mRNA_M-pyrifera_M_contig1089.1868.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: D7G2D9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2D9_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.270e-68 Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 1 Query: 10 GVKWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTLAAGETVQV 357 G +WRYRVVCRDGAFVRHGIELTS FLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIV+LL+PL YRVVLPDGAVVRRTVELASSQVKT+AAGE VQV Sbjct: 114 GARWRYRVVCRDGAFVRHGIELTSPFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVKLLQPLQYRVVLPDGAVVRRTVELASSQVKTIAAGELVQV 229
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: A0A8J2X1W1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1W1_9STRA) HSP 1 Score: 140 bits (353), Expect = 5.340e-38 Identity = 71/118 (60.17%), Postives = 85/118 (72.03%), Query Frame = 1 Query: 4 DTGVKWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTLAAGETVQV 357 D G WRY VVCRDGA+VR G+EL S F LP +V EV ERR+N+ GL RL+ +GWISE LNPLSGQRGPV E + + PL +RVVL DGAVVR TVEL+S+ V + G TV+V Sbjct: 111 DVGHAWRYVVVCRDGAYVRRGLELASTHAFTLPKDAVFEVRERRVNEQGLARLRTDDGWISEDLNPLSGQRGPVAEPLPVAAPLTFRVVLRDGAVVRETVELSSAIVSVIPCGRTVEV 228
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: K8YNW0_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNW0_NANGC) HSP 1 Score: 131 bits (330), Expect = 2.420e-36 Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 1 ADTGVKWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTLAAGETVQV 357 A T + YRVVC DGA+VR G+EL+S L+ + S +EVLER +N+ GL RL+ +GWISE+LNPLSGQRGP+VE+V L PL +R+ PDGA+VR +EL+S V T+ AG+ + V Sbjct: 25 AFTQAAFHYRVVCEDGAYVRAGLELSSRHLYTIGSQSTIEVLERCVNNQGLARLRTRDGWISEMLNPLSGQRGPIVELVPLQHPLKFRITFPDGALVRSGIELSSGVVGTIPAGQEIVV 143
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: W7TQ97_9STRA (E3 ubiquitin-protein ligase mdm2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ97_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.100e-34 Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 1 ADTGVKWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTLAAGETVQV 357 A T + YRVVC DGA+VR G+EL+S L+ + S +EVLER +N+ GL RL+ +GWISE+LNPLSGQRGP+VE+V L PL +R+ PDGA+VR +EL+S V T+ AG+ + V Sbjct: 15 AFTQAAFHYRVVCEDGAYVRAGLELSSRHLYTIGSQSTIEVLERCVNNQGLARLRTRDGWISEMLNPLSGQRGPIVELVPLQHPLKFRITFPDGALVRSGIELSSGVVGTIPAGQEIVV 133
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: A0A7S2S0R0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0R0_9STRA) HSP 1 Score: 129 bits (323), Expect = 4.760e-33 Identity = 60/116 (51.72%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 16 KWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIAE--GWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTLAAGETVQV 357 +W YRVVC DGA VR G+EL+S + + H+++E+ ER+IN+ GL RL+ A+ GWISE LNPLSG RGPVV ++++ RPL + V+LP+GAVVRRT+EL+S + + GE + + Sbjct: 140 RWLYRVVCADGAVVRSGLELSSDHKYTVRQHAIIEISERKINEQGLARLRTADERGWISEQLNPLSGHRGPVVSLLKMPRPLRFNVILPEGAVVRRTMELSSMITRVVPTGEVISI 255
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: A0A836CML9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML9_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.600e-32 Identity = 64/119 (53.78%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 1 ADTGVKWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTLAAGETVQV 357 A +WRY+VVCR GA VR G L S+ + LP+ S++EV ER IN+ G+ RL+ A GWISE LNPLSGQRG +VE++ L+ PL + VV DG VV R VELAS+ ++ L AG V V Sbjct: 114 ATVAARWRYKVVCRLGALVREGPSLASSAVEELPYLSIIEVSERLINEQGIARLRTASGWISEALNPLSGQRGAIVELIPLIAPLRFVVVQGDGVVVTRGVELASTFIRRLEAGALVDV 232
