mRNA_M-pyrifera_M_contig108998.1885.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A2E7K7Q2_9PLAN (Probable pectate lyase C n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K7Q2_9PLAN) HSP 1 Score: 324 bits (830), Expect = 2.410e-99 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1 Query: 43 ISSSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 ISSSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN Sbjct: 5093 ISSSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 5260
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A517WHU1_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WHU1_9PLAN) HSP 1 Score: 318 bits (815), Expect = 2.510e-97 Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 1 Query: 46 SSSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 S+SAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFG+GGDSSVVDEQTNIQISVVKDRT VSSN Sbjct: 5091 SNSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGTGGDSSVVDEQTNIQISVVKDRTVVSSN 5257
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A6I6AI90_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AI90_9PLAN) HSP 1 Score: 315 bits (808), Expect = 2.150e-96 Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 1 Query: 46 SSSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 S+SAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGE RPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRT VSSN Sbjct: 1778 SNSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGELRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTVVSSN 1944
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A518AB66_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AB66_9PLAN) HSP 1 Score: 267 bits (683), Expect = 1.430e-79 Identity = 137/162 (84.57%), Postives = 146/162 (90.12%), Query Frame = 1 Query: 58 GGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSS 543 G FVTL NTIVAGNS AQGN DLGG YD+A+SFNNLVG+I ATGLTD +NGNIIGSL SPVDP LGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRG RPVDGDND+ AITDIGAVEL+ PP APL+G+GGDS+VVDEQTNIQISVVKDRT VSS Sbjct: 4973 GAFVTLFNTIVAGNSAAQGNDDLGGDYDTASSFNNLVGNIDTATGLTDGLNGNIIGSLTSPVDPNLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGHARPVDGDNDATAITDIGAVELQSPPPAPLYGTGGDSTVVDEQTNIQISVVKDRTVVSS 5134
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A3D3QZA8_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3QZA8_9PLAN) HSP 1 Score: 221 bits (562), Expect = 2.230e-70 Identity = 114/151 (75.50%), Postives = 123/151 (81.46%), Query Frame = 1 Query: 94 GNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 GN G GNPDLGG Y + TSFNNLVGDIG ATGLTD VNGNIIG+L +P+DPKLGILLDNGGPT+TH+LLFGS AIDAG N AP VDQRG+ RPVDGD A DIGAVEL PP APLFG+GGDSSV DE TNIQISVVK +T VSSN Sbjct: 1 GNIGFLGNPDLGGDYVTLTSFNNLVGDIGAATGLTDGVNGNIIGTLAAPIDPKLGILLDNGGPTKTHSLLFGSQAIDAGLNGSAPPVDQRGDVRPVDGDLSGTATVDIGAVELDGPPPAPLFGTGGDSSVADENTNIQISVVKQKTVVSSN 151
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A518FU83_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FU83_9PLAN) HSP 1 Score: 239 bits (611), Expect = 6.900e-70 Identity = 129/168 (76.79%), Postives = 138/168 (82.14%), Query Frame = 1 Query: 58 GGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAP------LVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSS 543 GG TL NTIVA N+GA GNPDL G +D+ATSFNNL+ DIG ATGLTD VNGNIIGSL + VDPKLGILLDNGGPTRTHTLL GS AIDAGRNN P LVDQRGE RPVDG+NDS TDIGAVELK P APL+G+GGDS+VVDEQTNIQISVVKDRT VSS Sbjct: 5092 GGLATLFNTIVAYNNGALGNPDLEGAFDTATSFNNLIRDIGNATGLTDGVNGNIIGSLGAEVDPKLGILLDNGGPTRTHTLLAGSPAIDAGRNNYFPVLTQNLLVDQRGEVRPVDGNNDSTPTTDIGAVELKQAPPAPLYGTGGDSTVVDEQTNIQISVVKDRTVVSS 5259
