mRNA_M-pyrifera_M_contig108865.1860.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108865.1860.1
Unique NamemRNA_M-pyrifera_M_contig108865.1860.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A2D8LSV1_9ACTN (UDP-glucose 6-dehydrogenase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LSV1_9ACTN)

HSP 1 Score: 349 bits (895), Expect = 1.770e-117
Identity = 173/203 (85.22%), Postives = 189/203 (93.10%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609
            ST LVEQA+ RSDIPVVSNPEFLREG+AVDDFL+PDRVVIG+DD+AAA  VA+LY+   AP+MVTDPASAETCKYAANAFLA KLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSC PKDS AIISIAEDAGYDFALMRGV++ N+EQFDRIVRKV SVT+LDGAT+ +LG+AFKAGTDDTRESPA+ V
Sbjct:  128 STLLVEQALGRSDIPVVSNPEFLREGSAVDDFLHPDRVVIGSDDEAAASHVASLYVDCGAPIMVTDPASAETCKYAANAFLAAKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCLPKDSNAIISIAEDAGYDFALMRGVIQANDEQFDRIVRKVESVTSLDGATVGVLGIAFKAGTDDTRESPAIEV 330          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A358A1V4_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A1V4_9ACTN)

HSP 1 Score: 343 bits (879), Expect = 4.710e-115
Identity = 174/203 (85.71%), Postives = 185/203 (91.13%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609
            ST LVEQA+ RSDIPVVSNPEFLREG+AVDDFL+PDRVVIG+DDQAAA RVA LY    APVM TDPASAETCKYAANAFLATKLSF NAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSC PKDS AIISIA+DAGYDFALMRGVVE N+EQFDRIVRKV SV  L GAT+ +LG+AFKAGTDDTRESPA++V
Sbjct:  128 STLLVEQALGRSDIPVVSNPEFLREGSAVDDFLHPDRVVIGSDDQAAADRVALLYADCGAPVMRTDPASAETCKYAANAFLATKLSFANAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCLPKDSTAIISIADDAGYDFALMRGVVEANQEQFDRIVRKVESVVPLKGATVGVLGIAFKAGTDDTRESPAIAV 330          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A3M2GIR1_ACTSX (UDP-glucose 6-dehydrogenase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GIR1_ACTSX)

HSP 1 Score: 338 bits (866), Expect = 6.630e-113
Identity = 165/203 (81.28%), Postives = 184/203 (90.64%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609
            STRLVEQA+ R DIPVVSNPEFLREGTA+ DFL PDRVVIGA+DQAAAGRVA+LYLGVRAP+MVTDPASAET KYAANAFLATKLSF NA+AAVCEAVGADVNDVLL MGYDHRIGHEF+RPGPGWGGSC PKD+RA+I IAEDAGYDF+L+RGV+ VNEEQ DR+V K+     LDGA +A+ GLAFKAGTDDTR+SPAL++
Sbjct:  141 STRLVEQALARGDIPVVSNPEFLREGTAITDFLEPDRVVIGAEDQAAAGRVASLYLGVRAPIMVTDPASAETTKYAANAFLATKLSFVNAVAAVCEAVGADVNDVLLAMGYDHRIGHEFMRPGPGWGGSCLPKDTRALIRIAEDAGYDFSLLRGVIAVNEEQLDRVVAKIADGVELDGARVAVWGLAFKAGTDDTRDSPALAI 343          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A7Y2D7Y2_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D7Y2_9ACTN)

