTLRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKKIIGLVISLHIVGMYLFAPVVGWLVDRLPSSFIVAVAGLTLFIGGELASHTDPEDRAGVFTGLFLIGLGWSFAMISGSALLTGAFGAQERAAIQGAADFTMTAAGAAAGLASGVVVEASSFHALSHWAGVAALALVAAAL 570
R R +F + + +AVG+M GQ VMVAVMT+TPLHM+DG H+ ++IG VISLHI+GMY +P+VGWL DR+ ++AV G+ L +G E ASHTDPE GVFTGLFLIGLGWSF +++ S+L+ F +R +QG AD MTA+G AGL SG+VV + F LSH++G+ L AA L
Sbjct: 221 RVPFRVAFRSLVASGPGRLAVGSMVAGQVVMVAVMTMTPLHMKDGGHQLELIGFVISLHIIGMYALSPLVGWLTDRIGPRPVIAVGGMMLIVGSEFASHTDPEHSTGVFTGLFLIGLGWSFGLVASSSLIAATFQGLQRVRVQGLADLMMTASGGLAGLGSGLVVSLTDFRTLSHYSGILGLYPTAAVL 409 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111970.2509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111970.2509.1 >prot_M-pyrifera_M_contig111970.2509.1 ID=prot_M-pyrifera_M_contig111970.2509.1|Name=mRNA_M-pyrifera_M_contig111970.2509.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp ERPTLRESFARIGTNRLAVIAVGAMALGQAVMVAVMTVTPLHMEDGAHEKback to top mRNA from alignment at M-pyrifera_M_contig111970:3..587- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111970.2509.1 ID=mRNA_M-pyrifera_M_contig111970.2509.1|Name=mRNA_M-pyrifera_M_contig111970.2509.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig111970:3..587- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111970:3..587- >mRNA_M-pyrifera_M_contig111970.2509.1 ID=mRNA_M-pyrifera_M_contig111970.2509.1|Name=mRNA_M-pyrifera_M_contig111970.2509.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig111970:3..587- (Macrocystis pyrifera P11B4 male)back to top |