mRNA_M-pyrifera_M_contig111969.2508.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: A0A2H0FSA7_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteriales bacterium CG18_big_fil_WC_8_21_14_2_50_31_20 TaxID=1974047 RepID=A0A2H0FSA7_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 4.030e-6 Identity = 47/151 (31.13%), Postives = 68/151 (45.03%), Query Frame = 1
Query: 58 NNNIKDYKKKKFHHAWCHGSPGIVLSRI-PYYVQTNNI---EKLSTLSSSLVRACKMNHINYSPTICCGIGGIIYSMIELNEKLDKKGIQAIVNSGWGRSLKE-----------------EPSLFKGIAGVGMLMLR-FYKKLDETIVYPN 444
+N Y KK + AWCHG+PGI LSRI Y + +NI E + + ++ + NYS +C GIGG +IE+ LD I + +K+ +PSL G AG+G LR F KK+ ++ N
Sbjct: 281 DNAFSSYNKKLMN-AWCHGAPGIGLSRIRTYKILNDNIYFEETENAIRGTINYLEERIGANYS--LCHGIGGNCDLLIEVANNLDNNSYYKIAEEYGLKGIKDYENLNKKWPCGTMGFVSDPSLMLGEAGIGYFYLRLFSKKVPSVLLITN 428
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: A0A2U1QYG7_9FLAO (Uncharacterized protein n=1 Tax=Flavobacterium sp. HTF TaxID=2170732 RepID=A0A2U1QYG7_9FLAO) HSP 1 Score: 55.1 bits (131), Expect = 6.540e-6 Identity = 42/139 (30.22%), Postives = 66/139 (47.48%), Query Frame = 1
Query: 100 AWCHGSPGIVLSRI------PYYVQTNNIEK-LSTLSSSLVRACKMNHINYSPTICCGIGGIIYSMIELNEKLDKKGIQAIVNSG----------WGRSLKE---EPSLFKGIAGVGMLMLRFY-KKLDETIVYPNLDL 453
AWCHG+PGI +SR+ P V TN + L+T S S+ + N N + +IC GI G +++ ++ +A+ N+G W L P L G+AG G LR + K+ ++++ P L L
Sbjct: 271 AWCHGAPGITISRLKANQLYPDQVFTNEMNTALTTTSKSIYNSLIENLSNTNYSICHGIAGNADIILDCGGTEYQQLAEAVGNAGISKYQDNNIQWSTGLSTGHYTPGLMMGVAGTGYFYLRLFDKEKHKSLLVPQLGL 409
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: UPI001747A8B0 (type 2 lanthipeptide synthetase LanM n=1 Tax=Mucilaginibacter rigui TaxID=534635 RepID=UPI001747A8B0) HSP 1 Score: 55.1 bits (131), Expect = 7.600e-6 Identity = 39/120 (32.50%), Postives = 61/120 (50.83%), Query Frame = 1
Query: 100 AWCHGSPGIVLSRIPYYVQTNNIEKLSTLSSSLVRACKMNHINYSPTICCGIGGIIYSMIELNEKLDK--------KGIQAIVNS----GWGRSLK------EEPSLFKGIAGVGMLMLR 405
AWCHG+PGI L+R+ Y + L + ++L+ A K + ++ + CCG G I +IE L + K + A++N GW ++ E PSLF+G AG+G +LR
Sbjct: 801 AWCHGAPGIGLARLHAYHILKDEALLQDVETALI-ATKKHLLSDTDFYCCGNTGRIDFLIEAAMVLGRPALLQDARKALVALLNRKNNRGWYQTYDVENVGMENPSLFRGTAGIGYTLLR 919
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: A0A495MDE7_9FLAO (Lanthionine synthetase-like protein n=2 Tax=Flavobacterium TaxID=237 RepID=A0A495MDE7_9FLAO) HSP 1 Score: 54.7 bits (130), Expect = 8.880e-6 Identity = 45/128 (35.16%), Postives = 60/128 (46.88%), Query Frame = 1
Query: 100 AWCHGSPGIVLSRIPYY------VQTNNIEK-LSTLSSSLVRAC--KMNHINYSPTICCGIGGIIYSMIE--------LNEKLDKKGIQAIVNS--GWGRSLKE---EPSLFKGIAGVGMLMLRFYKK 417
AWCHG+PGI LSR+ V T +E L+T +SS+ R +N+ NYS +C GI G +++ L E + GIQ N+ W L P L GIAG G LR + K
