mRNA_M-pyrifera_M_contig10978.2038.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10978.2038.1
Unique NamemRNA_M-pyrifera_M_contig10978.2038.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: A0A6H5K2R2_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R2_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 7.500e-122
Identity = 210/439 (47.84%), Postives = 264/439 (60.14%), Query Frame = 3
Query:  243 GTWQGR*FECSRVAVDNALLWLIDNHPAYANVALDIRRLNALGGRGDNT-----------------------------------RRDMR--DRVFAVREEGDGDNCXXXXXXXXDSNV---------GSGEESRGRDYRDETSVRQALERLAAGREDGSDDDAHPPRVDHPRQLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQN-------MTRYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSP--PDIQQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEP--DGRMTDLSRTFLKRFLAR 1388
            GTWQGR F+  +  V+ AL WLI N+PAY++V +DI  L+ LG   D+T                                   RRD R     F  R + D  +          SN          G+GE  +      E  VR  LERLAA R DG D  A   RV HPRQL PLPE +TP+LA+KCFP LFP G  DP  GAR R V F DHV HL+++ D  ++  ++YRF S RLF YWC+DTK+R QAR QC +++  NP  A ++V++V ++   N       M+RY+AN+ G+DG+W  +Q  LE+AV+QL SLTVFTTYSAADHHW+DLHRLMP ++ED    P  QQR + LI+NPHLADWWF +RL+ WK VFLG  M DQ W WDRAEW+SRASLHVHGCS+W  E   +  +TDLSR +LK FLAR
Sbjct:  109 GTWQGREFKALKNCVEIALNWLIANNPAYSSVRIDIENLDRLGRENDDTEHDHVNNFLRLRKAGPPHGAGXXXXXXXXXXXXXTRRDYRYIGAPFPARPDDDVTDPLQAAGGRTTSNTPRESFIPTDGTGETPQ------EDEVRACLERLAA-RRDGGDASA---RVHHPRQLDPLPEHQTPFLATKCFPCLFPRGAADPTSGARRRGVDFVDHVTHLLKFVDAVEEERYHYRFVSHRLFAYWCMDTKVRSQARTQCRMFMNNNPHIAQMSVDEVFDNIWDNVQGIMTHMSRYTANLPGTDGFWQKEQGRLENAVDQLQSLTVFTTYSAADHHWYDLHRLMPGYKEDDDDKPTPQQRTQWLIDNPHLADWWFWQRLQEWKGVFLGRDMGDQRWQWDRAEWQSRASLHVHGCSSWIVEAVRNKHLTDLSRRYLKGFLAR 537          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 6.180e-79
Identity = 143/304 (47.04%), Postives = 192/304 (63.16%), Query Frame = 3
Query:  510 RDYRDETSVRQALERLAAGREDGSDDDAHPPRVDHPRQLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQNMTR----YSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPD-------IQQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLAR 1388
            R   +E ++R+AL  +   R D + + +     ++PR+  P+ E  TP+L S CFP LFP G  DPF  A  R VSF   + HLM++ D  +    +YRFAS R FRYW LD ++R QA+QQC V+LR +    NL   DV + T   + R    Y ANV G+DGYW+  Q  LE ++ QL SLT FTTYSAA+HHW+DL RLMP+   +  P        + +R R LI+NPHLADWW  ER+    ++FLG  MAD  W+W RAEW+SRASLH+HG S+W CE D R+T+LSRT+L+ ++AR
Sbjct:  344 RQQSEEDALREALMDITGYRGDAAGEAS----FEYPRRTGPVRED-TPWLGSMCFPTLFPKGVGDPFGDAGMRSVSFVHFIAHLMKFVDRPEGRAPHYRFASHRTFRYWALDVRLRRQAKQQCRVFLRNHEGLVNLDPTDVDDGTISQLMRIALRYVANVPGTDGYWMRWQGKLEDSLNQLQSLTTFTTYSAANHHWYDLFRLMPASGPEPAPGEGGLIRPVAERTRPLIDNPHLADWWIWERMHKLDEIFLGNAMADASWFWMRAEWQSRASLHIHGMSSWNCEGDRRVTELSRTYLRVYIAR 642          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 1.380e-72