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: A0A7S2V8C6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8C6_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.930e-31 Identity = 60/102 (58.82%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 10 GVKWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIAEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELAS 315 G KWRYRVVC GA VR G+ELTSA+ + HS+ E ERR+N GL RL++ +GW+SE LNPLSGQRG V ++V L PL Y VV P GAVVR + EL S Sbjct: 98 GAKWRYRVVCPTGAVVREGLELTSAYCRTIEVHSIFEASERRVNRQGLARLRLEDGWVSEALNPLSGQRGLVAQLVPLPSPLRYEVVHPSGAVVRSSPELTS 199
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: A0A7S3P682_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P682_9STRA) HSP 1 Score: 112 bits (280), Expect = 7.270e-27 Identity = 55/113 (48.67%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 19 WRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKIA--------------EGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELAS 315 W ++V C GA+VR G+EL + + LP+ +VV+VL +R+N AGLPRL+IA +GW S LNPLSGQRG +++ + L RP++YR+VLP GAV+R+ VELAS Sbjct: 96 WYWKVTCPAGAYVREGLELATRHVGTLPYGAVVQVLRQRVNQAGLPRLQIAAHVYDPNTDSYQKLQGWCSTALNPLSGQRGAILQPLSLPRPMVYRIVLPQGAVIRQDVELAS 208
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: A0A448Z6X6_9STRA (RING-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6X6_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.340e-23 Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 19 WRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLK----------------IAEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTLAAGETVQV 357 W +RV C GAFVR G++L + + LP+ S+V V R IN+ GL RL+ + GW SE+LNPLSGQRG V + + P +YRV LP GAVVRR +EL S Q++ L G T++V Sbjct: 420 WIWRVTCPSGAFVREGLDLHTRHIETLPYGSLVRVTRRCINNQGLSRLRTSGYLSLKTHEGNSRVLVTGWCSELLNPLSGQRGIVAQPLPFPVPAIYRVTLPMGAVVRRDIELMSPQIEILPFGSTIKV 548
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Match: A0A7S2KL76_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KL76_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.710e-22 Identity = 54/121 (44.63%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 19 WRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGLPRLKI----------------AEGWISEVLNPLSGQRGPVVEIVRLLRPLLYRVVLPDGAVVRRTVELASSQVKTL 333 W +RV R GA+VR G+EL S + LP+ S V V ++ IN GL RLKI EGWISE LNPLSGQ G +V+ + RPL ++V+L +GAV+R VEL+S +++T+ Sbjct: 297 WNWRVTYRSGAYVRDGLELNSKQVAVLPFGSFVSVKQKTINAMGLSRLKIKAKVSKTSHGSEDSEVVEGWISEKLNPLSGQSGAIVKSLPFHRPLAFKVILAEGAVIRNGVELSSREIRTV 417 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1089.1868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1089.1868.1 >prot_M-pyrifera_M_contig1089.1868.1 ID=prot_M-pyrifera_M_contig1089.1868.1|Name=mRNA_M-pyrifera_M_contig1089.1868.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp ADTGVKWRYRVVCRDGAFVRHGIELTSAFLFNLPWHSVVEVLERRINDAGback to top mRNA from alignment at M-pyrifera_M_contig1089:25733..26627- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1089.1868.1 ID=mRNA_M-pyrifera_M_contig1089.1868.1|Name=mRNA_M-pyrifera_M_contig1089.1868.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=895bp|location=Sequence derived from alignment at M-pyrifera_M_contig1089:25733..26627- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1089:25733..26627- >mRNA_M-pyrifera_M_contig1089.1868.1 ID=mRNA_M-pyrifera_M_contig1089.1868.1|Name=mRNA_M-pyrifera_M_contig1089.1868.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig1089:25733..26627- (Macrocystis pyrifera P11B4 male)back to top |