mRNA_M-pyrifera_M_contig108865.1860.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A2D8LSV1_9ACTN (UDP-glucose 6-dehydrogenase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LSV1_9ACTN) HSP 1 Score: 349 bits (895), Expect = 1.770e-117 Identity = 173/203 (85.22%), Postives = 189/203 (93.10%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609 ST LVEQA+ RSDIPVVSNPEFLREG+AVDDFL+PDRVVIG+DD+AAA VA+LY+ AP+MVTDPASAETCKYAANAFLA KLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSC PKDS AIISIAEDAGYDFALMRGV++ N+EQFDRIVRKV SVT+LDGAT+ +LG+AFKAGTDDTRESPA+ V Sbjct: 128 STLLVEQALGRSDIPVVSNPEFLREGSAVDDFLHPDRVVIGSDDEAAASHVASLYVDCGAPIMVTDPASAETCKYAANAFLAAKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCLPKDSNAIISIAEDAGYDFALMRGVIQANDEQFDRIVRKVESVTSLDGATVGVLGIAFKAGTDDTRESPAIEV 330
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A358A1V4_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A1V4_9ACTN) HSP 1 Score: 343 bits (879), Expect = 4.710e-115 Identity = 174/203 (85.71%), Postives = 185/203 (91.13%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609 ST LVEQA+ RSDIPVVSNPEFLREG+AVDDFL+PDRVVIG+DDQAAA RVA LY APVM TDPASAETCKYAANAFLATKLSF NAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSC PKDS AIISIA+DAGYDFALMRGVVE N+EQFDRIVRKV SV L GAT+ +LG+AFKAGTDDTRESPA++V Sbjct: 128 STLLVEQALGRSDIPVVSNPEFLREGSAVDDFLHPDRVVIGSDDQAAADRVALLYADCGAPVMRTDPASAETCKYAANAFLATKLSFANAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCLPKDSTAIISIADDAGYDFALMRGVVEANQEQFDRIVRKVESVVPLKGATVGVLGIAFKAGTDDTRESPAIAV 330
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A3M2GIR1_ACTSX (UDP-glucose 6-dehydrogenase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GIR1_ACTSX) HSP 1 Score: 338 bits (866), Expect = 6.630e-113 Identity = 165/203 (81.28%), Postives = 184/203 (90.64%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609 STRLVEQA+ R DIPVVSNPEFLREGTA+ DFL PDRVVIGA+DQAAAGRVA+LYLGVRAP+MVTDPASAET KYAANAFLATKLSF NA+AAVCEAVGADVNDVLL MGYDHRIGHEF+RPGPGWGGSC PKD+RA+I IAEDAGYDF+L+RGV+ VNEEQ DR+V K+ LDGA +A+ GLAFKAGTDDTR+SPAL++ Sbjct: 141 STRLVEQALARGDIPVVSNPEFLREGTAITDFLEPDRVVIGAEDQAAAGRVASLYLGVRAPIMVTDPASAETTKYAANAFLATKLSFVNAVAAVCEAVGADVNDVLLAMGYDHRIGHEFMRPGPGWGGSCLPKDTRALIRIAEDAGYDFSLLRGVIAVNEEQLDRVVAKIADGVELDGARVAVWGLAFKAGTDDTRDSPALAI 343
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A7Y2D7Y2_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D7Y2_9ACTN) HSP 1 Score: 318 bits (814), Expect = 3.980e-105 Identity = 155/205 (75.61%), Postives = 182/205 (88.78%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609 STRLVEQA+ RSD+ VVSNPEFLREG+AVDDFLNPDRVVIGA++Q AA RVA+L+LG RAP++VTDPASAET KYA+NAFLATKLSF NA+AAVCEAVGADVNDV+LG+GYD RIGH+FLRPGPGWGGSCFPKD+RA+ISIAED GYDF L+RGV++VN+EQFDR+ +KV ++ G ++ +LGL FKAGTDD RESPAL V Sbjct: 128 STRLVEQALGRSDVTVVSNPEFLREGSAVDDFLNPDRVVIGAENQTAATRVASLFLGTRAPILVTDPASAETTKYASNAFLATKLSFVNAVAAVCEAVGADVNDVMLGIGYDQRIGHQFLRPGPGWGGSCFPKDTRAMISIAEDGGYDFTLLRGVIDVNDEQFDRVTQKVIDAAGGSISGVSVGVLGLTFKAGTDDVRESPALEV 332
