mRNA_M-pyrifera_M_contig111605.2408.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: A0A520XLI2_9ACTN (Fe-S cluster assembly ATPase SufC n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XLI2_9ACTN) HSP 1 Score: 294 bits (752), Expect = 1.280e-98 Identity = 146/171 (85.38%), Postives = 163/171 (95.32%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFLA 513
AAAG+F+GFQYPVEIPGVNNMYFLRTALNSVR+ARGD E+SARDFL++ANEAM LVEMK+ FL+R+VNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRV+A+GVNSLRGP+RSMIVITHYQRLLDYI+PDFVHVLVNG+IV+SGD +LA LE GYADF+A
Sbjct: 76 AAAGVFMGFQYPVEIPGVNNMYFLRTALNSVRRARGDYEISARDFLAVANEAMELVEMKEGFLNRSVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVVANGVNSLRGPERSMIVITHYQRLLDYIKPDFVHVLVNGRIVESGDHTLALHLEDHGYADFVA 246
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: A0A6C7EBV2_ILUCY (FeS assembly ATPase SufC n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EBV2_ILUCY) HSP 1 Score: 293 bits (751), Expect = 2.150e-98 Identity = 146/170 (85.88%), Postives = 160/170 (94.12%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFL 510
AAAG+FLGFQYPVEIPGVNNMYFLRTALNSVR++RGD E+SARDFL ANEAM LVEMK+DFL+RAVNAGFSGGEKKRNEILQMA+MQPRLAVLDETDSGLDIDALR+IASGVN LRGP+RSMIVITHYQRLLDYI+PDFVHVLV+G+IVQSGD +LA LE GYADF+
Sbjct: 75 AAAGVFLGFQYPVEIPGVNNMYFLRTALNSVRRSRGDGEISARDFLKFANEAMELVEMKEDFLNRAVNAGFSGGEKKRNEILQMALMQPRLAVLDETDSGLDIDALRIIASGVNELRGPERSMIVITHYQRLLDYIKPDFVHVLVDGRIVQSGDHTLALHLEEHGYADFV 244
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: UPI000348EF00 (Fe-S cluster assembly ATPase SufC n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000348EF00) HSP 1 Score: 291 bits (744), Expect = 2.490e-97 Identity = 143/170 (84.12%), Postives = 160/170 (94.12%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFL 510
AAAG+F+GFQYPVEIPGVNNMYFLRTALNSVRKARG+ E+ ARDFL ANEAMALV+MK+DFL+RAVNAGFSGGEKKRNEILQMAVMQPRLA+LDETDSGLDIDALR+IA GVN+LRGP+RSMIVITHYQRLLDYI+PDFVHVLV+G+IV+SGD +LA LE GYADF+
Sbjct: 75 AAAGIFMGFQYPVEIPGVNNMYFLRTALNSVRKARGETEIGARDFLKTANEAMALVDMKEDFLNRAVNAGFSGGEKKRNEILQMAVMQPRLAILDETDSGLDIDALRIIAGGVNALRGPERSMIVITHYQRLLDYIKPDFVHVLVDGRIVESGDHTLALHLEDHGYADFV 244
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: A0A6N2DRN1_9ACTN (Fe-S cluster assembly ATPase SufC n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DRN1_9ACTN) HSP 1 Score: 288 bits (737), Expect = 2.890e-96 Identity = 142/170 (83.53%), Postives = 159/170 (93.53%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFL 510
AAAG+F+GFQYPVEIPGVNNMYFLRTALNSVR++RGD E+SAR+FL +A +AM LVEMKQDFL RAVNAGFSGGEKKRNEILQMA+MQPRLAVLDETDSGLDIDALR+IA GVN+LRGP+RSMIVITHYQRLLDYI+PDFVHVLV+G+IV+SGD +LA LE GYADFL