HSP 1 Score: 318 bits (814), Expect = 3.980e-105
Identity = 155/205 (75.61%), Postives = 182/205 (88.78%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609
            STRLVEQA+ RSD+ VVSNPEFLREG+AVDDFLNPDRVVIGA++Q AA RVA+L+LG RAP++VTDPASAET KYA+NAFLATKLSF NA+AAVCEAVGADVNDV+LG+GYD RIGH+FLRPGPGWGGSCFPKD+RA+ISIAED GYDF L+RGV++VN+EQFDR+ +KV      ++ G ++ +LGL FKAGTDD RESPAL V
Sbjct:  128 STRLVEQALGRSDVTVVSNPEFLREGSAVDDFLNPDRVVIGAENQTAATRVASLFLGTRAPILVTDPASAETTKYASNAFLATKLSFVNAVAAVCEAVGADVNDVMLGIGYDQRIGHQFLRPGPGWGGSCFPKDTRAMISIAEDGGYDFTLLRGVIDVNDEQFDRVTQKVIDAAGGSISGVSVGVLGLTFKAGTDDVRESPALEV 332          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A6J7QRF8_9ZZZZ (UDP-glucose 6-dehydrogenase n=4 Tax=root TaxID=1 RepID=A0A6J7QRF8_9ZZZZ)

HSP 1 Score: 311 bits (797), Expect = 1.310e-102
Identity = 155/205 (75.61%), Postives = 179/205 (87.32%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609
            STRLVEQA+ RSD+ VVSNPEFLREG+AV DFL+PDRVVIGADDQAAA RVA+LYLGVRAP+M+TD  SAET KYA+NAFLATKLSF NA+AAVCEAV ADVNDV+LG+GYD RIGHEFL+PGPGWGGSCFPKD+RA++ IAEDAGYDFAL+RGV+ VN+EQF R+V+KV      +L+G  I  LG+ FKAGTDD RESPAL +
Sbjct:  128 STRLVEQALGRSDVFVVSNPEFLREGSAVSDFLHPDRVVIGADDQAAASRVASLYLGVRAPIMITDAPSAETIKYASNAFLATKLSFANAVAAVCEAVDADVNDVMLGIGYDRRIGHEFLKPGPGWGGSCFPKDTRAMLRIAEDAGYDFALLRGVIAVNDEQFARVVQKVVDAAGGSLEGVRIGALGITFKAGTDDIRESPALEI 332          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A538DD53_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DD53_9ACTN)

HSP 1 Score: 311 bits (796), Expect = 1.800e-102
Identity = 154/205 (75.12%), Postives = 177/205 (86.34%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609
            STRLVE A+ RSDI VVSNPEFLREG+AV DF+NPDRVVIGA+DQ+AA RVA+LYLGVRAP+M+TD A+AET KYA+NAFLATKLSF NA+AAVCE VGADVNDVLLGMGYD RIGHEFLRPGPGWGGSCFPKD+RA+I IAEDAGYDF+L+RGV+ VN+EQF+R+  KV      +L+G  +  LGL FKAGTDD R SPAL +
Sbjct:  127 STRLVEHALARSDIGVVSNPEFLREGSAVADFMNPDRVVIGAEDQSAATRVASLYLGVRAPIMITDAATAETIKYASNAFLATKLSFVNAVAAVCEVVGADVNDVLLGMGYDRRIGHEFLRPGPGWGGSCFPKDTRAMIRIAEDAGYDFSLLRGVIAVNDEQFERVTEKVARCAGGSLEGVRVGALGLTFKAGTDDLRASPALEI 331          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A6B1AVB2_9ACTN (UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AVB2_9ACTN)

HSP 1 Score: 305 bits (781), Expect = 3.460e-100
Identity = 155/203 (76.35%), Postives = 172/203 (84.73%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV 609
            ST LVE+AM R DI VVSNPEFLREGTAV DFL+PDRVVIGADD A A RVA L+  + APVM+TDPASAET KYAANAFLATKLSF N IAAVCEAVGADV DVL  MG D RIG EFL PGPGWGGSCFPKD+RAIIS+AEDAGYDF+LMRGV++ N+EQF R+V K  S  +L+G+T+ALLGLAFKAGTDDTR SPAL +
Sbjct:  130 STLLVEEAMNRPDIAVVSNPEFLREGTAVTDFLSPDRVVIGADDPAVADRVADLHRSIGAPVMITDPASAETIKYAANAFLATKLSFVNTIAAVCEAVGADVGDVLAAMGLDKRIGGEFLVPGPGWGGSCFPKDTRAIISMAEDAGYDFSLMRGVLKANDEQFKRVVNKAASAVSLNGSTVALLGLAFKAGTDDTRNSPALEI 332          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A7X7D2C5_9ACTN (UDP-glucose 6-dehydrogenase (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D2C5_9ACTN)

