mRNA_M-pyrifera_M_contig108957.1875.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A7V3LGV5_9ACTN (Hsp20/alpha crystallin family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V3LGV5_9ACTN) HSP 1 Score: 103 bits (258), Expect = 5.840e-26 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 46 ERSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNI 333 ER S+ P++D+ ETDD ++ ELAGM P DIN+EV D +L VSGER E E + KY R+ER YG+FSR +ALP VD+ + A +NG+L++ I Sbjct: 32 ERQSWTPSIDVIETDDSIKLKAELAGMDPADINIEVQDNVLTVSGERRFEEEVKEDKYYRIERRYGAFSRSIALPQTVDEEKIEAKYENGILEITI 127
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A7X7SNR4_9ACTN (Hsp20/alpha crystallin family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X7SNR4_9ACTN) HSP 1 Score: 103 bits (257), Expect = 8.490e-26 Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 13 RLIDEAFERPIERSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNIVTP 342 RL+ P+ER S+ P++D+ ET DG + +LAGMKPEDI++EV D +L +SGER E + + KY R+ER YGSFSR +ALP GV + A+ +NGVL ++V P Sbjct: 21 RLMGRFGTEPVERQSWIPSIDVVETKDGIKFQADLAGMKPEDIHLEVEDNVLTISGERRFEEKVEEDKYYRIERRYGSFSRSIALPQGVRTDSIQANYENGVL--DVVVP 128
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A7X7GGG3_9ACTN (Hsp20/alpha crystallin family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X7GGG3_9ACTN) HSP 1 Score: 103 bits (256), Expect = 1.200e-25 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 13 RLIDEAFERPIERSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKL 327 RL+ P+ER S+ P++D+ ET +G + ELAGM+PEDI++EV D +L +SGER E E + KY R+ER YGSFSR +ALP GV + A+ +NGVL++ Sbjct: 21 RLMGRFGTEPVERQSWIPSIDVVETKEGIKFQAELAGMRPEDIHLEVEDNVLTISGERRFEHEVEEDKYYRIERRYGSFSRSIALPQGVLSENIEANYENGVLEV 125
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: UPI000CD9EEDF (Hsp20/alpha crystallin family protein n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD9EEDF) HSP 1 Score: 101 bits (251), Expect = 4.320e-25 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 16 LIDEAFERPIE--RSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNI 333 ++DE F + + +F P VDI ET++ F++ V L G+K +DIN+++ +G L +SGER E EET Y RVE +YGSFSR LPD +D+ + A DNGVL +NI Sbjct: 21 ILDEFFNDSLNYRKDTFMPTVDISETENDFQVEVSLPGLKKDDINIDLENGRLTISGERKLENEETGKNYHRVESSYGSFSRSFQLPDSIDEESIEAKYDNGVLNINI 128
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: UPI00036239FC (Hsp20/alpha crystallin family protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00036239FC) HSP 1 Score: 98.2 bits (243), Expect = 7.000e-24 Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 16 LIDEAFERPI--ERSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNI 333 ++DE F I ++ SF P+VDI ET++ FE+SV L GMK EDI+V++ DG L +SGER E+E+ Y R+E +G+FSR LPD +D+S + A +NGVL + I Sbjct: 21 ILDEFFNDSIRYKKDSFVPSVDISETENSFEISVALPGMKKEDISVDLDDGRLTISGERKFEKEDEGKNYHRLESGFGTFSRSFQLPDNIDESSIEAKYENGVLDITI 128
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A2D9FRB2_9BACT (Heat-shock protein Hsp20 n=3 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FRB2_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 1.400e-23 Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 16 LIDEAFERPIE--RSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNI 333 ++DE F ++ + SF P+VDI ETD+ FE+ V L GMK +DIN+++ +G L +SGER E EE+ Y R+E +GSFSR LPD +D+ ++A +NGVL + I Sbjct: 21 ILDEFFNDSLKYRKDSFIPSVDISETDNSFEIEVALPGMKKDDINIDLDNGRLTISGERTFENEESNKNYHRLESGFGSFSRSFQLPDSIDEESINAKYENGVLDITI 128