Sbjct: 75 AAAGVFMGFQYPVEIPGVNNMYFLRTALNSVRRSRGDTEISAREFLKVAKDAMDLVEMKQDFLDRAVNAGFSGGEKKRNEILQMAIMQPRLAVLDETDSGLDIDALRIIAGGVNALRGPERSMIVITHYQRLLDYIKPDFVHVLVDGRIVESGDHTLALHLEDHGYADFL 244
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: UPI001E2990FE (Fe-S cluster assembly ATPase SufC n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2990FE) HSP 1 Score: 283 bits (725), Expect = 1.750e-94 Identity = 139/170 (81.76%), Postives = 156/170 (91.76%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFL 510
AAAG+F+GFQYPVEIPGVNNMYFLRTA+NSVR+ RGDDE+ ARDFL +A EAMALVEM DFL+R+VNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRV+A GVN++R P+RSMIVITHYQRLL+YI PDFVHVLV+GKIV+SGD +LA LE GYADF+
Sbjct: 75 AAAGVFMGFQYPVEIPGVNNMYFLRTAVNSVRRTRGDDEIGARDFLEVAEEAMALVEMHSDFLYRSVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVVAGGVNAMRDPERSMIVITHYQRLLEYIRPDFVHVLVDGKIVESGDHTLALHLERHGYADFV 244
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: UPI00029B4320 (Fe-S cluster assembly ATPase SufC n=1 Tax=Rickettsiella massiliensis TaxID=676517 RepID=UPI00029B4320) HSP 1 Score: 247 bits (630), Expect = 3.810e-80 Identity = 116/170 (68.24%), Postives = 144/170 (84.71%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFL 510
A AGLFLGFQYPVEIPGV+N+Y L+TA N++RKARG+ E+ A DFL + E +A V+M QDFL+R+VN GFSGGEKKRNEILQMA+++P+LA+LDETDSGLDIDAL+++A G+N LR DR++I+ITHYQRLLDYI+PD VH+L GKI++SGD SL K LE GYA FL
Sbjct: 76 AQAGLFLGFQYPVEIPGVSNVYLLKTACNAIRKARGEPELDAMDFLRLVKEKLAYVDMDQDFLYRSVNEGFSGGEKKRNEILQMALLEPKLAILDETDSGLDIDALKIVAEGINRLRSKDRAIILITHYQRLLDYIQPDVVHILAEGKIIRSGDFSLVKSLEKEGYAHFL 245
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: A0A385Z5J8_9PSED (Fe-S cluster assembly ATPase SufC n=3 Tax=Pseudomonas TaxID=286 RepID=A0A385Z5J8_9PSED) HSP 1 Score: 247 bits (630), Expect = 4.070e-80 Identity = 121/172 (70.35%), Postives = 144/172 (83.72%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFLAG 516
A AG+FL FQYPVEIPGV N+YFLRTALN+VR+ RG +E+ A DFL++A E MALVEM Q F+ RAVN GFSGGEKKRNEI QM +++P+LA+LDETDSGLDIDALR +A+GVN+LR DR+++VITHYQRLLDYI PD VHV+ NG+IVQSGD +LA ELE GYA F G
Sbjct: 75 AVAGIFLAFQYPVEIPGVGNLYFLRTALNAVRRQRGLEELDALDFLTLAKERMALVEMDQSFMSRAVNEGFSGGEKKRNEIFQMMILEPKLAILDETDSGLDIDALRTVAAGVNALRREDRALLVITHYQRLLDYIVPDHVHVMANGQIVQSGDKTLAVELEKHGYAGFEQG 246
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: A8PN06_9COXI (FeS assembly ATPase SufC n=2 Tax=Rickettsiella grylli TaxID=59196 RepID=A8PN06_9COXI) HSP 1 Score: 246 bits (627), Expect = 1.130e-79 Identity = 116/170 (68.24%), Postives = 146/170 (85.88%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFL 510
A AGLFL FQYP+EIPGV+N+Y L+ ALN++RKARG+ E+ A DFL E + +VEM DFL+RAVNAGFSGGEKKRNEILQMA+++P+LA+LDETDSGLDIDAL+++A GVN+LR P+R+M++ITHYQRLLDYI+PD+VH+L GKI++SGD SLA+ LE GYA FL
