mRNA_M-pyrifera_M_contig109378.1955.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig109378.1955.1
Unique NamemRNA_M-pyrifera_M_contig109378.1955.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: A0A7S2N8V8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N8V8_9EUKA)

HSP 1 Score: 134 bits (337), Expect = 4.640e-37
Identity = 78/155 (50.32%), Postives = 91/155 (58.71%), Query Frame = 1
Query:    7 EDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGR-WKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGEGP-DIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPHS-DVIHF 462
            EDL F  A    G  LHRAG  PLVLYR+  T  S  +PRQ +   R +A E  +L    W  R F+IWGAGRDG+ FF+ LSP  +  V AF D+D KKIGT  +  E    I+ F    PP VTCVALDRT+G FE NLASL L    D  HF
Sbjct:   23 EDLVFLQAHVARGGLLHRAGHDPLVLYRYHSTMASHAIPRQTILRHRASAIESAVLSTPPW--RSFTIWGAGRDGRAFFKTLSPATRHRVAAFCDVDMKKIGTSYQYFEHHVPIVSFEAAHPPFVTCVALDRTNGAFEANLASLGLVEGVDYYHF 175          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: A0A0M0K5X0_9EUKA (Udp-c:betagal beta--n-acetylglucosaminyltransferase-like protein 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K5X0_9EUKA)

HSP 1 Score: 135 bits (339), Expect = 8.780e-35
Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 1
Query:    7 EDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRIL---QGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGEG-PDIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPH-SDVIH 459
            EDL F HA  R GA L+R    PLV+YR+   + +  +PRQ +   RVAAFE   L    G W    F+IWGAGRDG+ FF+ LS +A+  V AF D+D KK+GT  +  E    ++H+++ QPP V CV LDRT+G FE NLASL L   +D +H
Sbjct:  289 EDLLFLHAHVRRGAPLYRVDGPPLVVYRYHAAAATHAIPRQTILGHRVAAFERDQLGAQHGAWS--RFTIWGAGRDGRDFFKRLSSEARSRVLAFCDVDAKKVGTTYQYYEHFVPVVHYTQAQPPFVLCVCLDRTNGAFEANLASLGLREGADYLH 442          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: A0A8J4PRN9_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRN9_9MYCE)

HSP 1 Score: 133 bits (335), Expect = 1.040e-33
Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 1
Query:    4 PEDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGEGP---DIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPHS-DVIHF 462
            PEDL FFH     G  LH+ G APL++YR+   + S  + R +L  VR+   E R+L  +W   +FSIWGAG+DG+ FF  LS  +K  V++F D+D KKIG        P    IIHF  ++PP++ CVALDR++  FE NLASL+L    D  HF
Sbjct:  388 PEDLIFFHRHIEHGGTLHKVGPAPLLVYRYHANNISNLIHRHMLMKVRIEYLEKRVLS-QWP--KFSIWGAGKDGKKFFTLLSDTSKAKVESFCDVDEKKIGHNYNAAYTPYSVPIIHFKNVKPPLIICVALDRSNNEFENNLASLNLEEGKDYWHF 541          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: A0A151ZAJ5_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAJ5_9MYCE)

HSP 1 Score: 126 bits (317), Expect = 2.350e-31
Identity = 72/157 (45.86%), Postives = 91/157 (57.96%), Query Frame = 1
Query:    4 PEDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGEGP---DIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPHS-DVIHF 462
            PEDL FFH        L      PLVLYR+   + S ++ R +L  VR+   E RIL    K  +FSIWGAGRDG+ FF  LS  +K  V +F D+D +K+GT       P    IIHFS+++PP + CVALDR++G FE NL SL L  S D  HF
Sbjct:  340 PEDLIFFHQHLNYQDALLSKVHQPLVLYRYHSNNQSNQIHRLILMKVRIQYLESRILS---KWDKFSIWGAGRDGKKFFTMLSDSSKSKVTSFCDVDDQKVGTTYNAAYTPYKIPIIHFSQVKPPFIICVALDRSNGEFEANLQSLQLKESIDYYHF 493          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: A0A7S4EW01_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EW01_CHRCT)

