mRNA_M-pyrifera_M_contig110681.2247.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A7X5WT35_9ACTN (Beta-ketoacyl-ACP synthase II n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WT35_9ACTN) HSP 1 Score: 332 bits (851), Expect = 2.360e-111 Identity = 168/198 (84.85%), Postives = 182/198 (91.92%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
AVAGF NMTALS SGVSRPFDADRDGFV+AEG A+LVLEEW+RA ARGATIL EILGSASTADAHHITAPAPGGTGA+SCMQLAM+DAGITA DVVHINAHGT+TD NDAAEAAA+AK+FG PGPA+TSTKGVTGHALG AGALEA A++ AM +G+IPPT GHE D D+PEIDLVVGDPRPWTPGPSLSNSFGFGG
Sbjct: 183 AVAGFANMTALSGSGVSRPFDADRDGFVMAEGCAVLVLEEWERAEARGATILAEILGSASTADAHHITAPAPGGTGAVSCMQLAMDDAGITAADVVHINAHGTATDMNDAAEAAAIAKLFGRPGPAVTSTKGVTGHALGGAGALEAAAVVLAMQRGLIPPTAGHETPDPDVPEIDLVVGDPRPWTPGPSLSNSFGFGG 380
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A6B1AWU8_9ACTN (Beta-ketoacyl-ACP synthase II n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWU8_9ACTN) HSP 1 Score: 314 bits (804), Expect = 3.150e-104 Identity = 162/198 (81.82%), Postives = 179/198 (90.40%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
AVAGF NMTALS+SGVSRPFD RDGFV+AEGAA+LVLEE A ARGATILGEILGSASTADAHHITAPAPGGTGAI+CM+LA+EDAGITA +VVHINAHGTSTDKNDAAEAAA+AK+FGTPGP ITSTKGVTGHALG AGALEA A+L +M+ +IPPT GHE +D +MP+IDLVVG+PR W PGPSLSNSFGFGG
Sbjct: 183 AVAGFSNMTALSSSGVSRPFDPRRDGFVMAEGAAVLVLEELSHAEARGATILGEILGSASTADAHHITAPAPGGTGAITCMRLAIEDAGITAEEVVHINAHGTSTDKNDAAEAAAIAKIFGTPGPVITSTKGVTGHALGGAGALEAAAVLLSMSHRLIPPTAGHETLDPEMPDIDLVVGEPRRWVPGPSLSNSFGFGG 380
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A3M2H4K5_ACTSX (Beta-ketoacyl-ACP synthase II n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H4K5_ACTSX) HSP 1 Score: 300 bits (767), Expect = 1.310e-98 Identity = 149/198 (75.25%), Postives = 174/198 (87.88%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
A+AGF NMTALS+SG+SRPFDA+RDGFV+ EGAA+LVLEE +RA ARGAT+L EI GSASTADAHHITAPAPGG+GA+ CM+LA+ DAG+ A D+VH+NAHGTSTD NDAAEA A+AKVFG PGP +TSTKGVTGHALGAAGALEA A++ +M KGVIPPT G +D +PE+DLVVG+PR WTPGPS+SNSFGFGG
Sbjct: 183 AIAGFSNMTALSSSGISRPFDAERDGFVMGEGAAVLVLEERERALARGATVLAEIAGSASTADAHHITAPAPGGSGAVHCMELALADAGLAAADIVHVNAHGTSTDLNDAAEAEALAKVFGAPGPIVTSTKGVTGHALGAAGALEAAAVVLSMVKGVIPPTAGTRAVDPTLPELDLVVGEPRAWTPGPSISNSFGFGG 380
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A3C0HQD3_9ACTN (Beta-ketoacyl synthase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HQD3_9ACTN) HSP 1 Score: 290 bits (742), Expect = 8.210e-95 Identity = 153/200 (76.50%), Postives = 170/200 (85.00%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTP--GPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
AVAGFGNMTALSNSG SRPFD++RDGFV+AEGAAILVLE W+ A ARGATILGE+LGSASTADAHHITAP+PGG GA++CMQLAM+DAGIT V HINAHGTSTDKNDAAEA AVAKVFGT GP +TSTKG+TGHALGAAGALEAVA+L AM G +PPT G D ++P I++V G P W PGPSLSNSFGFGG