Sbjct: 76 AHAGLFLAFQYPIEIPGVSNIYLLKAALNAIRKARGETELDAMDFLKRVKEKLNVVEMDHDFLYRAVNAGFSGGEKKRNEILQMALLEPQLALLDETDSGLDIDALKIVAKGVNTLRSPERAMMLITHYQRLLDYIKPDYVHILAGGKIIRSGDFSLAQTLEKEGYATFL 245
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: A0A1I5QQ32_9PSED (Iron-regulated ABC transporter ATPase subunit SufC n=2 Tax=Pseudomonadales TaxID=72274 RepID=A0A1I5QQ32_9PSED) HSP 1 Score: 245 bits (625), Expect = 2.340e-79 Identity = 117/169 (69.23%), Postives = 143/169 (84.62%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADF 507
A AG+FL FQYPVEIPGV N+YFLRTALN+VR+ RG +E+ A DFL++A E M LVEM + ++RA+N GFSGGEKKRNEI QMAV+QP LA+LDETDSGLDIDALR +A+GVN+LR DR++++ITHYQRLLDYI PD++HV+ NG+IVQSGD +LA ELE GYA F
Sbjct: 75 AVAGIFLAFQYPVEIPGVGNLYFLRTALNAVRRQRGQEELDAMDFLALAKERMQLVEMDPELMNRALNEGFSGGEKKRNEIFQMAVLQPSLAILDETDSGLDIDALRSVAAGVNALRSADRALLLITHYQRLLDYIVPDYIHVMANGRIVQSGDKALAVELEQHGYAHF 243
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Match: A0A2Z5UTY5_9COXI (FeS assembly ATPase SufC n=2 Tax=Rickettsiella TaxID=59195 RepID=A0A2Z5UTY5_9COXI) HSP 1 Score: 244 bits (624), Expect = 3.110e-79 Identity = 114/170 (67.06%), Postives = 147/170 (86.47%), Query Frame = 1
Query: 1 AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANEAMALVEMKQDFLHRAVNAGFSGGEKKRNEILQMAVMQPRLAVLDETDSGLDIDALRVIASGVNSLRGPDRSMIVITHYQRLLDYIEPDFVHVLVNGKIVQSGDSSLAKELEVSGYADFL 510
A AGLFL FQYPVEIPGV+N+Y L+ +LN++RKARG+ E+ A DFL++ E + LVEM QDFL+R+VN GFSGGEKKRNEILQMA+++P+LAVLDETDSGLDIDAL+++++GVN LR P+R+MI+ITHYQRLLDYI+PD+VH+L GKI++SGD +LA+ LE GY+ L
Sbjct: 76 AQAGLFLAFQYPVEIPGVSNVYLLKASLNAIRKARGETELDAMDFLALVKEKLKLVEMDQDFLYRSVNEGFSGGEKKRNEILQMALLEPKLAVLDETDSGLDIDALKIVSNGVNRLRSPERAMILITHYQRLLDYIKPDYVHILAGGKIIRSGDFTLAQTLEKDGYSTIL 245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111605.2408.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111605.2408.1 >prot_M-pyrifera_M_contig111605.2408.1 ID=prot_M-pyrifera_M_contig111605.2408.1|Name=mRNA_M-pyrifera_M_contig111605.2408.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp AAAGLFLGFQYPVEIPGVNNMYFLRTALNSVRKARGDDEVSARDFLSIANback to top mRNA from alignment at M-pyrifera_M_contig111605:61..588- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111605.2408.1 ID=mRNA_M-pyrifera_M_contig111605.2408.1|Name=mRNA_M-pyrifera_M_contig111605.2408.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig111605:61..588- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111605:61..588- >mRNA_M-pyrifera_M_contig111605.2408.1 ID=mRNA_M-pyrifera_M_contig111605.2408.1|Name=mRNA_M-pyrifera_M_contig111605.2408.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig111605:61..588- (Macrocystis pyrifera P11B4 male)back to top |