HSP 1 Score: 303 bits (776), Expect = 1.410e-99
Identity = 152/205 (74.15%), Postives = 176/205 (85.85%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609
            STR+VEQA+ RSD+ VVSNPEFLREGTAV DFLNPDRVVIGADDQ+AA RVA LY+G+ AP+ VTDPASAET KYA+NAFLATK+SF NAIAAVCEAVGADVNDV+LGMGYD RIG  FL+PGPGWGGSCFPKDS A++ IAEDAGYDF L++GV+ VNE+QF+R+  KV      +LDG T+A+ GL FKA TDD R+SPAL+V
Sbjct:  121 STRVVEQALGRSDVAVVSNPEFLREGTAVHDFLNPDRVVIGADDQSAAIRVAGLYIGLPAPLQVTDPASAETIKYASNAFLATKISFVNAIAAVCEAVGADVNDVVLGMGYDKRIGDAFLKPGPGWGGSCFPKDSHALVRIAEDAGYDFDLLKGVISVNEDQFERVADKVQRAVGGSLDGVTVAVWGLTFKARTDDLRDSPALNV 325          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A6G0A307_9ACTN (UDP-glucose 6-dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A307_9ACTN)

HSP 1 Score: 301 bits (771), Expect = 8.810e-99
Identity = 148/205 (72.20%), Postives = 179/205 (87.32%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609
            STR+VE+A+ R D+ VVSNPEFLREG+AV DFL+PDRVVIG +DQAAA RVA++Y+G+ AP+MVTDPASAET KYA+NAFLATK+SF NA+AAVCEAVGADVNDV+LGMGYD RIG EFLRPGPGWGGSCFPKD+ A+I IAEDAGYDF L++GVVEVNEEQF+R+  KV ++   +L+G T+A  GL FK+ TDD R+SP+L+V
Sbjct:  121 STRVVERALHRGDVHVVSNPEFLREGSAVHDFLHPDRVVIGCEDQAAAVRVASVYIGIPAPIMVTDPASAETIKYASNAFLATKISFVNAVAAVCEAVGADVNDVVLGMGYDKRIGQEFLRPGPGWGGSCFPKDTNALIRIAEDAGYDFRLLKGVVEVNEEQFERVADKVAALAGGSLEGITVAAWGLTFKSRTDDMRDSPSLAV 325          
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Match: A0A5Q2RSE2_9ACTN (UDP-glucose 6-dehydrogenase n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RSE2_9ACTN)