HSP 1 Score: 118 bits (296), Expect = 4.650e-29
Identity = 68/154 (44.16%), Postives = 88/154 (57.14%), Query Frame = 1
Query:    7 EDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGE-GPDIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPH-SDVIHF 462
            EDL F       G  LHR    PL+ Y +   + S  + R  L   R AA E  +L G W+   FSIWGAGRDG+  F+ LSP+A+  V  F D+D  K+GTK +  E    +IH+  +  P++TCVALDRTDG FE NLASL L   +D  +F
Sbjct:  214 EDLLFLLEHVARGGRLHRVEGDPLLTYTYHAHAASHSISRATLLRHRAAALERAVLGG-WQ--TFSIWGAGRDGRALFKALSPEARRKVSCFCDVDECKVGTKYQYYEYSVPVIHWRNVNRPLITCVALDRTDGAFEANLASLGLREGADFFYF 364          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: F4PNJ0_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PNJ0_CAVFA)

HSP 1 Score: 119 bits (298), Expect = 7.700e-29
Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = 1
Query:    4 PEDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTK---ARGGEGPDIIHFSELQPPVVTCVALDRTDGVFEGNLASLHL 438
            PEDL FFH       ++ +  D PL++YR+ P + S ++ R +L  VR+   E R+L   W    FSIWG GRDG+ FF  LS + K  V +F D+D KKIGT    +  G    IIH+S+++PP++ CV++DRT+  FE NL SL+L
Sbjct:  299 PEDLLFFHKHLDNKGKITKV-DKPLLIYRYHPDNLSKQIHRLVLLKVRLEHLERRVLNN-WSS--FSIWGVGRDGKKFFTMLSKENKDKVVSFCDVDVKKIGTTHHCSLTGHNVPIIHWSQVKPPIILCVSIDRTNSEFENNLKSLNL 442          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: A0A7S4B6J0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6J0_CHRCT)

HSP 1 Score: 110 bits (274), Expect = 8.060e-28
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 1
Query:   61 AGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGE-GPDIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPH-SDVIHF 462
            AGD PL+ Y +   + S  + R  L   R AA E  +L G W+   FSIWGAGRDG+  F+ LSP+A+  V  F D+D  K+GTK +  E    +IH+  +  P++TCVALDRTDG FE NLASL L   +D  +F
Sbjct:   22 AGD-PLLTYTYHAHAASHSISRATLLRHRAAALERAVLGG-WQ--TFSIWGAGRDGRALFKALSPEARRKVSCFCDVDECKVGTKYQYYEYSVPVIHWRNVNRPLITCVALDRTDGAFEANLASLGLREGADFFYF 153          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: A0A7S0PX91_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PX91_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 1.390e-26
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 1
Query:    7 EDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGEGP-DIIHFSELQPPVVTCVALDRTDGVFE 414
            EDL F  A    G EL+R    PL+ Y +  ++ +  + RQ +   RV A E  +L+  W    F+IWGAGRDG+ FF+ L P+ +  V AF D+D +K+GT  +  E    I+H+ ++QPP VTCVALDRT+G FE
Sbjct:  191 EDLLFLLAHVAAGGELYRVDGQPLLTYTYHQSAATHSISRQTILRHRVQAIERDVLE-HWPC--FTIWGAGRDGRAFFKALQPKTRRKVSAFYDVDERKVGTIYQYFENRVPILHWRDIQPPFVTCVALDRTNGAFE 324          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: D8M4Y4_BLAHO (Glyco_trans_2-like domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M4Y4_BLAHO)

