mRNA_M-pyrifera_M_contig111769.2458.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A6C7E5M0_ILUCY (Putative FeS assembly protein SufB n=6 Tax=Acidimicrobiales TaxID=84993 RepID=A0A6C7E5M0_ILUCY) HSP 1 Score: 366 bits (940), Expect = 1.180e-123 Identity = 177/193 (91.71%), Postives = 189/193 (97.93%), Query Frame = 1
Query: 7 VRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAEDD 585
VRLIS+KK+EPEWLLEWRLKAYEAW+ M EPDWAKLDIAPIDY+A+SYWAAPK+KPVLDSMDDVDP+IR+MFDKLGIPLHEQK++SNVA+DAIVDSVSVTTTFK TLAEAGVIFCSFSEAV DHPELVREHLGSVVPVRDN+FAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAEDD
Sbjct: 38 VRLISAKKNEPEWLLEWRLKAYEAWREMPEPDWAKLDIAPIDYEAISYWAAPKKKPVLDSMDDVDPEIRDMFDKLGIPLHEQKLLSNVAVDAIVDSVSVTTTFKKTLAEAGVIFCSFSEAVHDHPELVREHLGSVVPVRDNFFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAEDD 230
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A3C2B533_9ACTN (Fe-S cluster assembly protein SufB n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B533_9ACTN) HSP 1 Score: 352 bits (904), Expect = 3.340e-118 Identity = 170/195 (87.18%), Postives = 186/195 (95.38%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAEDD 585
D VRLIS+KK+EPEWLL+WRLKA+ AW+ M+EPDWA LDIAPIDYQA+SYWAAPK K LDSMD+VDP+IR+MFDKLGIPLHEQKM+SNVA+DAIVDSVSVTTTFKATLAEAGVIFCS SEAV +HPELVRE+LGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLI+A+DD
Sbjct: 36 DVVRLISAKKNEPEWLLDWRLKAFAAWQAMDEPDWAMLDIAPIDYQAISYWAAPKPKKQLDSMDEVDPEIRDMFDKLGIPLHEQKMLSNVALDAIVDSVSVTTTFKATLAEAGVIFCSMSEAVHEHPELVREYLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIIADDD 230
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A6N2CU91_9BACT (Fe-S cluster assembly protein SufB n=3 Tax=Saprospirales bacterium TaxID=2026790 RepID=A0A6N2CU91_9BACT) HSP 1 Score: 307 bits (786), Expect = 2.350e-100 Identity = 145/195 (74.36%), Postives = 175/195 (89.74%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAEDD 585
D VRLISSKK+EPEWLL WRL+A+ WK M+EPDWAKL+IAPIDYQ + Y+AAPK++ L+S+D+ DP++ F++LGIPL+E+K+++ VA+DA++DSVSVTTTFK LAE G+IFCSFSEAVQ+HP+LVR++LGSVVP DNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRIN+ NTGQFERTLIVAEDD
Sbjct: 36 DVVRLISSKKNEPEWLLAWRLEAFAKWKQMKEPDWAKLNIAPIDYQDIIYYAAPKKQKKLNSLDEADPELLRTFERLGIPLNERKVLAGVAVDAVIDSVSVTTTFKTKLAELGIIFCSFSEAVQEHPDLVRKYLGSVVPQNDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINAANTGQFERTLIVAEDD 230
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A539EPJ2_9BACT (Fe-S cluster assembly protein SufB n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A539EPJ2_9BACT) HSP 1 Score: 303 bits (775), Expect = 1.010e-98 Identity = 146/194 (75.26%), Postives = 170/194 (87.63%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAED 582
DTVRLIS+KK+EPEWLLEWRLKAY W TM+EP W ++ IDYQ + Y++APK K VL SMD+VDP++R FDKLGIPL EQK++S VA+DA+ DSVSV TTFK TL+EAGVIFCSFSEAV +HPELV+++LGSVVP DNY+AALNSAVFSDGSFC+IPKGVRCPMELSTYFRIN++NTGQFERTLIVAED