Sbjct: 270 AWCHGAPGIALSRLKANQVKADAVFTQEMEAALTTTTSSVYRVLTDNLNNTNYS--LCHGIAGNAEILLDCGGTEYHQLAEAIGTAGIQKYQNNRISWPTGLNTGQYTPGLMMGIAGTGYFYLRLFNK 395
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: UPI001AE6D2C2 (hypothetical protein n=1 Tax=Flavobacterium sp. 1355 TaxID=2806571 RepID=UPI001AE6D2C2) HSP 1 Score: 54.7 bits (130), Expect = 8.890e-6 Identity = 42/139 (30.22%), Postives = 66/139 (47.48%), Query Frame = 1
Query: 100 AWCHGSPGIVLSRI------PYYVQTNNIEK-LSTLSSSLVRACKMNHINYSPTICCGIGGIIYSMIELNEKLDKKGIQAIVNSG----------WGRSLKE---EPSLFKGIAGVGMLMLRFY-KKLDETIVYPNLDL 453
AWCHG+PGI +SR+ P V TN ++ L+T S S+ + N N + +IC GI G +++ ++ +A+ N+G W L P L G+AG G LR + K ++++ P L L
Sbjct: 271 AWCHGAPGITISRLKANELHPNTVFTNELKTALTTTSKSIYQNLIENLANTNYSICHGIAGNADIILDCGGTEYQQLAEAVGNAGISKYKDNNIQWSTGLSTGHYTPGLMMGLAGTGYFYLRLFDKNKHKSLLLPQLGL 409
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: A0A0Q5UY90_9FLAO (Uncharacterized protein n=4 Tax=Flavobacterium TaxID=237 RepID=A0A0Q5UY90_9FLAO) HSP 1 Score: 54.3 bits (129), Expect = 1.210e-5 Identity = 51/142 (35.92%), Postives = 64/142 (45.07%), Query Frame = 1
Query: 100 AWCHGSPGIVLSRIP--------YYVQTNNIEKLSTLSSSLVRAC--KMNHINYSPTICCGI----------GGIIYSMIELNEKLDKKGIQAIVNSG--WGRSLKE---EPSLFKGIAGVGMLMLR-FYKKLDETIVYPNL 447
AWCHG+PGI LSR+ +VQ N+ L T +SS+ A +N NYS +C GI GGI Y +L E + GIQ + W L P L GIAG G LR F K +T + P L
Sbjct: 270 AWCHGAPGIALSRLKANQAKADAVFVQEMNVA-LKTTASSIYHALTDNLNTTNYS--LCHGIAGNAEILLDCGGIEYH--QLAEAVGTAGIQKYQKNRIPWPTGLNTGQYTPGLMMGIAGTGYFYLRLFNKNRHKTFLVPGL 406
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: UPI001F19E041 (hypothetical protein n=1 Tax=Fulvivirga sp. W9P-11 TaxID=2904246 RepID=UPI001F19E041) HSP 1 Score: 54.3 bits (129), Expect = 1.330e-5 Identity = 50/170 (29.41%), Postives = 82/170 (48.24%), Query Frame = 1
Query: 10 GFAHSKAFDHLVSEYGNNNIKDYKKKKFHHAWCHGSPGIVLSRIPYYVQTNNIEKLSTLSSSLVRACK-MNHINYSP---TICCGIGGIIYSMIELN------------EKLDKKGIQAI-----VNSGWGRSL-KEEPSLFKGIAGVGMLMLRFYK-KLDE-TIVYPNL 447
GF +++F+ EY + N + ++K AWCHG+PG+ LSRI + + L L+ + + + + +IN P +C G GG ++EL+ EK+ K+ + + NSG+ + K + SLF G AG+G L K K+ TI+ P L
Sbjct: 257 GFYDNESFEIQKKEYLDGNKGFFFQEKDMIAWCHGAPGVGLSRIKAFQVLGKSDYLRDLNRAATKTVESLENINALPGCFVLCHGGGGNALFLMELDRFNNANEYYSLVEKVAKRSLDSYNQYGYYNSGYAFAKDKTDISLFMGDAGIGYFYLLVSKGKISSPTILKPEL 426
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: D2QKP7_SPILD (Lanthionine synthetase C family protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) TaxID=504472 RepID=D2QKP7_SPILD) HSP 1 Score: 54.3 bits (129), Expect = 1.340e-5 Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 1
Query: 1 DFRGFAHSKAFDH-LVSEYGNNNIKDYKKKKFHHAWCHGSPGIVLSRIPYYVQTNNIEKLSTLSSSLVRACK---MNHINYSPTICCGIGG----IIYSMIELNE--------KLDKKGIQAIVNSGWGR--SLKEEP--SLFKGIAGVGMLMLRF-YKKLDETIVYPNL 447