Identity = 173/435 (39.77%), Postives = 234/435 (53.79%), Query Frame = 3
Query:  243 GTWQGR*FECSRVAVDNALLWLIDNHPAYANVALDI-----RRLNALGGRGDNTRRDMRDRVFAVREE----GDGDNCXXXXXXXXDSNVGSGEESRGRDYR----------------------------DETSVRQALERLAAGREDGSDDDAHPPRVDHPRQLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARP--RDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQNM----TRYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPD----------IQQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLAR 1388
            G+W GR F+ S   V  AL +L+ + P Y ++   I     RR      R D    D+      V EE    G GD  XXX         G+GE +R  DYR                            +   +RQ LE +    ++G    A    + +P +  PL E  TP+L S CFP LFP G  D    ++P  R ++  D V HLM++ D  +    YYRFAS R FRYW LD ++R  AR +C ++LR NP   +L   +V + T + +    TRY ANV G+DGYW   +  LE  ++QLPSL+ FTTYSAADHH  DL+RLMP  R    P+          IQ+RNR LI NPH+ADWW  ER++ +KK FLG  MA+  W+WDRAEW+SR++LHVHGCS+W CE + R+T+L+RT+L+  + R
Sbjct:   90 GSWAGRQFKVSLERVQRALNYLMLHSPPYMDIRSRIDMDRVRRHLQDEPREDGGEIDVMRLFHTVTEEPPNPGGGDGXXXXE--------GNGEGAR--DYRGIEPMPDPVEHEERQQSFIPMPGDGRQSEAEILRQQLEHMTNYTDNGQSGAA---TMQYPGREAPLRED-TPWLWSMCFPTLFPDGVGDT---SQPHQRTLTDVDIVTHLMKFVDRPEGEAPYYRFASHRTFRYWALDMRLRKTARLRCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRYVANVPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMP--RAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGR 505          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: A0A6H5KCP2_9PHAE (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP2_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 3.800e-66
Identity = 128/285 (44.91%), Postives = 175/285 (61.40%), Query Frame = 3
Query:  606 VDHPRQLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARP--RDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQNM----TRY--------SANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPD----------IQQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLAR 1388
            + +P Q  PL E  TP+L S CFP LFP G  D    ++P  R ++  D V HLM++ D  +    YYRFAS R FRYW +D ++R  AR QC ++LR NP   +L   +V + T + +    TR+        +    G+DGYW   +  LE  ++QLPSL+ FTTYSAADHH  DL+RLM   R    P+          IQ+RNR LI NPH+ADWW  ER++ +KK FLG  MA+  W+WDRAEW+ R++LHVHGCS+W CE + R+T+L+RT+L+  + R
Sbjct:  515 MQYPGQEAPLRED-TPWLWSMCFPTLFPDGVGDT---SQPHQRTLTDVDIVTHLMKFVDRPEGEAPYYRFASHRTFRYWSVDMRLRKTARLQCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRFRLCRRSPPTPPXPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLM--LRAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQIRSTLHVHGCSSWECEGEERVTELARTYLRGHIGR 793          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.700e-51