Sbjct: 34 DTVRLISTKKNEPEWLLEWRLKAYRHWLTMKEPVWQNVNFPKIDYQDIIYYSAPKPKKVLASMDEVDPEVRATFDKLGIPLEEQKILSGVAVDAVFDSVSVVTTFKKTLSEAGVIFCSFSEAVHEHPELVKKYLGSVVPAADNYYAALNSAVFSDGSFCFIPKGVRCPMELSTYFRINAKNTGQFERTLIVAED 227
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A4Q1JKF9_9BACT (Fe-S cluster assembly protein SufB n=14 Tax=Bacteroidia TaxID=200643 RepID=A0A4Q1JKF9_9BACT) HSP 1 Score: 301 bits (772), Expect = 3.220e-98 Identity = 145/195 (74.36%), Postives = 172/195 (88.21%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAEDD 585
D +RLISSKK+EPE++LE+RLKAY W TM+ P+WA L+I PIDYQ + Y+AAPKQK L+SMDDVDP+IR FDKLGIPL EQK++SNVA+D ++DS SV TTFK LAE G+IFCSFSEAVQDHP+L++E++G+VVP RDN+FAALNSAVFSDGSF YIPKGVRCPMELSTYFRIN++NTGQFERTLIV EDD
Sbjct: 38 DVIRLISSKKNEPEFMLEFRLKAYRHWLTMKMPEWAHLEIPPIDYQDIIYYAAPKQKAKLESMDDVDPEIRATFDKLGIPLDEQKILSNVAVDVVMDSSSVKTTFKEALAEKGIIFCSFSEAVQDHPDLIQEYMGTVVPYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAENTGQFERTLIVCEDD 232
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A2V8CES4_9BACT (Fe-S cluster assembly protein SufB n=3 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A2V8CES4_9BACT) HSP 1 Score: 300 bits (769), Expect = 8.610e-98 Identity = 143/194 (73.71%), Postives = 167/194 (86.08%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAED 582
D VRLIS+KK EPEWLLEWRLKAY W TM+EP WA + PIDYQ + Y+AAPK+KP L S+D++DP+IR F+KLGIPLHEQK++S VA+DA+ DSVSV TTFK LAE G+IFCSFSEAVQ HP+LVR++LGSVVP DN+FA LNSAVFSDGSF YIPKGVRCPMELSTYFRIN+++TGQFERTLIVAE+
Sbjct: 36 DIVRLISAKKGEPEWLLEWRLKAYRMWLTMKEPTWANVKYGPIDYQDIIYYAAPKKKPALQSLDEIDPEIRRTFEKLGIPLHEQKLLSGVAVDAVFDSVSVATTFKEKLAELGIIFCSFSEAVQSHPQLVRKYLGSVVPYSDNFFATLNSAVFSDGSFAYIPKGVRCPMELSTYFRINAKDTGQFERTLIVAEE 229
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A7Y1UCR1_9BACT (Fe-S cluster assembly protein SufB n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=A0A7Y1UCR1_9BACT) HSP 1 Score: 300 bits (769), Expect = 8.860e-98 Identity = 139/194 (71.65%), Postives = 171/194 (88.14%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAED 582
DTVRL+S+KK+EPEW+LEWRLKAY+ W T+ EP+W + +D+Q + Y+AAPKQKPVLDS+DDVDP++R+M+DKLGI + EQK +SNVA+D ++DSVSV TTF TLAE G+IFCSFSEA+Q+HPEL+++H+GSVVP DN++AALNSAVFSDGSFCYIPKGVRCPMELSTYFRIN NTGQFERTLIVAE+
Sbjct: 37 DTVRLLSAKKNEPEWMLEWRLKAYKHWLTLTEPNWPNVKYQKVDFQDIIYYAAPKQKPVLDSLDDVDPEMRKMYDKLGISVDEQKRLSNVAVDFVMDSVSVKTTFTKTLAEKGIIFCSFSEAIQEHPELIKKHIGSVVPYTDNFYAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINEANTGQFERTLIVAEE 230
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A1M6QL59_9BACT (Fe-S cluster assembly protein SufB n=3 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6QL59_9BACT) HSP 1 Score: 300 bits (767), Expect = 1.720e-97 Identity = 140/194 (72.16%), Postives = 169/194 (87.11%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAED 582
+ VR IS+KK+EPEW+LEWRL AYE WK MEEPDW+ + IDYQA+ Y++APKQK + S+D+VDP++ E F+KLGI L+EQK ++ VA+DA++DSVSV TTFK TL E G+IFCSFSEAV++HPELVR+HLGSVVPV DNYF+ALNSAVFSDGSFCYIPKGVRCPMELSTYFRIN+ NTGQFERTLIVA++