DFR ++SK ++ N ++ + K+KF AWCHG+PGI LSR+ + T N L+ L ++ IN S +C G G +I + + N+ K+ KK +Q G+ R SL ++P +LF G +GVG+ LR + +++YP L
Sbjct: 260 DFRKGSYSKKDENEFRRSLINKDLYPFIKEKFMFAWCHGAPGIGLSRLRAHQITGNKTWLNDLEMAITSTSHDLDNTGIN-SYCLCHGGAGNADLLIEAFLYTNKQDYFEAALKVGKKALQQKEQLGYYRPGSLTDKPDAALFTGTSGVGLFYLRLLFPSSIHSVLYPVL 428
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: A0A0J0YJZ2_9FLAO (Uncharacterized protein n=2 Tax=unclassified Flavobacterium TaxID=196869 RepID=A0A0J0YJZ2_9FLAO) HSP 1 Score: 53.9 bits (128), Expect = 1.640e-5 Identity = 45/142 (31.69%), Postives = 64/142 (45.07%), Query Frame = 1
Query: 100 AWCHGSPGIVLSRI--------PYYVQTNNIEKLSTLSSSLVRACKMNHINYSPTICCGI----------GGIIYSMIELNEKLDKKGIQAIVNSG--WGRSLKE---EPSLFKGIAGVGMLMLRFYKK-LDETIVYPNLDL 453
AWCHG+PGI +SR+ P + NI L+T ++S+ + N + + +IC GI GGI Y +L E + GI N+ W L P L GIAG G LR K ++++ P L L
Sbjct: 271 AWCHGAPGITISRLKANQLDSNPVFTNEMNIA-LATTANSVYQGLMENLTSTNYSICHGIAGNADIMMDCGGIEYQ--QLAEAVGNAGISKYPNNNMQWSTGLSSGQYTPGLMMGIAGTGYFYLRLLNKDKHKSVLLPQLGL 409
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Match: UPI00141EE4CA (hypothetical protein n=1 Tax=Flavobacterium sp. JXAS1 TaxID=2204302 RepID=UPI00141EE4CA) HSP 1 Score: 53.5 bits (127), Expect = 2.230e-5 Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 1
Query: 100 AWCHGSPGIVLSRI--------PYYVQTNNIEKLSTLSSSLVRACKMNHINYSPTICCGIGGIIYSMIELNEKLDKKGIQAIVNSG----------WGRSLKE---EPSLFKGIAGVGMLMLRFYKK-LDETIVYPNLDL 453
AWCHG+PGI +SR+ P +V I L+T ++S+ ++ N N + +IC GI G +++ K ++ +A+ N+G W L P L G+AG G LR K ++++ P L L
Sbjct: 271 AWCHGAPGITISRLKANQLHPDPVFVSEMGIA-LTTTTNSVYQSLMENLTNTNYSICHGIAGNADIIMDCGGKEYQELAEAVGNAGIHKYQNNTIQWPTGLSTGQYTPGLMMGVAGTGYFYLRLLNKDKHKSVLVPQLGL 409 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111969.2508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111969.2508.1 >prot_M-pyrifera_M_contig111969.2508.1 ID=prot_M-pyrifera_M_contig111969.2508.1|Name=mRNA_M-pyrifera_M_contig111969.2508.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp DFRGFAHSKAFDHLVSEYGNNNIKDYKKKKFHHAWCHGSPGIVLSRIPYYback to top mRNA from alignment at M-pyrifera_M_contig111969:5..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111969.2508.1 ID=mRNA_M-pyrifera_M_contig111969.2508.1|Name=mRNA_M-pyrifera_M_contig111969.2508.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig111969:5..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111969:5..526+ >mRNA_M-pyrifera_M_contig111969.2508.1 ID=mRNA_M-pyrifera_M_contig111969.2508.1|Name=mRNA_M-pyrifera_M_contig111969.2508.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig111969:5..526+ (Macrocystis pyrifera P11B4 male)back to top |