mRNA_M-pyrifera_M_contig10989.2065.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.340e-73 Identity = 191/298 (64.09%), Postives = 204/298 (68.46%), Query Frame = 1
Query: 1 QYDWVRFSDEEEEE-ASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSSTEAKSHPLT-GNASCIPHPNSLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXX------GEETAPVVRSAA-KLTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILTAEFYRHEYATLACTHLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQV--GDRSETKQEASRGRRRSGKNERSPSVIDVTE 861
+YDWVRFSDEEE+E A LCNM M+CGP GVGKTS +YGCA+ LGYEVIEVN SQLRSGAAIRRLFGEA QSHHVSS E S P T G A P + XXXXXXXXXXXX +GG XXXXXXX XX G E VV A KLTLILFEEVDVVFEEDVGFLGALRDLRR AKCPVILTAE YR EYA L+C HLPRPRL ELE CL +VA AE L+VS AL ALAQYHMGDLRACL LQ G R + Q+A SVID+TE
Sbjct: 857 EYDWVRFSDEEEDEDARLCNMAMLCGPPGVGKTSAVYGCAKALGYEVIEVNPSQLRSGAAIRRLFGEATQSHHVSSAETSSKPGTDGVAGGRKSPPLDGMFPSDRAAAGWRGRXXXXXXXXXXXXGGRGGXXXXXXXXVEXXXGVAGEGTEVMRVVTPAGNKLTLILFEEVDVVFEEDVGFLGALRDLRRAAKCPVILTAETYRREYAPLSCNIWHLPRPRLAELEACLTAVAAAERLDVSLGALRALAQYHMGDLRACLFTLQACKGRRRQANQQAMLSAXXXXXXGGDCSVIDITE 1154
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A6H5KG45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG45_9PHAE) HSP 1 Score: 161 bits (407), Expect = 3.490e-37 Identity = 94/150 (62.67%), Postives = 105/150 (70.00%), Query Frame = 1
Query: 421 GEETAPVVRSAA-KLTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILTAEFYRHEYATLACTHLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQV--GDRSETKQEASRGRRRSGKNERSPSVIDVTE 861
G E VV A KLTLILFEEVDVVFEEDVGFLGALRDLRR AKCPVILTAE YR EYA L+C HLPRPRL ELE CL +VA AE L+VS AL ALAQYHMGDLRACL LQ G R + ++++ + S +D+TE
Sbjct: 93 GAEVMRVVAPAGNKLTLILFEEVDVVFEEDVGFLGALRDLRRAAKCPVILTAETYRREYAPLSCNIWHLPRPRLAELEACLTAVAAAERLDVSLGALRALAQYHMGDLRACLFTLQACKGRRRQANKQSTWSSAXXXXXGGACSAVDITE 242
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A7S2MJ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ85_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.860e-20 Identity = 81/221 (36.65%), Postives = 103/221 (46.61%), Query Frame = 1
Query: 25 DEEEEEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSSTEAKSHPLTGNASCIPHPNSLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAPVVRSAAKLTLILFEEVDVVF-EEDVGFLGALRDLRRGAKCPVILTAEFYRHE-YATLACTHLHLPRPRLLELEVCLQSVAEAE 681
D ++E +V GPTGVGK++ IY AE G++VIEVN+SQ+RSG AI+ LF EA QS HV + P + P S+ GR +E PV KL+LILFEE D VF EED GF ALR L R AKCPVILTA H ++ + C + L P E+ L +A A+
Sbjct: 138 DSDDERDQTDTTLLVYGPTGVGKSAMIYALAELNGFDVIEVNSSQVRSGGAIKDLFLEATQSRHVKDSFGSKQP-----AATPRNQSV-------------------------------GRGKKLKDRGGPTRDEACPVKN---KLSLILFEEADQVFPEEDPGFFPALRALSRSAKCPVILTANRVPHRIFSKIKCKIVGLAPPPPKEIAYRLSLIAAAQ 319