HSP 1 Score: 300 bits (769), Expect = 1.770e-98
Identity = 148/205 (72.20%), Postives = 176/205 (85.85%), Query Frame = 1
Query:    1 STRLVEQAMKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGVRAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLGMGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEVNEEQFDRIVRKVGSVT--ALDGATIALLGLAFKAGTDDTRESPALSV 609
            STR+VE+A+ RSD+ VVSNPEFLREG+AV DFL PDRVVIGAD QAAA RVA LY+G+ AP+MVTDPASAET KYAANAFLATKLSF NA+AA+CEAVGADVNDV+LG+GYD RIG EFL+PGPGWGGSCFPKD+RA+  IAEDAGYDF  ++GV++VNEEQFDR+  K+  +   +L+G T+A+ GL FKA TDD RESP+L +
Sbjct:  121 STRVVERALGRSDVHVVSNPEFLREGSAVSDFLKPDRVVIGADSQAAAIRVAGLYVGIPAPIMVTDPASAETIKYAANAFLATKLSFVNAVAAICEAVGADVNDVMLGIGYDKRIGQEFLQPGPGWGGSCFPKDTRALARIAEDAGYDFFFLKGVLDVNEEQFDRVADKIARLAGGSLEGKTVAVWGLTFKARTDDLRESPSLEI 325          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108865.1860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LSV1_9ACTN1.770e-11785.22UDP-glucose 6-dehydrogenase n=4 Tax=Acidimicrobiac... [more]
A0A358A1V4_9ACTN4.710e-11585.71UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiac... [more]
A0A3M2GIR1_ACTSX6.630e-11381.28UDP-glucose 6-dehydrogenase n=1 Tax=Actinomyces sp... [more]
A0A7Y2D7Y2_9ACTN3.980e-10575.61UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobial... [more]
A0A6J7QRF8_9ZZZZ1.310e-10275.61UDP-glucose 6-dehydrogenase n=4 Tax=root TaxID=1 R... [more]
A0A538DD53_9ACTN1.800e-10275.12UDP-glucose 6-dehydrogenase n=1 Tax=Actinomycetia ... [more]
A0A6B1AVB2_9ACTN3.460e-10076.35UDP-glucose 6-dehydrogenase n=1 Tax=Acidimicrobiac... [more]
A0A7X7D2C5_9ACTN1.410e-9974.15UDP-glucose 6-dehydrogenase (Fragment) n=1 Tax=Aci... [more]
A0A6G0A307_9ACTN8.810e-9972.20UDP-glucose 6-dehydrogenase n=2 Tax=Bacteria TaxID... [more]
A0A5Q2RSE2_9ACTN1.770e-9872.20UDP-glucose 6-dehydrogenase n=2 Tax=Actinomarinico... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108865contigM-pyrifera_M_contig108865:1..609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score280.0
Seed ortholog evalue8.3e-73
Seed eggNOG ortholog1229780.BN381_10176
Preferred nametuaD
KEGG rclassRC00291
KEGG koko:K00012
KEGG ReactionR00286
KEGG Pathwayko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100
KEGG ModuleM00014,M00129,M00361,M00362
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UDP binding domain
EggNOG OGs2GJQB@201174,3UW6R@52018,COG1004@1,COG1004@2
EC1.1.1.22
COG Functional cat.M
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size609
Cds size585
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815598.4574556-CDS-M-pyrifera_M_contig108865:0..5851622815598.4574556-CDS-M-pyrifera_M_contig108865:0..585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108865 1..585 -
1692277480.985774-CDS-M-pyrifera_M_contig108865:0..5851692277480.985774-CDS-M-pyrifera_M_contig108865:0..585Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108865 1..585 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815598.4717875-UTR-M-pyrifera_M_contig108865:585..6091622815598.4717875-UTR-M-pyrifera_M_contig108865:585..609Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig108865 586..609 -
1692277481.000233-UTR-M-pyrifera_M_contig108865:585..6091692277481.000233-UTR-M-pyrifera_M_contig108865:585..609Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig108865 586..609 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108865.1860.1prot_M-pyrifera_M_contig108865.1860.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108865 1..585 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108865.1860.1

>prot_M-pyrifera_M_contig108865.1860.1 ID=prot_M-pyrifera_M_contig108865.1860.1|Name=mRNA_M-pyrifera_M_contig108865.1860.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
MKRSDIPVVSNPEFLREGTAVDDFLNPDRVVIGADDQAAAGRVAALYLGV
RAPVMVTDPASAETCKYAANAFLATKLSFTNAIAAVCEAVGADVNDVLLG
MGYDHRIGHEFLRPGPGWGGSCFPKDSRAIISIAEDAGYDFALMRGVVEV
NEEQFDRIVRKVGSVTALDGATIALLGLAFKAGTDDTRESPALSV
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mRNA from alignment at M-pyrifera_M_contig108865:1..609-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108865.1860.1 ID=mRNA_M-pyrifera_M_contig108865.1860.1|Name=mRNA_M-pyrifera_M_contig108865.1860.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108865:1..609- (Macrocystis pyrifera P11B4 male)
TCGACCCGGCTCGTCGAGCAGGCCATGAAGCGGTCCGACATCCCGGTCGT GTCCAACCCCGAGTTCCTCCGCGAGGGCACGGCGGTCGACGATTTCCTCA ACCCGGACCGCGTGGTCATCGGCGCCGACGACCAGGCCGCGGCCGGCCGT GTCGCCGCCCTCTATCTCGGCGTGCGTGCGCCGGTGATGGTCACCGACCC CGCCTCGGCCGAGACCTGCAAGTACGCTGCCAACGCCTTCCTCGCCACCA AGCTCTCGTTCACCAACGCCATCGCGGCGGTGTGTGAGGCCGTGGGGGCC GACGTCAACGACGTGCTCCTGGGCATGGGCTACGACCATCGCATCGGCCA CGAATTCCTCCGGCCCGGACCGGGCTGGGGCGGCTCGTGTTTCCCGAAGG ACAGCCGCGCGATCATCTCCATCGCCGAAGACGCCGGCTACGACTTCGCG CTCATGCGCGGCGTCGTCGAAGTGAACGAAGAACAGTTCGACCGCATCGT GCGCAAGGTCGGCTCCGTCACCGCACTCGACGGCGCGACCATCGCGCTTC TCGGGCTGGCCTTCAAGGCCGGCACCGACGACACCCGTGAGTCGCCCGCC CTTTCGGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig108865:1..609-