Identity = 95/194 (48.97%), Postives = 130/194 (67.01%), Query Frame = 3
Query:  849 KMRLQARQQCSVYLRQNPETANLTVEDVLESTGQNM----TRYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPD----------IQQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLAR 1388
            ++R  AR +C ++LR NP   +L   +V + T + +    TRY ANV G+DGYW   +  LE  ++QLPSL+ FTTYSAADHH  DL+RLMP  R    P+          IQ+RNR LI NPH+ DWW  ER++ +KK FLG  MA+  W+WDRAEW+SR++LHVHGCS+W CE + R+T+L+RT+L+  + R
Sbjct:    2 RLRKTARLRCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRYVANVPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMP--RAGPEPEAGVGAGDVRPIQERNRLLIANPHIEDWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGR 193          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD)

HSP 1 Score: 196 bits (498), Expect = 6.990e-51
Identity = 131/387 (33.85%), Postives = 209/387 (54.01%), Query Frame = 3
Query:  276 RVAVDNALLWLIDNHPAYANVALDIRRLNALGGRGDNTRRDMRDRVFAVREEGDGDNCXXXXXXXXDSNVGSGEESRGRDYRDETSVRQALERLAAGREDGSDDDAHPPRV--DHPRQL-----HPLPEQRTPYLASKCFPWLFPGGRTDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQN--------MTRYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPDI--QQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLA 1385
            R  V +AL WLI N+P Y++V +D   LNAL    DN   D+   +  V+ +   DN         D++      S  R Y + T +   L     G E   + DA   ++  D P         PL E +TP+LA+  FP LFP G+ DP   A  RDVS  D V+HL+++A+ + +G + YRFAS   F YW L+   R +  +Q  ++L+QNP  ++LT++++      N        ++RY AN++G++ YW   +E+L++ V  + + T F T+S+AD HW +LH L   F + +  ++  Q R + +I+NPHL DW+F++RL  + K +L   + D  W+W R E++ R S+H HG +    +P   + DL++  LK +LA
Sbjct:   86 RQKVHDALTWLIQNNPHYSDVQIDQEALNALP---DN---DVPYDLLTVQTDETSDNNEPDLGPPTDNH------SEDRVYNESTDMSSFL---PIGEEQEQEIDAVRQQLLGDEPMSWPTVEDQPLNEYQTPFLATMAFPTLFPDGKGDPTNQALARDVSLLDRVRHLIKFAE-KVNGKWVYRFASHPRFSYWALNMIQRKRTLEQTGIFLKQNPSESHLTIDELRGMAESNSSAVFMPKVSRYVANIAGTNAYWHKVKEDLKAIVTNVGTPTFFFTFSSADMHWPELHSL---FYDGNVSELSSQDRRQNVIDNPHLVDWFFTQRLESFIKYWLHDTL-DAKWHWYRFEYQGRGSIHCHGTAKLNNDPG--LCDLTKVALKGYLA 450          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: A0A6S7HTR0_PARCT (Helitron_like_N domain-containing protein (Fragment) n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HTR0_PARCT)

HSP 1 Score: 183 bits (465), Expect = 3.400e-49
Identity = 126/396 (31.82%), Postives = 208/396 (52.53%), Query Frame = 3
Query:  285 VDNALLWLIDNHPAYANVALDIRRLNALGGRGDNTRRDMRDRVFAVREEGD---GDNCXXXXXXXXDSNVGSGEESRGRD--YRDETSV-------RQALERLAAGREDGSDDDAHP-PRVDHPRQLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQNMT--------RYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFRED----SPPDIQQRNRALIENPHLADWWFSERL----RHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLA 1385