Sbjct: 183 AVAGFGNMTALSNSGDSRPFDSNRDGFVMAEGAAILVLEAWELAEARGATILGEVLGSASTADAHHITAPSPGGVGAVTCMQLAMDDAGITPDQVRHINAHGTSTDKNDAAEAEAVAKVFGTDDSGPLVTSTKGITGHALGAAGALEAVAVLLAMQHGKVPPTAGLTERDPELPAINIVEGGPADWEPGPSLSNSFGFGG 382
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: UPI001AA0546C (beta-ketoacyl-[acyl-carrier-protein] synthase family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA0546C) HSP 1 Score: 290 bits (742), Expect = 1.080e-94 Identity = 144/197 (73.10%), Postives = 171/197 (86.80%), Query Frame = 1
Query: 4 VAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
+AGF NMTALS+SGVSRPFD DRDGFV+AEG A+LVLEEW+ A RGATIL E+LGSASTADAHHITAP+P G+GAI+CMQLA+EDAG+ DV H+NAHGTST NDAAEA A+AK+FGTPGP ITS KGVTGH+LGAAGALEAV+++ +M KG++PPT G+E D ++P ID+V G+PRPW PGP+LSNSFGFGG
Sbjct: 190 IAGFTNMTALSSSGVSRPFDRDRDGFVMAEGGAVLVLEEWESAQRRGATILAEVLGSASTADAHHITAPSPDGSGAIACMQLALEDAGVDPSDVRHVNAHGTSTPLNDAAEAEAIAKLFGTPGPPITSIKGVTGHSLGAAGALEAVSVVLSMVKGLLPPTAGYEHPDPELPPIDVVHGEPRPWQPGPTLSNSFGFGG 386
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A7Y2GRH0_9ACTN (Beta-ketoacyl-ACP synthase II n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GRH0_9ACTN) HSP 1 Score: 288 bits (738), Expect = 3.020e-94 Identity = 145/198 (73.23%), Postives = 171/198 (86.36%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
A+AGFGNMTALS G+S PFDA RDGF++ EGAA+LVLEEWDRA RGATI+GE+LG+ASTADAHHITAPAPGG+GA+ M+LAMEDAG+ GD+VHINAHGTST NDAAEA A+AKVFG PGP +TSTKG+TGHALGAAGALEA A++ A+ +IP T G+E+ D ++P IDLVVG+PR WTPGPS+SNSFGFGG
Sbjct: 181 ALAGFGNMTALSTRGISVPFDARRDGFMMGEGAAVLVLEEWDRAVQRGATIIGEMLGAASTADAHHITAPAPGGSGAVRSMELAMEDAGLGPGDIVHINAHGTSTPLNDAAEAHAMAKVFGEPGPIVTSTKGITGHALGAAGALEAAAVVLAIEHELIPQTAGYEQPDPELPSIDLVVGEPRSWTPGPSMSNSFGFGG 378
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A7K1YTJ4_9ACTN (Beta-ketoacyl-ACP synthase II n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YTJ4_9ACTN) HSP 1 Score: 287 bits (735), Expect = 1.030e-93 Identity = 146/199 (73.37%), Postives = 171/199 (85.93%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGT-PGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
AVAGF NMTALS+SGVSRPFDA RDGFV+AEGAA+LVLE+WD A ARGA IL E+LGSASTADAHHITAP+PGG+GA+ CMQLA++DAG+ DVVH+NAHGTSTD NDAAEA A++KVFGT PGP +TSTKGVTGHALGAAGALEA+A++ M KG+IPPT G +D ++P I +V G+P PW PG S+SNSFGFGG
Sbjct: 186 AVAGFTNMTALSSSGVSRPFDAQRDGFVMAEGAAVLVLEDWDMAQARGAPILAEVLGSASTADAHHITAPSPGGSGAVHCMQLALDDAGVRPADVVHVNAHGTSTDLNDAAEAEALSKVFGTSPGPLVTSTKGVTGHALGAAGALEALAVVLGMQKGLIPPTAGLTELDPELPPIQVVTGEPAPWEPGVSISNSFGFGG 384
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A432JN69_9ACTN (Beta-ketoacyl synthase n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A432JN69_9ACTN) HSP 1 Score: 286 bits (733), Expect = 1.780e-93 Identity = 143/198 (72.22%), Postives = 169/198 (85.35%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
A+AGF NMTALS++G+SRPFDADRDGFV+ EGA IL+LEEWD A RGAT+L E+LG ASTADAHHITAP+PGG GAI+CM+LAME+AGI DV HINAHGTST ND AEA AV K+FG GP +TSTKG+TGHALGAAGALEAVA+++AM + ++PPT GH D +MP+I+LVVG+P PWTPGP+LSNSFGFGG