>mRNA_M-pyrifera_M_contig108865.1860.1 ID=mRNA_M-pyrifera_M_contig108865.1860.1|Name=mRNA_M-pyrifera_M_contig108865.1860.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig108865:1..609- (Macrocystis pyrifera P11B4 male)
ATGAAGCGGTCCGACATCCCGGTCGTGTCCAACCCCGAGTTCCTCCGCGA
GGGCACGGCGGTCGACGATTTCCTCAACCCGGACCGCGTGGTCATCGGCG
CCGACGACCAGGCCGCGGCCGGCCGTGTCGCCGCCCTCTATCTCGGCGTG
CGTGCGCCGGTGATGGTCACCGACCCCGCCTCGGCCGAGACCTGCAAGTA
CGCTGCCAACGCCTTCCTCGCCACCAAGCTCTCGTTCACCAACGCCATCG
CGGCGGTGTGTGAGGCCGTGGGGGCCGACGTCAACGACGTGCTCCTGGGC
ATGGGCTACGACCATCGCATCGGCCACGAATTCCTCCGGCCCGGACCGGG
CTGGGGCGGCTCGTGTTTCCCGAAGGACAGCCGCGCGATCATCTCCATCG
CCGAAGACGCCGGCTACGACTTCGCGCTCATGCGCGGCGTCGTCGAAGTG
AACGAAGAACAGTTCGACCGCATCGTGCGCAAGGTCGGCTCCGTCACCGC
ACTCGACGGCGCGACCATCGCGCTTCTCGGGCTGGCCTTCAAGGCCGGCA
CCGACGACACCCGTGAGTCGCCCGCCCTTTCGGTCATGAAGCGGTCCGAC
ATCCCGGTCGTGTCCAACCCCGAGTTCCTCCGCGAGGGCACGGCGGTCGA
CGATTTCCTCAACCCGGACCGCGTGGTCATCGGCGCCGACGACCAGGCCG
CGGCCGGCCGTGTCGCCGCCCTCTATCTCGGCGTGCGTGCGCCGGTGATG
GTCACCGACCCCGCCTCGGCCGAGACCTGCAAGTACGCTGCCAACGCCTT
CCTCGCCACCAAGCTCTCGTTCACCAACGCCATCGCGGCGGTGTGTGAGG
CCGTGGGGGCCGACGTCAACGACGTGCTCCTGGGCATGGGCTACGACCAT
CGCATCGGCCACGAATTCCTCCGGCCCGGACCGGGCTGGGGCGGCTCGTG
TTTCCCGAAGGACAGCCGCGCGATCATCTCCATCGCCGAAGACGCCGGCT
ACGACTTCGCGCTCATGCGCGGCGTCGTCGAAGTGAACGAAGAACAGTTC
GACCGCATCGTGCGCAAGGTCGGCTCCGTCACCGCACTCGACGGCGCGAC
CATCGCGCTTCTCGGGCTGGCCTTCAAGGCCGGCACCGACGACACCCGTG
AGTCGCCCGCCCTTTCGGTC
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