HSP 1 Score: 111 bits (278), Expect = 2.920e-26
Identity = 61/150 (40.67%), Postives = 86/150 (57.33%), Query Frame = 1
Query:    1 FPEDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGEGP------DIIHFSELQPPVVTCVALDRTDGVFEGNLASL 432
            +PEDL F+H    +  EL R     L++YR    +   ++PR+ +  V++ A E R+L        FS+WGAGRDG+ F   LS + +  V  F D+D KK+G   R    P       I+H+SELQPPV+ CVAL RT+GVFE N+ S+
Sbjct:  207 YPEDLDFYHRHLDLHGEL-RVVPEVLLMYRMHDHNTCAKIPRRKILRVKLRALERRVLNSL---DHFSVWGAGRDGRNFVNDLSEKNRKKVVCFGDVDVKKVGNLERIRANPLTDVDLPIVHYSELQPPVICCVALGRTNGVFESNVQSM 352          
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Match: F0Z7A8_DICPU (Glyco_trans_2-like domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z7A8_DICPU)

HSP 1 Score: 112 bits (280), Expect = 5.570e-26
Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = 1
Query:   73 PLVLYRFSPTSFSWRVPRQLLAAVRVAAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPKKIGTKARGGEGP---DIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPH-SDVIHF 462
            PL++YR+   + S ++ + +L  VR+   E R+L    K   F+IWGAG+DG+ FF  LS  +K  V AF D+D  KIG K      P    IIHFS+ +PP+V CVALDR++G FE NL SL+L   ++  HF
Sbjct:  429 PLLVYRYHENNLSSQIHKHMLMKVRIEYLERRVLS---KWSSFTIWGAGKDGKKFFTLLSDSSKKKVTAFCDVDKNKIGQKYNAAYTPYSVPIIHFSQAKPPLVICVALDRSNGEFENNLNSLNLKEGTEYWHF 559          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109378.1955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2N8V8_9EUKA4.640e-3750.32Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0M0K5X0_9EUKA8.780e-3547.44Udp-c:betagal beta--n-acetylglucosaminyltransferas... [more]
A0A8J4PRN9_9MYCE1.040e-3345.22Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A151ZAJ5_9MYCE2.350e-3145.86Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
A0A7S4EW01_CHRCT4.650e-2944.16Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
F4PNJ0_CAVFA7.700e-2943.24Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
A0A7S4B6J0_CHRCT8.060e-2846.32Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0PX91_9EUKA1.390e-2643.07Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
D8M4Y4_BLAHO2.920e-2640.67Glyco_trans_2-like domain-containing protein n=1 T... [more]
F0Z7A8_DICPU5.570e-2644.03Glyco_trans_2-like domain-containing protein n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109378contigM-pyrifera_M_contig109378:136..603 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score116.7
Seed ortholog evalue9.7e-24
Seed eggNOG ortholog157072.XP_008875757.1
Preferred nameB3GNTL1
KEGG koko:K14529
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
EggNOG free text desc.dolichyl-phosphate beta-glucosyltransferase activity
EggNOG OGsCOG0463@1,KOG2977@2759
EC3.1.26.5
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016
Exons1
Model size468
Cds size468
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815603.7462199-CDS-M-pyrifera_M_contig109378:135..6031622815603.7462199-CDS-M-pyrifera_M_contig109378:135..603Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109378 136..603 -
1692277483.3293927-CDS-M-pyrifera_M_contig109378:135..6031692277483.3293927-CDS-M-pyrifera_M_contig109378:135..603Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109378 136..603 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109378.1955.1prot_M-pyrifera_M_contig109378.1955.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig109378 136..603 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig109378.1955.1