            V NAL+WLI+N+P Y+ + ++   LN+L   G      +   +  V  + D    DNC          +VG   ++   D  Y D T +        Q  + + A R   S+++  P P V++     PL E +  +LA+  FP LFP G+ DP      RDV   + +KHL+++A++ D G + YRFA+   F YW  +   R +  QQ  ++L+QNP  A+LT++++ E    N T        RY  N++G++ YW   +E L++ +  + + T+F T+S+AD HW +LH L  +  ++    S  D++++N  +I NPH+ DW+F++RL    +HW    LG +     W+W R E++ R S+H HG +    +P   +  L++T LK FLA
Sbjct:   62 VHNALVWLINNNPHYSELLINEDALNSLPEDG------VPPGLMTVETDDDIVSDDNCSP--------DVGPPTDNPSEDIVYNDSTEMSSFLPVGEQQQQEIEAVRNQLSENEPMPWPSVEN----EPLNEYQISHLATMAFPTLFPDGKGDPTNQGLLRDVPLHERIKHLLKFAEIID-GKWVYRFANHPRFSYWAFNMIQRKRILQQSGIFLKQNPGEAHLTIDELREMAASNNTNVFMSKVSRYVGNIAGTNAYWNRVREELKAIITSVGAPTLFFTFSSADMHWPELHALFKTDTDNELGNSTSDVRRQN--VINNPHVVDWFFTQRLESFVKHWLYDTLGAK-----WHWFRYEYQGRGSIHCHGTAKLNNDPG--LCQLTQTALKGFLA 429          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: UPI00109B8421 (uncharacterized protein LOC110252718 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B8421)

HSP 1 Score: 183 bits (465), Expect = 6.010e-49
Identity = 124/380 (32.63%), Postives = 204/380 (53.68%), Query Frame = 3
Query:  285 VDNALLWLIDNHPAYANVALDIRRLNALGGRGDNTRRDMRDRVFAVREEG--DGDNCXXXXXXXXDSNVGSGEESRGRDYRDETSV--RQALERLAAGREDGSDDDAHPPRVDHPRQLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQN--------MTRYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPDIQQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLAR 1388
            V +ALLWL +N+P Y++V +D   LNAL   G        D +    +E     +N         D+       +   D      V  +Q  E  A   +  +++  + P V    Q  P+ E +TP+LA+  FP LFP G+ DP   A   DV  A+ VKHL+++A+   +G + YRFAS   F YW  +  +R +  QQ  ++L+QNP  A+LT++++ E    +        ++RY AN++G++ YW   +E+L++ V  + + T+F T+S+AD HW +LH L  +   DS    +QR + +I NPH+ DW+F++RL ++ K +L   + D  W+W R E++ R S+H HG +    +P   + +L++  LK FLA+
Sbjct:   89 VYDALLWLTNNNPHYSDVEIDEHALNALPINGVPV-----DLLTVESDEAIISDNNAEVDLGPPTDNPFEDRAYNESIDMSSFLPVGEQQQQELDAVRNQISANEPLNWPTV----QDRPVNEYQTPFLATMAFPTLFPDGKGDPTNQALVMDVPLAERVKHLIKFAE-NVNGKWIYRFASHPRFAYWAFNMILRKRTLQQSGIFLKQNPGEAHLTIDELREMAESDNSVVFMCKVSRYVANIAGTNAYWHRVKEDLKAIVTNVGTPTLFFTFSSADMHWPELHALFQN--NDSSFTSEQRRQNVINNPHIVDWFFTQRLDNFMKYWLYGTL-DAKWHWYRFEYQGRGSIHCHGTAKLNNDPG--LCELTKIALKGFLAK 453          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: UPI00109BD642 (uncharacterized protein LOC110247456 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BD642)

HSP 1 Score: 185 bits (469), Expect = 1.250e-48
Identity = 127/379 (33.51%), Postives = 199/379 (52.51%), Query Frame = 3
Query:  303 WLIDNHPAYANVALDIRRLNALGGRGDNTRRDMRDRVFAVREEGDGDNCXXXXXXXXDSNVGSGEESRGRDYRDETSV-------RQALERLAAGREDGSDDDAHP-PRVDHPRQLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDVLESTGQN--------MTRYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPDI--QQRNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRMTDLSRTFLKRFLA 1385
            WLI N+P Y++V +D   LNAL    DN   D+      V      D+         D    +   S    Y D T         +Q  + + A R+  S D+    P VD+     PL E + P+LA+  FP LFP G+ DP   A  RDVS  D VKHL+++A+ + DG + YRFAS   F YW  +   R +  +Q  ++L+QNP  A+LT+ ++ E    N        ++RY AN++G++ YW   +E+L++ +  + + T F T+S+AD HW +LH L   F + +  +I  Q R + +I NPH+ DW+F++RL  + K +L   + D  W+W R E++ R S+H HG +    +P   + DL++  L+ +LA
Sbjct:    3 WLIQNNPLYSDVQIDYEALNALP---DN---DIPSDTSTVET----DDNIVSDDNKPDLGPPTDNTSEDTVYNDSTEXSSFLPYGQQQEQEINAVRQQLSGDEPMSWPTVDN----RPLNEYQIPFLATMAFPTLFPDGKGDPTNQALTRDVSLLDRVKHLIKFAE-KIDGKWVYRFASHPRFSYWAFNMIQRKRTLEQTGIFLKQNPSEAHLTIYELREMAENNDSTSFLSKVSRYVANIAGTNAYWHKVKEDLKAIITNVGTPTFFFTFSSADMHWPELHSL---FYDATNTEISSQGRRQNVINNPHIVDWFFTQRLESFVKCWLYDTL-DAKWHWYRFEYQGRGSIHCHGTAKLKNDPG--LCDLTKVALRGYLA 360          
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Match: UPI0010692B95 (uncharacterized protein LOC114526576 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI0010692B95)

HSP 1 Score: 179 bits (455), Expect = 4.780e-48
Identity = 122/383 (31.85%), Postives = 195/383 (50.91%), Query Frame = 3
Query:  264 FECSRVAVDNALLWLIDNHPAYANVALDIRRLNALGGRG--DNTRRDMRDRVFAVREEGDG---DNCXXXXXXXXDSNVGSGEES----RGRDYRDETSVRQALERLAAGREDGSDDDAHPPRVDHPR-QLHPLPEQRTPYLASKCFPWLFPGGRTDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDTKMRLQARQQCSVYLRQNPETANLTVEDV---LESTGQN-----MTRYSANVSGSDGYWLSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPDIQQRNRALIENPHLADWWFSERL----RHWKKVFLGPQMADQLWYWDRAEWKSRASLHVHGCSAWGCEPDGRM 1346
            F   R  V  A+LWL  N+P + ++ +D   + +L   G  +  R    D    V  E +G   +          +  +G+G  S    R R  +D  +++ A+  +                +D P  + + + E +T  LAS  FP LFP G+ DP    +  +VS A+  KHLM++A+   +G F +RFAS   F YW L+ K R Q   Q ++YLRQ+P  AN+T+E++   + S   N     + RY + + G++ YW  + + L + +EQ    T F T+SAAD HW DL RL+ S   +      +R +A+I+NPH+ DW+F +RL    +HW +  LG +     W+W R E+++R S+H HGC+    +PD R+
Sbjct:   15 FTVRRHRVLEAILWLKTNNPFFKDIEIDRDIIQSLPENGVPEELRYIFDDNELPVHVENEGPPQEPVMSANATVEELVLGNGSTSFIPMRQRQRKDGAAIQDAVNEVDP--------------LDWPSTEGNAVNEFKTDGLASMAFPTLFPHGKGDPTNRVKQHEVSLAEAFKHLMKFAERLPNGKFEWRFASHPRFPYWALNMKQRHQLLSQANIYLRQHPADANMTMEELKTMVNSMSANQMVNRLQRYVSKIQGTNQYWYQRLQELLALIEQKVCPTFFFTFSAADSHWPDLQRLLQS---NEGASRTERAQAVIDNPHMTDWFFMQRLQEFIKHWLQGVLGAE-----WFWYRFEYQARGSIHAHGCAKLKNDPDIRL 375          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10978.2038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2R2_9PHAE7.500e-12247.84Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5K692_9PHAE6.180e-7947.04ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE1.380e-7239.77ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KCP2_9PHAE3.800e-6644.91Helitron_like_N domain-containing protein (Fragmen... [more]