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A4D9CZ35_9STRA (Bromo domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ35_9STRA) HSP 1 Score: 106 bits (264), Expect = 9.270e-20 Identity = 86/252 (34.13%), Postives = 121/252 (48.02%), Query Frame = 1
Query: 25 DEEE-EEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSSTEAKSHPLTGNASCIPHPNSLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAPVVRSAAKLTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILTAEFYRHEYATLAC--THLHLPRPRLLELEVCLQSVAEAEGLE-VSAAALLALAQYHMGDLRACLLALQV 768
DE+E + T+VCGP+G+GK++ +Y A LG+EVIEVN SQLRSG I++LF EA QS H+ +A S + KG + ++ P RSA ++TLIL EEVD+VFEEDVGF ALR+ AK P++LTA + + C T LP P + L + L + EGL + ALA GD+R+ +++LQ+
Sbjct: 619 DEDEWNDGEPRTTTLVCGPSGIGKSAVVYATAARLGFEVIEVNTSQLRSGVEIKKLFSEATQSQHI--RQASS-----------------VCTFDQTTPAEQLWLTKSSKGANGLQKRKGAKQKDEDEVVWL--DKPIPRSRSANRMTLILIEEVDLVFEEDVGFHRALREFMSSAKWPLVLTANHPPDWLSEMECCRTRTVLPCPTVT-LALMLSMIWATEGLPGLPREHFCALACSSRGDVRSAIMSLQM 848
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A7L0X7W0_TYRSA (ATAD5 protein (Fragment) n=1 Tax=Tyrannus savana TaxID=137541 RepID=A0A7L0X7W0_TYRSA) HSP 1 Score: 103 bits (258), Expect = 4.440e-19 Identity = 84/278 (30.22%), Postives = 114/278 (41.01%), Query Frame = 1
Query: 34 EEEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSSTEAKSHPLTGNASCIPHPNSLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAPV-------------------VRSAAK---------LTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILTAEFYRHEYATLAC-THLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQVGDRS 780
EEEASLCN ++ GP GVGKT+ +Y CA+ LG+++ EVNAS RSG I EA QSH V +H SC P + + K +E P ++S +K +LILFEEVD++F+ED GFL A++ AK PV+LT C ++ P L+ LQ++ AE L L AL + D+R C+L LQ RS
Sbjct: 520 EEEASLCNTVLITGPPGVGKTAAVYACAQELGFKIFEVNASCQRSGRQILSQLREATQSHQVDKKGVNAHKPCFFNSCSPAKSPKKMYSPKKVILPRKPPLSPKGAGLKRNLTPKTLANYFKISSKRKGSDEEVPAEGKNRGNTQNSLEEKKDAQIKSVSKEEEHNRKSATSLILFEEVDIIFDEDAGFLSAIKTFMATAKRPVVLTTNDPTFSLMFDGCFEEINFRTPSLVNATSYLQTLCLAENLRTEGRDLAALVTTNNCDIRKCVLYLQFWARS 797
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A6A4SKC6_SCOMX (AAA domain-containing protein n=6 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4SKC6_SCOMX) HSP 1 Score: 103 bits (258), Expect = 5.000e-19 Identity = 86/284 (30.28%), Postives = 127/284 (44.72%), Query Frame = 1
Query: 25 DEEEEEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSS--------TEAKSHPLTGNASCIPHPNS--LFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAPVVRSAAKLTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILTAEFYRHEYATLA---CTHLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQVGDRSETKQEASRGRRRSGKNERS 837
D ++ E LCN ++ GPTGVGKT+ +Y CA+ LG++V EVNAS RSG I EA QSH V S T S+ +G+A I +S ++ + +E + +LILFEEVDV+F+ED GFL A++ K PVILT ++T+ +H P ++ + LQ + AEG+ + + +L + + D+R LL LQ RS + +R + KNE S