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A6J7QRF8_9ZZZZ (UDP-glucose 6-dehydrogenase n=4 Tax=root TaxID=1 RepID=A0A6J7QRF8_9ZZZZ) HSP 1 Score: 311 bits (797), Expect = 1.310e-102 Identity = 155/205 (75.61%), Postives = 179/205 (87.32%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609 STRLVEQA+ RSD+ VVSNPEFLREG+AV DFL+PDRVVIGADDQAAA RVA+LYLGVRAP+M+TD SAET KYA+NAFLATKLSF NA+AAVCEAV ADVNDV+LG+GYD RIGHEFL+PGPGWGGSCFPKD+RA++ IAEDAGYDFAL+RGV+ VN+EQF R+V+KV +L+G I LG+ FKAGTDD RESPAL + Sbjct: 128 STRLVEQALGRSDVFVVSNPEFLREGSAVSDFLHPDRVVIGADDQAAASRVASLYLGVRAPIMITDAPSAETIKYASNAFLATKLSFANAVAAVCEAVDADVNDVMLGIGYDRRIGHEFLKPGPGWGGSCFPKDTRAMLRIAEDAGYDFALLRGVIAVNDEQFARVVQKVVDAAGGSLEGVRIGALGITFKAGTDDIRESPALEI 332
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A538DD53_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DD53_9ACTN) HSP 1 Score: 311 bits (796), Expect = 1.800e-102 Identity = 154/205 (75.12%), Postives = 177/205 (86.34%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609 STRLVE A+ RSDI VVSNPEFLREG+AV DF+NPDRVVIGA+DQ+AA RVA+LYLGVRAP+M+TD A+AET KYA+NAFLATKLSF NA+AAVCE VGADVNDVLLGMGYD RIGHEFLRPGPGWGGSCFPKD+RA+I IAEDAGYDF+L+RGV+ VN+EQF+R+ KV +L+G + LGL FKAGTDD R SPAL + Sbjct: 127 STRLVEHALARSDIGVVSNPEFLREGSAVADFMNPDRVVIGAEDQSAATRVASLYLGVRAPIMITDAATAETIKYASNAFLATKLSFVNAVAAVCEVVGADVNDVLLGMGYDRRIGHEFLRPGPGWGGSCFPKDTRAMIRIAEDAGYDFSLLRGVIAVNDEQFERVTEKVARCAGGSLEGVRVGALGLTFKAGTDDLRASPALEI 331
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A6B1AVB2_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AVB2_9ACTN) HSP 1 Score: 305 bits (781), Expect = 3.460e-100 Identity = 155/203 (76.35%), Postives = 172/203 (84.73%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609 ST LVE+AM R DI VVSNPEFLREGTAV DFL+PDRVVIGADD A A RVA L+ + APVM+TDPASAET KYAANAFLATKLSF N IAAVCEAVGADV DVL MG D RIG EFL PGPGWGGSCFPKD+RAIIS+AEDAGYDF+LMRGV++ N+EQF R+V K S +L+G+T+ALLGLAFKAGTDDTR SPAL + Sbjct: 130 STLLVEEAMNRPDIAVVSNPEFLREGTAVTDFLSPDRVVIGADDPAVADRVADLHRSIGAPVMITDPASAETIKYAANAFLATKLSFVNTIAAVCEAVGADVGDVLAAMGLDKRIGGEFLVPGPGWGGSCFPKDTRAIISMAEDAGYDFSLMRGVLKANDEQFKRVVNKAASAVSLNGSTVALLGLAFKAGTDDTRNSPALEI 332
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A7X7D2C5_9ACTN (UDP-glucose 6-dehydrogenase (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D2C5_9ACTN) HSP 1 Score: 303 bits (776), Expect = 1.410e-99 Identity = 152/205 (74.15%), Postives = 176/205 (85.85%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609 STR+VEQA+ RSD+ VVSNPEFLREGTAV DFLNPDRVVIGADDQ+AA RVA LY+G+ AP+ VTDPASAET KYA+NAFLATK+SF NAIAAVCEAVGADVNDV+LGMGYD RIG FL+PGPGWGGSCFPKDS A++ IAEDAGYDF L++GV+ VNE+QF+R+ KV +LDG T+A+ GL FKA TDD R+SPAL+V Sbjct: 121 STRVVEQALGRSDVAVVSNPEFLREGTAVHDFLNPDRVVIGADDQSAAIRVAGLYIGLPAPLQVTDPASAETIKYASNAFLATKISFVNAIAAVCEAVGADVNDVVLGMGYDKRIGDAFLKPGPGWGGSCFPKDSHALVRIAEDAGYDFDLLKGVISVNEDQFERVADKVQRAVGGSLDGVTVAVWGLTFKARTDDLRDSPALNV 325
