mRNA_M-pyrifera_M_contig10934.1947.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10934.1947.1 vs. uniprot
Match: A0A6H5KJ76_9PHAE (DUF1981 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ76_9PHAE) HSP 1 Score: 548 bits (1413), Expect = 1.200e-171 Identity = 513/1187 (43.22%), Postives = 607/1187 (51.14%), Query Frame = 1
Query: 1 QRPLPEVTVSNTGQLPPEVLTAVRLDHGGADPEEEAG----------------------SVRGSIVGHLTLAVDALHQSETEGXXXXXXXXXXXXXXXETMLVVPHSTSLTPPRPPRPSNKSYASSPAVAGKGRQSGWVSPPSTASPPPEQTGGRRFSSR--GNAAAAGEVGPAGRARQALRLWWPLLAGLAGGAGDPRLDCRAAALSTLQDVLKDFGSAPEFSVRVWPFVLTRVLLPASRHAARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAGWPSSETTLYPASRGVLPLDVGSWVHTTVPQLFRAAVTVVTRNAETAAPLGVPTLMAFFEPHICCRYQSGRQPGTEPSAALPPVASTRIEKKEVG-GEGKAAVSGGGEGNGGDSNE--RPEQLGWGAE----------------VDAAAAAGAAVAEEAGVSGDDLMSRMALESVGLLVEGLVG---QQVSVHVLGGLCDRLVQMLHCCLPESFGPAGRLLRAVSTADPFAVSPEKLTAGASDPSRGLRGLFPRVGKGDGXXXXXXXXXXXXXXXXNSKVDGLDERRATAVVASDDCEVPNPTETSATASATAAAALVEGSPRRDSRTASV--DDEGSPGHTWPVERLSLTKSL-----------------LQDNGEFDGERVTAVLGAALRLQRLLFGLARLHLGQLGEGHTRAVMGGLSSGLRHARAFQAQQGLRASLLSSGLLVARSGPGSQELPHLLEQESEGLCYIFAISFRLLGVLWPRHPSFGSSSGS------------RTLESGQAASSA-----SACSSSFSL--WPERGAFELETAAPQASLHGVVGGQHXXXXXXXXXXXXXXXXLRPPRPGSATTGSGGXAGMAGGRSGRNSGGIGGNVPGGPVLVVDDLLEWSGEGDEGPVGVGGGGWDGAALGREFLRSEGTALLRRYFVADGEIQRGSFEDAMWDSDEEPSFS---PSHVFXXXXXXXXPPPDNAPSPSG----TSRSKRQAFGGSSTHTAHSPLAAGGSGRAQRALQPPPTMVLERGAGTPTSAGLGGGGATARSDRRREALGLAASQEKEIRHLTPAVLLLLRGLLLLKPSEAFAREACWLYPCLVDLVVVRSLEVRAAVRELLSTKMAPLL 3288
+RPLPE T+SNTGQLPPEVL AVR D G + R VGHL L +D+L VP + PP + +P G+ + +G VSP S P G+R S+ G A G V A ++R AL+LWWPLL GLA GAGDPRLDCRAAALSTLQDVLK+FGSA EFS+RVWP++LTR+LLP SR A + XXXXXXXXXXXXXXXX PG PASRGVLPLDVGSWVHTT PQLFRAAV V++ NAE A PLGVPTL+AFFEPH+CCR R + + S +++G G+ V+GG EG+GG+ R EQ G E VAEEAGV GD LMSR+ALES+GLLVEGL G +Q+ VL LCD L++ML CL ESFG AGR+ +P +D G R R XXXXXXXXXXXXXX++KVD L AVV D + +A G R++ + A + +E G P SLT S D+ EFDG R A+L AALRLQRLL+GLARLHLG LGE RA++GGLS G+R+AR FQAQ LR SL ++G+LV RS PG QELPHLLEQESEGL +IFA++FRLL V WPR S S+SG T+ G + SSA + S SL WPE +FELE + XXXXXXXXXXXXXXXX RPPRPG G A G+ GG+ GP+LVVDDLLEWSG+GDEGP G GWDG L EFLR EG +L RYF ADGE+QR S ED MW S ++ + + PS F + SPS +S A GS H S + GSG +R PP P + GLG ++RE L AS E E+RHLTPAVLLLLRGLLLL+P+EAF REA WL P L DLVVVRSLEVRA VRELL +M PL+
Sbjct: 199 KRPLPETTISNTGQLPPEVLGAVRADRGXXXXXXXXXXXXXXXXXXXXXXXXXXRRFRRAARNDAVGHLALDLDSLDPP------------------------VPDEAGGSVADPPAVAAAVAVPTPTATGEDK-AGRVSPSSDMWP--SSAHGKRGSNGVGGVVTAEGGVVAAEQSRLALQLWWPLLTGLARGAGDPRLDCRAAALSTLQDVLKEFGSASEFSLRVWPYLLTRILLPVSRLAEKTTPPLAAPMVPATXXXXXXXXXXXXXXXXRLQAQPATAASSALPSPGSGHLRLGPSSSLSAASGGRVPVARTAAAVAAAPG-----------PASRGVLPLDVGSWVHTTAPQLFRAAVAVISSNAEAAVPLGVPTLLAFFEPHVCCR----RHRHSTSNGRSGRFYSVSSNSRQLGTGD---TVNGGREGSGGEGERVARQEQRHQGQEDAXXXXXXXXXXXXXXXXXXXXXXXXVAEEAGVPGDGLMSRLALESLGLLVEGLAGHQQEQIPAAVLAHLCDSLLRMLRRCLSESFGRAGRVGHDSGGGEP--------QEDPADEDNGARHCAARX-------XXXXXXXXXXXXXXDTKVDSLSGTGRDAVVVGVDASSGGGGDLGPSARG--------GGGRQEKQEARLYPTEEAGDGEAQPARSDSLTLSADGEGHDEPTSGGGGGDGRSDDVEFDGPRAAALLAAALRLQRLLYGLARLHLGGLGEDQARALLGGLSEGVRYARDFQAQHALRTSLFAAGVLVPRSPPGLQELPHLLEQESEGLWFIFAVAFRLLDVRWPR--SSPSASGXXXXXXXXXXXXXETIGGGTSRSSAGDGAFAGGSDEVSLMPWPEHRSFELEAVVVVPN--DXXXXXXXXXXXXXXXXXXXXXXSRPPRPGLPADGDVHRA-----VGGKARGGVHSGSAAGPMLVVDDLLEWSGDGDEGPGSGGAAGWDGTTLALEFLRREGGNILVRYFEADGEVQRASLEDHMWSSADDTAAASAVPSSSFAPPSPSQHRGGFSVESPSRHTVTSSSFSPTASTGSRAHQQASTPRSMGSGGTRR----PPGAAPR----PPAAGGLGP------QHQQREPANLVASTEAEVRHLTPAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELLR-RMTPLI 1293
BLAST of mRNA_M-pyrifera_M_contig10934.1947.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI) HSP 1 Score: 332 bits (852), Expect = 4.810e-91 Identity = 384/1170 (32.82%), Postives = 447/1170 (38.21%), Query Frame = 1
Query: 1 QRPLPEVTVSNTGQLPPEVLTAVRLDHGGADP----------------------------EEEAGSVRGSIVGHLTLAVDALHQSETEGXXXXXXXXXXXXXXXETMLVVPHSTSLTPPRPPRPSNKSYASSPAV------------AGKGRQSGWVSPPSTASPPPEQTGGRRFSSR--GNAAAAGEVGPAGRARQALRLWWPLLAGLAGGAGDPRLDCRAAALSTLQDVLKDFGSAPEFSVRVWPFVLTRVLLPASRHAARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAGWPSSETTLYPASRGVLPLDVGSWVHTTVPQLFRAAVTVVTRNAETAAPLGVPTLMAFFEPHICCRYQSGRQPGTEPSAALPPVASTRIEKKEVGGEGKAAVSGGGEGNG--GDSNERPEQLGWGAEVDAAAAAGA-----------------AVAEEAGVSGDDLMSRMALESVGLLVEGLVGQQ---VSVHVLGGLCDRLVQMLHCCLPESFGPAGRLLRAVSTADPFAVSPEKLTAGASDPSRGLRGLFPRVGKGDGXXXXXXXXXXXXXXXXNSKVDGLDERRATAVVASDDCEVPNPTETSATASATAAAALVEGSPRRDSRTASVDDEGSPGHTWPVERLSLTKSLLQDNGEFDGERVTAVLGAALRLQRLLFGLARLHLGQLGEGHTRAVMGGLSSGLRHARAFQAQQGLRASLLSSGLLVARSGPGSQELPHLLEQESEGLCYIFAISFRLLGVLWPRHPSFGSSSGSRTLESGQAASSASACSSSFSLWPERGAFELETAAPQASLHGVVGGQHXXXXXXXXXXXXXXXXLRPPRPGSATTGSGGXAGMAGGRSGRNSGGIGGNVPGGPVLVVDDLLEWSGEGDEGPVGVGGGGWDGAALGREFLRSEGTALLRRYFVADGEIQRGSFEDAMWDSDEEPSFSPSHVFXXXXXXXXPPPD------NAPSPSG----TSRSKRQAFGGSSTHTAHSPLAAGGSGRAQRALQPPPTMVLERGAGTPTSAGLGGGGATARSDRRREALGLAASQEKEIRHLTPAVLLLLRGLLLLKPSEAFAREACWLYPCLVDLVVVRSLEVRAAVRELLSTKMAPLL 3288
QRPLPE T+SNTGQLPPEVL AVR D+GG + R VGHLTL +D SL PP PP + + A PA G+ R +G VSP S P + G+R S+ G AAA G VG A ++R AL+LWWPLL GLA GAGDPRLDCRAAALSTLQDVLK+FGSAPEFS+RVWP++LTR+LLP SR A + XXXXXXXXXXXXXXXXXXX PG PASRGVLPLDV SWVHTT PQLFRAAV VV+ NAE A PLGVPTL+AFFEPH+CCR R + + + S +++G AV+GG EG+G G+S R EQ + DA AVAEEAGV GD LMSR+ALES+GLLVEGL G Q + VL +CD L++ML CLPESFG AG G P DG+ +HG VGG + GG+ GP+LVVDDLLEWSG+GD+GP G G GWDG AL EFLR EG LL RYFVADGE+QR S ED MW S ++ XX P P +A SPS +S A GS H S + GSG A+R L P + P + GLG ++RE + L AS E E+RHLT AVLLLLRGLLLL+P+EAF REA WL P L DLVVVRSLEVRA VRELL T+MAPL+