>prot_M-pyrifera_M_contig109378.1955.1 ID=prot_M-pyrifera_M_contig109378.1955.1|Name=mRNA_M-pyrifera_M_contig109378.1955.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
FPEDLAFFHAAGRIGAELHRAGDAPLVLYRFSPTSFSWRVPRQLLAAVRV
AAFEHRILQGRWKGREFSIWGAGRDGQTFFRFLSPQAKLLVKAFADIDPK
KIGTKARGGEGPDIIHFSELQPPVVTCVALDRTDGVFEGNLASLHLPHSD
VIHFA*
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mRNA from alignment at M-pyrifera_M_contig109378:136..603-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig109378.1955.1 ID=mRNA_M-pyrifera_M_contig109378.1955.1|Name=mRNA_M-pyrifera_M_contig109378.1955.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig109378:136..603- (Macrocystis pyrifera P11B4 male)
TTCCCAGAAGATTTGGCATTCTTTCATGCTGCAGGGAGGATAGGTGCAGA GTTGCATCGAGCTGGAGATGCACCTCTTGTGCTCTACCGCTTCTCACCAA CTTCGTTTTCATGGCGAGTACCAAGACAATTGCTTGCTGCTGTCCGTGTT GCTGCATTTGAACACAGAATCTTGCAGGGTCGATGGAAAGGGAGGGAGTT TTCGATTTGGGGTGCTGGGAGAGATGGACAAACATTTTTCAGGTTCCTCT CACCACAAGCAAAGTTATTAGTCAAAGCATTTGCAGATATTGACCCGAAG AAGATCGGAACCAAAGCCAGAGGCGGAGAAGGGCCGGACATTATCCATTT TTCGGAATTACAACCTCCTGTTGTGACTTGTGTTGCTCTTGACCGCACAG ATGGTGTTTTTGAAGGCAATCTTGCATCTTTACACCTACCACATAGTGAC GTAATTCATTTTGCATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig109378:136..603-

>mRNA_M-pyrifera_M_contig109378.1955.1 ID=mRNA_M-pyrifera_M_contig109378.1955.1|Name=mRNA_M-pyrifera_M_contig109378.1955.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig109378:136..603- (Macrocystis pyrifera P11B4 male)
TTCCCAGAAGATTTGGCATTCTTTCATGCTGCAGGGAGGATAGGTGCAGA
GTTGCATCGAGCTGGAGATGCACCTCTTGTGCTCTACCGCTTCTCACCAA
CTTCGTTTTCATGGCGAGTACCAAGACAATTGCTTGCTGCTGTCCGTGTT
GCTGCATTTGAACACAGAATCTTGCAGGGTCGATGGAAAGGGAGGGAGTT
TTCGATTTGGGGTGCTGGGAGAGATGGACAAACATTTTTCAGGTTCCTCT
CACCACAAGCAAAGTTATTAGTCAAAGCATTTGCAGATATTGACCCGAAG
AAGATCGGAACCAAAGCCAGAGGCGGAGAAGGGCCGGACATTATCCATTT
TTCGGAATTACAACCTCCTGTTGTGACTTGTGTTGCTCTTGACCGCACAG
ATGGTGTTTTTGAAGGCAATCTTGCATCTTTACACCTACCACATAGTGAC
GTAATTCATTTTGCATAATTCCCAGAAGATTTGGCATTCTTTCATGCTGC
AGGGAGGATAGGTGCAGAGTTGCATCGAGCTGGAGATGCACCTCTTGTGC
TCTACCGCTTCTCACCAACTTCGTTTTCATGGCGAGTACCAAGACAATTG
CTTGCTGCTGTCCGTGTTGCTGCATTTGAACACAGAATCTTGCAGGGTCG
ATGGAAAGGGAGGGAGTTTTCGATTTGGGGTGCTGGGAGAGATGGACAAA
CATTTTTCAGGTTCCTCTCACCACAAGCAAAGTTATTAGTCAAAGCATTT
GCAGATATTGACCCGAAGAAGATCGGAACCAAAGCCAGAGGCGGAGAAGG
GCCGGACATTATCCATTTTTCGGAATTACAACCTCCTGTTGTGACTTGTG
TTGCTCTTGACCGCACAGATGGTGTTTTTGAAGGCAATCTTGCATCTTTA
CACCTACCACATAGTGACGTAATTCATTTTGCATAA
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