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A6G0A307_9ACTN (UDP-glucose 6-dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A307_9ACTN) HSP 1 Score: 301 bits (771), Expect = 8.810e-99 Identity = 148/205 (72.20%), Postives = 179/205 (87.32%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609 STR+VE+A+ R D+ VVSNPEFLREG+AV DFL+PDRVVIG +DQAAA RVA++Y+G+ AP+MVTDPASAET KYA+NAFLATK+SF NA+AAVCEAVGADVNDV+LGMGYD RIG EFLRPGPGWGGSCFPKD+ A+I IAEDAGYDF L++GVVEVNEEQF+R+ KV ++ +L+G T+A GL FK+ TDD R+SP+L+V Sbjct: 121 STRVVERALHRGDVHVVSNPEFLREGSAVHDFLHPDRVVIGCEDQAAAVRVASVYIGIPAPIMVTDPASAETIKYASNAFLATKISFVNAVAAVCEAVGADVNDVVLGMGYDKRIGQEFLRPGPGWGGSCFPKDTNALIRIAEDAGYDFRLLKGVVEVNEEQFERVADKVAALAGGSLEGITVAAWGLTFKSRTDDMRDSPSLAV 325
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A5Q2RSE2_9ACTN (UDP-glucose 6-dehydrogenase n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RSE2_9ACTN) HSP 1 Score: 300 bits (769), Expect = 1.770e-98 Identity = 148/205 (72.20%), Postives = 176/205 (85.85%), Query Frame = 1 Query: 1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609 STR+VE+A+ RSD+ VVSNPEFLREG+AV DFL PDRVVIGAD QAAA RVA LY+G+ AP+MVTDPASAET KYAANAFLATKLSF NA+AA+CEAVGADVNDV+LG+GYD RIG EFL+PGPGWGGSCFPKD+RA+ IAEDAGYDF ++GV++VNEEQFDR+ K+ + +L+G T+A+ GL FKA TDD RESP+L + Sbjct: 121 STRVVERALGRSDVHVVSNPEFLREGSAVSDFLKPDRVVIGADSQAAAIRVAGLYVGIPAPIMVTDPASAETIKYAANAFLATKLSFVNAVAAICEAVGADVNDVMLGIGYDKRIGQEFLQPGPGWGGSCFPKDTRALARIAEDAGYDFFFLKGVLDVNEEQFDRVADKIARLAGGSLEGKTVAVWGLTFKARTDDLRESPSLEI 325 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108865.1860.1 >prot_M-pyrifera_M_contig108865.1860.1 ID=prot_M-pyrifera_M_contig108865.1860.1|Name=mRNA_M-pyrifera_M_contig108865.1860.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp MKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVback to top mRNA from alignment at M-pyrifera_M_contig108865:1..609- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108865.1860.1 ID=mRNA_M-pyrifera_M_contig108865.1860.1|Name=mRNA_M-pyrifera_M_contig108865.1860.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108865:1..609- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108865:1..609- >mRNA_M-pyrifera_M_contig108865.1860.1 ID=mRNA_M-pyrifera_M_contig108865.1860.1|Name=mRNA_M-pyrifera_M_contig108865.1860.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig108865:1..609- (Macrocystis pyrifera P11B4 male)back to top |