Sbjct: 1536 QRPLPEATISNTGQLPPEVLGAVRADYGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSRRAARNDAVGHLTLDLD----------------------------------SLDPPVPPDEAGGAVADPPAAXXXXVAVPTPTATGEDR-AGRVSPSSDMWPSSAR--GKRGSNGVGGVAAAEGGVGAAEQSRLALQLWWPLLTGLARGAGDPRLDCRAAALSTLQDVLKEFGSAPEFSLRVWPYLLTRILLPVSRLAEKTTPPLAAPTAXXXXXXXXXXXXXXXXXXXRRQAQPATATPSALPSPGSGHLRLGPSSSLSAASGGRVPVARAAAATAAAPG-----------PASRGVLPLDVDSWVHTTAPQLFRAAVAVVSSNAEAAVPLGVPTLLAFFEPHVCCR----RHRHSTSNGSSSRFCSVSSNSRQLGTG--VAVNGGREGSGDEGESLARQEQRHQ-VQEDAXXXXXXXXXXXXXXXXXXXXXXXAVAEEAGVPGDGLMSRLALESLGLLVEGLAGHQQEKLPAAVLAHVCDSLLRMLRRCLPESFGRAGXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------XXXXGLPA---------------------DGD--------------------------------------------------------------------------------------------------------------------------------------------------------VHGAVGG-------------------------------------------KARGGVHSGSAAGPMLVVDDLLEWSGDGDDGPGGGGAAGWDGTALALEFLRREGGNLLVRYFVADGEVQRASLEDHMWSSADDXXXXXXXXXXXSSSFAPPSPSQHRGGFSAESPSRHTVTSSSFSPTASTGSRAHQQASTPRSVGSGGARRPLGAAPRL--------PAAGGLGP------QHQQREPVNLVASAEAEVRHLTSAVLLLLRGLLLLQPAEAFDREAGWLCPRLADLVVVRSLEVRAVVRELL-TRMAPLI 2330
BLAST of mRNA_M-pyrifera_M_contig10934.1947.1 vs. uniprot
Match: A0A835ZB96_9STRA (SEC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB96_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 5.280e-9 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 445 PAGRARQALRLWWPLLAGLAGGAGDPRLDCRAAALSTLQDVLKDFGSAPEFSVRVWPFVLTRVLLPASRHAA 660
P R L LWWPLL GL+ GD RLD R+AA+STL+D+L+D+G+ PEF V W V VL RHAA
Sbjct: 740 PGASRRARLALWWPLLTGLSECQGDSRLDQRSAAISTLRDLLRDYGALPEFDV-AWGAVFRCVLFAPMRHAA 810 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10934.1947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10934.1947.1 >prot_M-pyrifera_M_contig10934.1947.1 ID=prot_M-pyrifera_M_contig10934.1947.1|Name=mRNA_M-pyrifera_M_contig10934.1947.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1096bp QRPLPEVTVSNTGQLPPEVLTAVRLDHGGADPEEEAGSVRGSIVGHLTLAback to top mRNA from alignment at M-pyrifera_M_contig10934:3513..9996- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10934.1947.1 ID=mRNA_M-pyrifera_M_contig10934.1947.1|Name=mRNA_M-pyrifera_M_contig10934.1947.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6484bp|location=Sequence derived from alignment at M-pyrifera_M_contig10934:3513..9996- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10934:3513..9996- >mRNA_M-pyrifera_M_contig10934.1947.1 ID=mRNA_M-pyrifera_M_contig10934.1947.1|Name=mRNA_M-pyrifera_M_contig10934.1947.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=6576bp|location=Sequence derived from alignment at M-pyrifera_M_contig10934:3513..9996- (Macrocystis pyrifera P11B4 male)back to top |