Sbjct: 36 EIVRFISAKKEEPEWMLEWRLSAYERWKNMEEPDWSNVKYPKIDYQAIKYYSAPKQKKAVGSLDEVDPELIETFEKLGISLNEQKRLTGVAVDAVIDSVSVATTFKETLGERGIIFCSFSEAVKEHPELVRKHLGSVVPVSDNYFSALNSAVFSDGSFCYIPKGVRCPMELSTYFRINAANTGQFERTLIVADE 229
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A349B6P3_9ACTN (Fe-S cluster assembly protein SufB (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B6P3_9ACTN) HSP 1 Score: 292 bits (748), Expect = 1.960e-97 Identity = 144/195 (73.85%), Postives = 165/195 (84.62%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQK-PVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAED 582
DTVR IS+KKDEPEWLLEWRL AY WKTME P W + PID+Q + YWAAPK K P S+D+VDP+IR FDKLGI L EQ+ +S VA+DAI+DSVSV TTFKATLAEAGVIFCSFSEAV++HPELVR +LGSVVP RDN++AALNSAVFSDGSFC++P GVRCPMELSTYFR+N+ TGQFERTLIVAE+
Sbjct: 33 DTVRFISAKKDEPEWLLEWRLAAYRHWKTMEPPVWQNVHHPPIDFQDMHYWAAPKPKGPAPASLDEVDPEIRATFDKLGISLAEQERLSGVAVDAIIDSVSVATTFKATLAEAGVIFCSFSEAVREHPELVRRYLGSVVPPRDNFYAALNSAVFSDGSFCFVPAGVRCPMELSTYFRMNAAETGQFERTLIVAEE 227
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Match: A0A520QKY5_9DELT (Fe-S cluster assembly protein SufB n=1 Tax=Sandaracinaceae bacterium TaxID=2510337 RepID=A0A520QKY5_9DELT) HSP 1 Score: 299 bits (765), Expect = 4.730e-97 Identity = 140/194 (72.16%), Postives = 170/194 (87.63%), Query Frame = 1
Query: 1 DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYWAAPKQKPVLDSMDDVDPDIREMFDKLGIPLHEQKMMSNVAIDAIVDSVSVTTTFKATLAEAGVIFCSFSEAVQDHPELVREHLGSVVPVRDNYFAALNSAVFSDGSFCYIPKGVRCPMELSTYFRINSQNTGQFERTLIVAED 582
DT+RLIS+KK+EPEWLL WRLKA+ WK M+EP WAK+D IDYQ++SY+AAPKQKP L+S+D+VDP + E + KLGIPLHEQKM++ VA+DA+ DSVSV TTFK LAEAGVIFCS SEAV+ HPELV++++GSVVP+ DN+FA LNSAVF+DGSF Y+PKGVRCPMELSTYFRIN+ NTGQFERTLI+AE+
Sbjct: 47 DTIRLISAKKEEPEWLLAWRLKAFAHWKRMKEPTWAKVDYPQIDYQSISYYAAPKQKPKLESLDEVDPKLLETYAKLGIPLHEQKMLAGVAVDAVFDSVSVATTFKGKLAEAGVIFCSISEAVKKHPELVKKYIGSVVPITDNFFATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINASNTGQFERTLIIAEE 240 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111769.2458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111769.2458.1 >prot_M-pyrifera_M_contig111769.2458.1 ID=prot_M-pyrifera_M_contig111769.2458.1|Name=mRNA_M-pyrifera_M_contig111769.2458.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp DTVRLISSKKDEPEWLLEWRLKAYEAWKTMEEPDWAKLDIAPIDYQALSYback to top mRNA from alignment at M-pyrifera_M_contig111769:3..587+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111769.2458.1 ID=mRNA_M-pyrifera_M_contig111769.2458.1|Name=mRNA_M-pyrifera_M_contig111769.2458.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig111769:3..587+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111769:3..587+ >mRNA_M-pyrifera_M_contig111769.2458.1 ID=mRNA_M-pyrifera_M_contig111769.2458.1|Name=mRNA_M-pyrifera_M_contig111769.2458.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig111769:3..587+ (Macrocystis pyrifera P11B4 male)back to top |