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A3D0I3J7_9DELT (SHSP domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D0I3J7_9DELT) HSP 1 Score: 97.1 bits (240), Expect = 3.460e-23 Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 7 LFRLIDEAF-ERPIERSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSR-VERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNI 333 L RL++E F ERP R PA+D+HE D+ + ++VEL G++ ED++VE+ DG+L V GE+ SEREE +G+ +R VER+YGSFSR LP + AS +G+L L I Sbjct: 39 LSRLMEEVFGERPFARGELVPALDLHEADNEYVVTVELPGVRKEDVSVEMTDGVLTVRGEKKSEREEKKGERTRWVERSYGSFSRSFTLPANATPDRIDASYKDGILTLRI 149
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A537ZYQ9_9ACTN (Hsp20/alpha crystallin family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZYQ9_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 5.420e-23 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 64 PAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNIVTP 342 PA+D+ ETDD + +L G+ +D+N+E+ DG+L VSGER +E EE + Y RVER YG FSR ++LP G+D V A D GVL++ I P Sbjct: 2 PAMDLVETDDHLVLRADLPGLDKDDVNIEIKDGVLTVSGERQAEHEERKDGYHRVERAYGGFSRSLSLPQGIDAEQVQADFDKGVLEVRIPKP 94
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A7C3E2K2_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A7C3E2K2_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 6.110e-23 Identity = 46/105 (43.81%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 19 IDEAFERPIERSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNI 333 ++ F++P ++PAVDI E ++ ++ +L G+K +D+++++ DG+L +SGER E EE +G Y R+ER YGSF R +LPD VD VSA DNGVLK+++ Sbjct: 25 LNRFFDQPASARPWSPAVDIVEDENELTLTADLPGIKMDDLDIKIEDGVLTLSGERKFENEEKKGGYHRIERAYGSFRRAFSLPDTVDAEKVSARFDNGVLKVSL 129
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Match: A0A1M4V364_9BACT (Heat shock protein Hsp20 n=1 Tax=Aliifodinibius roseus TaxID=1194090 RepID=A0A1M4V364_9BACT) HSP 1 Score: 95.5 bits (236), Expect = 7.990e-23 Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 16 LIDEAFERPIE--RSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEVHDGMLRVSGERHSEREETQGKYSRVERTYGSFSRQMALPDGVDDSMVSASMDNGVLKLNI 333 ++DE F + R++F P++DI ETD+ F +S EL GMK EDIN+ + + L +SGER ++EE K+ RVE YGSF+R LPD VD+ + AS ++G+L ++I Sbjct: 21 IMDEFFNEAVSARRNNFTPSIDISETDNQFLISAELPGMKKEDININLENSRLTISGERSFKKEEEGKKFHRVETRYGSFNRSFQLPDNVDEESIEASYEDGLLNISI 128 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108957.1875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108957.1875.1 >prot_M-pyrifera_M_contig108957.1875.1 ID=prot_M-pyrifera_M_contig108957.1875.1|Name=mRNA_M-pyrifera_M_contig108957.1875.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp QSLFRLIDEAFERPIERSSFNPAVDIHETDDGFEMSVELAGMKPEDINVEback to top mRNA from alignment at M-pyrifera_M_contig108957:11..361+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108957.1875.1 ID=mRNA_M-pyrifera_M_contig108957.1875.1|Name=mRNA_M-pyrifera_M_contig108957.1875.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=351bp|location=Sequence derived from alignment at M-pyrifera_M_contig108957:11..361+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108957:11..361+ >mRNA_M-pyrifera_M_contig108957.1875.1 ID=mRNA_M-pyrifera_M_contig108957.1875.1|Name=mRNA_M-pyrifera_M_contig108957.1875.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig108957:11..361+ (Macrocystis pyrifera P11B4 male)back to top |