Sbjct: 994 DSKDAEDMLCNTMLITGPTGVGKTAAVYACAQELGFKVFEVNASSQRSGRLILSQLREATQSHQVDSQGVNAYKPTYFNSYGTSGSAGTIRPGSSPSMYTADINSTVSIKLLAPASKKVTKAKNEVANKHKDLAVKSPTAATAKENSDEQSKKTATSLILFEEVDVIFDEDSGFLAAIKTFMMTTKRPVILTTS--DPAFSTMFDGNFEEIHFKTPSMINVGSYLQLLCLAEGVRTDLSNISSLLRLNGCDVRQSLLQLQFWTRSAGGRRTTRSLTHTDKNEMS 1275
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A7K5TSN9_CEPOR (ATAD5 protein (Fragment) n=1 Tax=Cephalopterus ornatus TaxID=114276 RepID=A0A7K5TSN9_CEPOR) HSP 1 Score: 102 bits (255), Expect = 1.020e-18 Identity = 93/280 (33.21%), Postives = 122/280 (43.57%), Query Frame = 1
Query: 34 EEEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSSTEAKSHP--LTGNASCIPHPNSLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAPV-----------------VRSAAK-----------LTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILTAEFYRHEYATLAC-THLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQVGDRS 780
EEE SLCN ++ GP GVGKT+ +Y CA+ LG+++ EVNAS RSG I EA QSH V +H + S P ++ XXXXXXXX GE TA V ++S +K +LILFEEVD++F+ED GFL A++ AK PVILT C ++ P L+ LQ++ AE L L AL + D+R C+L LQ RS
Sbjct: 528 EEETSLCNTVLITGPPGVGKTAAVYACAQELGFKIFEVNASCQRSGRQILSQLREATQSHQVDKKGVNAHKPCFFNSCSTAKSPKKMYSXXXXXXXXKPPLSPKGAGLKRNLTPKTLANYFKISSKRKGNDGEVTAEVKTRGNTENSLEEKKDAQIKSISKEEGGEHNRKSATSLILFEEVDIIFDEDAGFLSAIKTFMATAKRPVILTTNDPTFSLMFDGCFEEINFRTPSLVNATSYLQTLCLAENLRTEGKDLAALVTTNNCDIRKCVLYLQFWVRS 807
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A8J1UL85_OWEFU (Ofus.G161281 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UL85_OWEFU) HSP 1 Score: 102 bits (253), Expect = 2.060e-18 Identity = 89/275 (32.36%), Postives = 118/275 (42.91%), Query Frame = 1
Query: 28 EEEEEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVS-----------STEAKSH----------PLTGNASC-------IPHPNSLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAPVVRSAAKLTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILT-AEFYRHEYATLACTHLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQ 765
EEEE+ LCN T++CGP G+GKTS +Y A+ LGY+V EVNAS R+G + EA QSH VS ST KS+ P G S IP N+ GG G + V +LILFEEVDVV EED GFL A++ G K P+I+T ++ Y L +P + LQ+++ AE V AL +L + + GD+R +LA Q
Sbjct: 1096 EEEEDDGLCNTTVICGPHGIGKTSVVYALAQDLGYKVFEVNASSCRNGKRVMSQLQEATQSHQVSKNHLEKSFSFNSTSGKSNSQDTSTKAAPPAAGTQSVANFFTKKIPSINTEKAPPKKRGRKPKEESPVKQKKEKSHKKSSVGGGLTNKQGPTSLKGLNLSSV-------SLILFEEVDVVLEEDKGFLAAVQQFIVGTKRPIIMTTSDPYFSSKLDRRFEELKFRQPSFNLVASYLQTLSLAENFLVDNDALCSLVELNRGDIRKSILATQ 1363
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A6P7THH5_OCTVU (ATPase family AAA domain-containing protein 5 isoform X1 n=3 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7THH5_OCTVU) HSP 1 Score: 102 bits (253), Expect = 2.060e-18 Identity = 91/294 (30.95%), Postives = 126/294 (42.86%), Query Frame = 1