A0A6H5KIQ7_9PHAE1.700e-5148.97ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI000A2A83DD6.990e-5133.85uncharacterized protein LOC110235051 n=1 Tax=Exaip... [more]
A0A6S7HTR0_PARCT3.400e-4931.82Helitron_like_N domain-containing protein (Fragmen... [more]
UPI00109B84216.010e-4932.63uncharacterized protein LOC110252718 n=1 Tax=Exaip... [more]
UPI00109BD6421.250e-4833.51uncharacterized protein LOC110247456 n=1 Tax=Exaip... [more]
UPI0010692B954.780e-4831.85uncharacterized protein LOC114526576 n=2 Tax=Dendr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10978contigM-pyrifera_M_contig10978:7343..8899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score143.3
Seed ortholog evalue2.1e-31
Seed eggNOG ortholog400682.PAC_15725762
Hectar predicted targeting categoryother localisation
EggNOG OGs2CC8B@1,2S3BW@2759,3A3QP@33154,3C1YH@33208
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons4
Model size1388
Cds size990
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10978.2038.1prot_M-pyrifera_M_contig10978.2038.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10978 7754..8899 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815608.02762-UTR-M-pyrifera_M_contig10978:7342..75821622815608.02762-UTR-M-pyrifera_M_contig10978:7342..7582Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10978 7343..7582 +
1692277485.2795818-UTR-M-pyrifera_M_contig10978:7342..75821692277485.2795818-UTR-M-pyrifera_M_contig10978:7342..7582Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10978 7343..7582 +
1622815608.0418415-UTR-M-pyrifera_M_contig10978:7595..77531622815608.0418415-UTR-M-pyrifera_M_contig10978:7595..7753Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10978 7596..7753 +
1692277485.289813-UTR-M-pyrifera_M_contig10978:7595..77531692277485.289813-UTR-M-pyrifera_M_contig10978:7595..7753Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10978 7596..7753 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815608.0518248-CDS-M-pyrifera_M_contig10978:7753..78791622815608.0518248-CDS-M-pyrifera_M_contig10978:7753..7879Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10978 7754..7879 +
1692277485.2987535-CDS-M-pyrifera_M_contig10978:7753..78791692277485.2987535-CDS-M-pyrifera_M_contig10978:7753..7879Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10978 7754..7879 +
1622815608.0671434-CDS-M-pyrifera_M_contig10978:8014..84431622815608.0671434-CDS-M-pyrifera_M_contig10978:8014..8443Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10978 8015..8443 +
1692277485.3093636-CDS-M-pyrifera_M_contig10978:8014..84431692277485.3093636-CDS-M-pyrifera_M_contig10978:8014..8443Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10978 8015..8443 +