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A517XGD9_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517XGD9_9PLAN) HSP 1 Score: 237 bits (604), Expect = 6.030e-69 Identity = 120/160 (75.00%), Postives = 133/160 (83.12%), Query Frame = 1 Query: 67 VTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 VT+ NTIVAGN G GNPDLGG Y + TSFNNL+GDIG ATGLTD VNGNIIG+L +P+DPKLGILLDNGGPT+TH+LLFGS AIDAG N APLVDQRG+ RPVDGD A DIGAVE++ PP APLFG+GGDSSV DE TNIQISVVK +T VSSN Sbjct: 5108 VTMTNTIVAGNIGFLGNPDLGGDYVTLTSFNNLIGDIGAATGLTDGVNGNIIGTLAAPIDPKLGILLDNGGPTKTHSLLFGSQAIDAGLNGSAPLVDQRGDVRPVDGDLSGTATADIGAVEVQSPPPAPLFGTGGDSSVADENTNIQISVVKQKTVVSSN 5267
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A6C557_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia maris TaxID=122 RepID=A6C557_9PLAN) HSP 1 Score: 237 bits (604), Expect = 6.030e-69 Identity = 120/160 (75.00%), Postives = 133/160 (83.12%), Query Frame = 1 Query: 67 VTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 VT+ NTIVAGN G GNPDLGG Y + TSFNNL+GDIG ATGLTD VNGNIIG+L +P+DPKLGILLDNGGPT+TH+LLFGS AIDAG N APLVDQRG+ RPVDGD A DIGAVE++ PP APLFG+GGDSSV DE TNIQISVVK +T VSSN Sbjct: 5122 VTMTNTIVAGNIGFLGNPDLGGDYVTLTSFNNLIGDIGAATGLTDGVNGNIIGTLAAPIDPKLGILLDNGGPTKTHSLLFGSQAIDAGLNGSAPLVDQRGDVRPVDGDLSGTATADIGAVEVQSPPPAPLFGTGGDSSVADENTNIQISVVKQKTVVSSN 5281
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A3C0ALG8_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0ALG8_9PLAN) HSP 1 Score: 235 bits (599), Expect = 2.710e-68 Identity = 121/164 (73.78%), Postives = 131/164 (79.88%), Query Frame = 1 Query: 55 AGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 A VTL NTIVAGN G GNPDLGG Y + TSFNNL+GDIG ATGLT+ NGNIIG+L +PVDPKLGILLDNGGPTRTH+LLFGS AIDAG N AP VDQRGE RP DGD A DIGA+EL+ PP APLFGSGGDSS+ DE TNIQISVVK +T VSSN Sbjct: 1080 ASATVTLTNTIVAGNIGFLGNPDLGGDYVTLTSFNNLIGDIGAATGLTNGENGNIIGTLAAPVDPKLGILLDNGGPTRTHSLLFGSQAIDAGLNGSAPTVDQRGEARPTDGDLSGTATVDIGAIELQSPPPAPLFGSGGDSSIADENTNIQISVVKQKTAVSSN 1243
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Match: A0A2E2C473_9PLAN (Probable pectate lyase C n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C473_9PLAN) HSP 1 Score: 235 bits (599), Expect = 2.840e-68 Identity = 121/164 (73.78%), Postives = 131/164 (79.88%), Query Frame = 1 Query: 55 AGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATSFNNLVGDIGGATGLTDAVNGNIIGSLLSPVDPKLGILLDNGGPTRTHTLLFGSAAIDAGRNNGAPLVDQRGEPRPVDGDNDSVAITDIGAVELKDPPAAPLFGSGGDSSVVDEQTNIQISVVKDRTTVSSN 546 A VTL NTIVAGN G GNPDLGG Y + TSFNNL+GDIG ATGLT+ NGNIIG+L +PVDPKLGILLDNGGPTRTH+LLFGS AIDAG N AP VDQRGE RP DGD A DIGA+EL+ PP APLFGSGGDSS+ DE TNIQISVVK +T VSSN Sbjct: 5136 ASATVTLTNTIVAGNIGFLGNPDLGGDYVTLTSFNNLIGDIGAATGLTNGENGNIIGTLAAPVDPKLGILLDNGGPTRTHSLLFGSQAIDAGLNGSAPTVDQRGEARPADGDLSGTATVDIGAIELQSPPPAPLFGSGGDSSIADENTNIQISVVKQKTAVSSN 5299 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108998.1885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108998.1885.1 >prot_M-pyrifera_M_contig108998.1885.1 ID=prot_M-pyrifera_M_contig108998.1885.1|Name=mRNA_M-pyrifera_M_contig108998.1885.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp NTLTDNTADQTGGGISSSAGGFVTLVNTIVAGNSGAQGNPDLGGVYDSATback to top mRNA from alignment at M-pyrifera_M_contig108998:62..607- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108998.1885.1 ID=mRNA_M-pyrifera_M_contig108998.1885.1|Name=mRNA_M-pyrifera_M_contig108998.1885.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig108998:62..607- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108998:62..607- >mRNA_M-pyrifera_M_contig108998.1885.1 ID=mRNA_M-pyrifera_M_contig108998.1885.1|Name=mRNA_M-pyrifera_M_contig108998.1885.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig108998:62..607- (Macrocystis pyrifera P11B4 male)back to top |