Query: 22 SDEEEEEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSSTEAKSHPLTGNASCIPH--------PN-SLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAP--VVRSA--------------------------------AKLTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILT---AEFYRHEYATLACTHLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQ 765
S E E+ SLCN ++ GP G+GKT+++Y A LGY+V EVNAS +RSG I EA QSH VS ++ S L+ ++ +P+ P+ S F + T P V+R + A +LILF+EVD+VFEED GF A+ K P+ILT A+F E T +C LH P L LQ++ AE + A+ + L Y+ GD+R+CLLALQ
Sbjct: 1101 SPSESEDDSLCNTKLLTGPQGIGKTASVYALAMELGYQVFEVNASSVRSGKKILTRLQEATQSHQVSKDKSDSTILSQPSTDVPNAPLKNLDAPSFSTFFKMNVGNTASDKSSKSEKKLVGASLAGKLPNNKRKKNEKAVLPVKNTIPRCVIRKSSETGSWKKIDVVDTNVSNSLSSSDKVSNRLNIASTSLILFDEVDIVFEEDKGFWTAILQFMSSTKRPIILTSTSADF--SEQFTGSCEPLHFHTPSRKTLTSHLQTLCLAENVVTKASEISDLVTYYNGDVRSCLLALQ 1392
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Match: A0A6S7K5F2_PARCT (ATPase family AAA domain-containing 5 isoform X2 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K5F2_PARCT) HSP 1 Score: 101 bits (251), Expect = 2.920e-18 Identity = 84/249 (33.73%), Postives = 115/249 (46.18%), Query Frame = 1
Query: 19 FSDEEEEEASLCNMTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQSHHVSSTEAKSHPLTGNASCIPHPNSLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGRXXXXXXXXXXXGEETAPVVRSAAKLTLILFEEVDVVFEEDVGFLGALRDLRRGAKCPVILTAEFYRHEYATLACTHLHLPRPRLLELEVCLQSVAEAEGLEVSAAALLALAQYHMGDLRACLLALQ 765
F DEE ++CN ++ GP G GKTS +Y CAE LG++VIEVN+S R G I EA QSH VS+ L G +S +PH NS K GR EET ++LIL +EVDV+FEED GF ++ LR +K P+++TA H+ L P L LQ+V + + V+ + + AL+ H D+R LL+LQ
Sbjct: 324 FCDEE----NVCNTMLLSGPVGCGKTSAVYACAEELGFKVIEVNSSTKRGGKYILSELQEATQSHQVSTKRN----LQGQSSLLPHANS--------STNGPGEKKHGKEEIKKDKKLSKKGRPKKKEQL----SEETQ------GPMSLILLDEVDVLFEEDKGFWVSVNTLRLNSKRPIVMTASDPSAIEVDGEFEHVILKSPSLKLYAAYLQTVCLTKNVFVNPSDIHALSWLHYSDIRRLLLSLQ 546 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10989.2065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10989.2065.1 >prot_M-pyrifera_M_contig10989.2065.1 ID=prot_M-pyrifera_M_contig10989.2065.1|Name=mRNA_M-pyrifera_M_contig10989.2065.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=365bp MTMVCGPTGVGKTSTIYGCAEGLGYEVIEVNASQLRSGAAIRRLFGEAAQback to top mRNA from alignment at M-pyrifera_M_contig10989:1366..10065- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10989.2065.1 ID=mRNA_M-pyrifera_M_contig10989.2065.1|Name=mRNA_M-pyrifera_M_contig10989.2065.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8700bp|location=Sequence derived from alignment at M-pyrifera_M_contig10989:1366..10065- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10989:1366..10065- >mRNA_M-pyrifera_M_contig10989.2065.1 ID=mRNA_M-pyrifera_M_contig10989.2065.1|Name=mRNA_M-pyrifera_M_contig10989.2065.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2190bp|location=Sequence derived from alignment at M-pyrifera_M_contig10989:1366..10065- (Macrocystis pyrifera P11B4 male)back to top |