1622815608.080607-CDS-M-pyrifera_M_contig10978:8464..88991622815608.080607-CDS-M-pyrifera_M_contig10978:8464..8899Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10978 8465..8899 +
1692277485.3179097-CDS-M-pyrifera_M_contig10978:8464..88991692277485.3179097-CDS-M-pyrifera_M_contig10978:8464..8899Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10978 8465..8899 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10978.2038.1

>prot_M-pyrifera_M_contig10978.2038.1 ID=prot_M-pyrifera_M_contig10978.2038.1|Name=mRNA_M-pyrifera_M_contig10978.2038.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=330bp
MRDRVFAVREEGDGDNCNNHNNSGSDSNVGSGEESRGRDYRDETSVRQAL
ERLAAGREDGSDDDAHPPRVDHPRQLHPLPEQRTPYLASKCFPWLFPGGR
TDPFFGARPRDVSFADHVKHLMRYADVRDDGTFYYRFASDRLFRYWCLDT
KMRLQARQQCSVYLRQNPETANLTVEDVLESTGQNMTRYSANVSGSDGYW
LSQQENLESAVEQLPSLTVFTTYSAADHHWFDLHRLMPSFREDSPPDIQQ
RNRALIENPHLADWWFSERLRHWKKVFLGPQMADQLWYWDRAEWKSRASL
HVHGCSAWGCEPDGRMTDLSRTFLKRFLAR
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mRNA from alignment at M-pyrifera_M_contig10978:7343..8899+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10978.2038.1 ID=mRNA_M-pyrifera_M_contig10978.2038.1|Name=mRNA_M-pyrifera_M_contig10978.2038.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1557bp|location=Sequence derived from alignment at M-pyrifera_M_contig10978:7343..8899+ (Macrocystis pyrifera P11B4 male)
AGGTTTAGCGCGGGAAACTACATGGTGCCTATTGCGGTTCCGCTGCCCCT TCAGAACCTACGCCTGCTAGAGAAACAGCTTATCGCTTTGGCTCATCCCA TTGCTAGAGTTGTTCGCCTCAAAGGCGGTGCTCAGTACGGTTATCGCGGT CACATACTCAACGTGGCAAGGGACGTCACCACCTTCGCGACGTCGCTTCC GTGGAACGCAAACTCCGATGACATTCCTATCATCATCATTGTCCCGCCCG GAGGTGGTACTTGGCAAGGAAGATAATTCGAGTGTTCCCGGGTTGCCGTC GATAATGCCCTCCTGTGGTTGATTGATAACCACCCCGCCTACGCCAACGT CGCCCTCGATATTAGGCGCCTCAATGCCCTTGGTGGCCGAGGGGATAACA CTAGACGTGACATGAGGGACCGGGTTTTCGCCGTCCGAGAGGAGGGCGAC GGTGACAACTGTAACAACCATAACAACAGCGGCAGCGACAGCAACGTCGG TTCCGGCGAGGAAAGTCGGGGCCGTGACTATAGGGATGTGGGCGCGCCTG GGGCCGGCGGTAGCGACGACGAGGTAGACGACCCTGTCGATGCCGCCGGT CGTGGTACGCGCGGTGCACGCCCACCTAGGGAGTCCTTCATTCCCGCCGA CGGGATCGATAGTGTTACTGAGGAAACTTCTGTGCGACAGGCGTTGGAGC GACTCGCTGCTGGCAGGGAGGATGGGAGCGATGATGACGCCCATCCCCCC CGGGTTGACCATCCGCGGCAATTGCATCCTTTGCCGGAACAAAGGACGCC ATACCTCGCCTCCAAATGTTTCCCCTGGCTGTTCCCGGGTGGAAGAACAG ACCCCTTCTTCGGCGCGCGACCGAGGGACGTTTCGTTCGCCGACCATGTT AAGCACTTGATGCGTTATGCCGATGTTCGCGACGACGGAACGTTCTACTA CCGCTTCGCAAGTGATCGGCTCTTCCGTTACTGGTGTTTAGACACGAAGA TGCGTCTGCAGGCTAGGCAGCAATGTAGTGTCTATCTCCGTCAGAACCCG GAGACCGCGAACTTGACGGTCGAAGACGTCTTGGAAAGCACTGGACAAAA CGTTAGATCCACCATAGGTTAGATGACACGGTACAGCGCCAATGTCTCCG GGAGCGATGGTTACTGGCTCAGCCAGCAAGAAAACCTGGAAAGCGCCGTG GAGCAACTGCCCAGCCTCACAGTATTCACGACGTACTCCGCCGCCGATCA TCATTGGTTCGATCTCCACCGCCTTATGCCGTCATTTCGAGAAGATTCTC CGCCCGACATTCAACAACGTAACCGCGCGTTGATCGAAAACCCCCACCTC GCCGATTGGTGGTTTTCGGAGCGTTTGCGTCACTGGAAAAAGGTCTTCCT TGGTCCGCAGATGGCTGATCAGTTGTGGTATTGGGACCGTGCTGAGTGGA AGTCTCGGGCTAGCCTGCACGTGCACGGGTGCAGCGCTTGGGGATGCGAG CCCGACGGGCGTATGACAGACCTGTCGCGTACTTTTCTAAAACGTTTCTT GGCGCGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10978:7343..8899+