Sbjct: 183 AMAGFTNMTALSSAGISRPFDADRDGFVMGEGAGILLLEEWDIALERGATVLAEVLGGASTADAHHITAPSPGGVGAITCMELAMEEAGIKPADVTHINAHGTSTPLNDMAEAVAVNKLFGAAGPLLTSTKGITGHALGAAGALEAVAVVSAMQRRLVPPTAGHTTDDPEMPQINLVVGEPAPWTPGPALSNSFGFGG 380
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A520Y0C7_9ACTN (Beta-ketoacyl-ACP synthase II n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y0C7_9ACTN) HSP 1 Score: 285 bits (730), Expect = 5.210e-93 Identity = 148/199 (74.37%), Postives = 169/199 (84.92%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFG-TPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
A+AGF NMTALSN SRPFD +RDGFV+AEGAA+L+LEEW+RA ARGATIL E+LG+ASTADAHHITAP+PGG GA++C++LA+EDAG++ D+ HINAHGTST NDAAEA A+ KVFG T PA+TSTKGVTGHALGAAGALEA AI+ AM G IPPTVGH D MPEIDLVVG+ R WTPGPSLSNSFGFGG
Sbjct: 183 ALAGFRNMTALSNENFSRPFDLNRDGFVMAEGAAVLILEEWERAEARGATILAEVLGAASTADAHHITAPSPGGVGAVNCIELALEDAGLSPADITHINAHGTSTPLNDAAEAEAINKVFGGTDRPAVTSTKGVTGHALGAAGALEAAAIVLAMQHGKIPPTVGHTTPDPAMPEIDLVVGEARDWTPGPSLSNSFGFGG 381
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Match: A0A7Y2N895_9ACTN (Beta-ketoacyl-ACP synthase II n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N895_9ACTN) HSP 1 Score: 284 bits (727), Expect = 1.440e-92 Identity = 142/198 (71.72%), Postives = 172/198 (86.87%), Query Frame = 1
Query: 1 AVAGFGNMTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGSASTADAHHITAPAPGGTGAISCMQLAMEDAGITAGDVVHINAHGTSTDKNDAAEAAAVAKVFGTPGPAITSTKGVTGHALGAAGALEAVAILAAMAKGVIPPTVGHERMDADMPEIDLVVGDPRPWTPGPSLSNSFGFGG 594
++AGFGNMTALS++G+S PFDA RDGF++ EGA ++VLEEW+ A RGATI+GE+LG+ASTADAHHITAPAPGG+GA+ M+LAME AG+ A D+VHINAHGTST ND+AEA A+AKVFG PGP +TSTKG+TGHALGAAGALEAVA+L AM +IPPT G E +D ++P I+LVVG+PRPWTPGPS+SNSFGFGG
Sbjct: 182 SLAGFGNMTALSSAGISVPFDARRDGFMMGEGAGVIVLEEWNHALDRGATIIGEMLGAASTADAHHITAPAPGGSGAVRSMELAMEHAGLRASDIVHINAHGTSTPLNDSAEAHAMAKVFGEPGPLVTSTKGITGHALGAAGALEAVAVLLAMEHKLIPPTAGFEIVDPELPAINLVVGEPRPWTPGPSMSNSFGFGG 379 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110681.2247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110681.2247.1 >prot_M-pyrifera_M_contig110681.2247.1 ID=prot_M-pyrifera_M_contig110681.2247.1|Name=mRNA_M-pyrifera_M_contig110681.2247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp MTALSNSGVSRPFDADRDGFVIAEGAAILVLEEWDRAAARGATILGEILGback to top mRNA from alignment at M-pyrifera_M_contig110681:3..596+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110681.2247.1 ID=mRNA_M-pyrifera_M_contig110681.2247.1|Name=mRNA_M-pyrifera_M_contig110681.2247.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig110681:3..596+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110681:3..596+ >mRNA_M-pyrifera_M_contig110681.2247.1 ID=mRNA_M-pyrifera_M_contig110681.2247.1|Name=mRNA_M-pyrifera_M_contig110681.2247.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig110681:3..596+ (Macrocystis pyrifera P11B4 male)back to top |