>mRNA_M-pyrifera_M_contig10978.2038.1 ID=mRNA_M-pyrifera_M_contig10978.2038.1|Name=mRNA_M-pyrifera_M_contig10978.2038.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1980bp|location=Sequence derived from alignment at M-pyrifera_M_contig10978:7343..8899+ (Macrocystis pyrifera P11B4 male)
ATGAGGGACCGGGTTTTCGCCGTCCGAGAGGAGGGCGACGGTGACAACTG
TAACAACCATAACAACAGCGGCAGCGACAGCAACGTCGGTTCCGGCGAGG
AAAGTCGGGGCCGTGACTATAGGGATATGAGGGACCGGGTTTTCGCCGTC
CGAGAGGAGGGCGACGGTGACAACTGTAACAACCATAACAACAGCGGCAG
CGACAGCAACGTCGGTTCCGGCGAGGAAAGTCGGGGCCGTGACTATAGGG
ATGAAACTTCTGTGCGACAGGCGTTGGAGCGACTCGCTGCTGGCAGGGAG
GATGGGAGCGATGATGACGCCCATCCCCCCCGGGTTGACCATCCGCGGCA
ATTGCATCCTTTGCCGGAACAAAGGACGCCATACCTCGCCTCCAAATGTT
TCCCCTGGCTGTTCCCGGGTGGAAGAACAGACCCCTTCTTCGGCGCGCGA
CCGAGGGACGTTTCGTTCGCCGACCATGTTAAGCACTTGATGCGTTATGC
CGATGTTCGCGACGACGGAACGTTCTACTACCGCTTCGCAAGTGATCGGC
TCTTCCGTTACTGGTGTTTAGACACGAAGATGCGTCTGCAGGCTAGGCAG
CAATGTAGTGTCTATCTCCGTCAGAACCCGGAGACCGCGAACTTGACGGT
CGAAGACGTCTTGGAAAGCACTGGACAAAACGAAACTTCTGTGCGACAGG
CGTTGGAGCGACTCGCTGCTGGCAGGGAGGATGGGAGCGATGATGACGCC
CATCCCCCCCGGGTTGACCATCCGCGGCAATTGCATCCTTTGCCGGAACA
AAGGACGCCATACCTCGCCTCCAAATGTTTCCCCTGGCTGTTCCCGGGTG
GAAGAACAGACCCCTTCTTCGGCGCGCGACCGAGGGACGTTTCGTTCGCC
GACCATGTTAAGCACTTGATGCGTTATGCCGATGTTCGCGACGACGGAAC
GTTCTACTACCGCTTCGCAAGTGATCGGCTCTTCCGTTACTGGTGTTTAG
ACACGAAGATGCGTCTGCAGGCTAGGCAGCAATGTAGTGTCTATCTCCGT
CAGAACCCGGAGACCGCGAACTTGACGGTCGAAGACGTCTTGGAAAGCAC
TGGACAAAACATGACACGGTACAGCGCCAATGTCTCCGGGAGCGATGGTT
ACTGGCTCAGCCAGCAAGAAAACCTGGAAAGCGCCGTGGAGCAACTGCCC
AGCCTCACAGTATTCACGACGTACTCCGCCGCCGATCATCATTGGTTCGA
TCTCCACCGCCTTATGCCGTCATTTCGAGAAGATTCTCCGCCCGACATTC
AACAACGTAACCGCGCGTTGATCGAAAACCCCCACCTCGCCGATTGGTGG
TTTTCGGAGCGTTTGCGTCACTGGAAAAAGGTCTTCCTTGGTCCGCAGAT
GGCTGATCAGTTGTGGTATTGGGACCGTGCTGAGTGGAAGTCTCGGGCTA
GCCTGCACGTGCACGGGTGCAGCGCTTGGGGATGCGAGCCCGACGGGCGT
ATGACAGACCTGTCGCGTACTTTTCTAAAACGTTTCTTGGCGCGGATGAC
ACGGTACAGCGCCAATGTCTCCGGGAGCGATGGTTACTGGCTCAGCCAGC
AAGAAAACCTGGAAAGCGCCGTGGAGCAACTGCCCAGCCTCACAGTATTC
ACGACGTACTCCGCCGCCGATCATCATTGGTTCGATCTCCACCGCCTTAT
GCCGTCATTTCGAGAAGATTCTCCGCCCGACATTCAACAACGTAACCGCG
CGTTGATCGAAAACCCCCACCTCGCCGATTGGTGGTTTTCGGAGCGTTTG
CGTCACTGGAAAAAGGTCTTCCTTGGTCCGCAGATGGCTGATCAGTTGTG
GTATTGGGACCGTGCTGAGTGGAAGTCTCGGGCTAGCCTGCACGTGCACG
GGTGCAGCGCTTGGGGATGCGAGCCCGACGGGCGTATGACAGACCTGTCG
CGTACTTTTCTAAAACGTTTCTTGGCGCGG
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