mRNA_M-pyrifera_M_contig108862.1857.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A5A8D368_CAFRO (Oxoglutarate dehydrogenase (succinyl-transferring) n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8D368_CAFRO) HSP 1 Score: 233 bits (595), Expect = 5.840e-68 Identity = 114/195 (58.46%), Postives = 143/195 (73.33%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLLGISS-RQTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQGTHV 582 GH AA LDP+G + EL ++YGL +AD + V+ F G+ G LG + + T+ + + +LR VYCG+ G+EYMHI DR +CNW+RER+E+ FS + K QIFDRL HADTLE+FLA K+NTAKRFGLEG ETLIPGLK ++D GT +GV+ IVIGMPHRGRLNTLVNVVRKPA+ LFREF +HV Sbjct: 126 GHEAANLDPLGFTKPSERAAMELDPASYGLKDADLDKPVNAAGFEGLKGFLGPDAGKATVRELIERLRRVYCGSTGFEYMHILDRSKCNWIRERVELDSAFEFSPEAKEQIFDRLVHADTLETFLAKKFNTAKRFGLEGCETLIPGLKSLIDRGTELGVTDIVIGMPHRGRLNTLVNVVRKPAKALFREFTESHV 320
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A7S0YTI5_9CHLO (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0YTI5_9CHLO) HSP 1 Score: 210 bits (534), Expect = 1.800e-59 Identity = 97/198 (48.99%), Postives = 141/198 (71.21%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLLGISSRQTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQGTHVDMDS 594 GH A++LDP+G R SEL+ ++YG SEAD E +G+++ L +T+ + + +L+ YCG++GYEYMHI DR++CNW+RERIE +DPPA++ ++KL + +R+ +D E+FLA+K++ AKRFGLEGAE++IPG+K M+D ++GV +VIGMPHRGRLN L NVVRKP +F EF G ++ DS Sbjct: 130 GHFASQLDPLGLQDRKVP--SELNPASYGFSEADLDREFFIGNWNQSGFLEEGRPTRTLREVLQRLKETYCGSIGYEYMHIPDRDKCNWIRERIETIDPPAYTKQQKLHVLNRIAWSDMFETFLANKFSAAKRFGLEGAESMIPGIKAMIDSSADLGVEDVVIGMPHRGRLNVLANVVRKPMSQIFCEFAGKVINKDS 325
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A7S1GG60_9STRA (Oxoglutarate dehydrogenase (succinyl-transferring) (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GG60_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.540e-58 Identity = 100/191 (52.36%), Postives = 125/191 (65.45%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLLGISSRQTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQG 573 GH AA+LDP+ + + EL YG + AD + E L F GIAG LG + R +GD + R YC +G+EYMHI DRE CNWLRERIEV P ++ +EK QIFDR+ +D E FLA KY+ AKRFGLEG ++LI G+K +D G S +VIGMPHRGRLN L NV+RKP E++FREF G Sbjct: 93 GHEAAELDPL--RLAASKGPKELDPEEYGFTAADMEREFSLAGFEGIAGFLGTARRAKLGDLLKSFRKAYCDKIGWEYMHIQDRETCNWLRERIEV-KPTPYTKEEKAQIFDRVAFSDHFERFLAQKYSAAKRFGLEGCDSLIAGIKATIDTSVEHGCSDVVIGMPHRGRLNMLSNVIRKPNELIFREFHG 280
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A482S454_9ARCH (2-oxoglutarate dehydrogenase E1 component (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S454_9ARCH) HSP 1 Score: 198 bits (504), Expect = 5.050e-58 Identity = 97/206 (47.09%), Postives = 136/206 (66.02%), Query Frame = 1 Query: 1 GHLAAKLDPIG-RNVRTPEEISELHLSNYGLSEADFKEEVDL-----GSFSGIAGLLGISSRQ-TIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQGTHVDMDSY 597 GH A LDP+G + R+P+ EL +G ++AD ++L G +G +LG + T+ +S L+ YC ++G EYMH+ +E+CNW+R+++E FS ++K+ I +RLC AD E FLA+KYNTAKRFGLEG E++IPGLK MVD G+ +G+ S V GMPHRGRLN L NV+RKP +F+EF+GTH D+D Y Sbjct: 109 GHEVANLDPLGMHSFRSPQPPPELDYKYHGFTDADLDRTLNLLGRSTGGNTGYLDILGSTRPHITLRQVLSNLKKTYCSSLGVEYMHMQSQEKCNWVRDQVENPKWMHFSKQKKMHILERLCFADHFEQFLANKYNTAKRFGLEGGESVIPGLKAMVDRGSELGIESFVFGMPHRGRLNVLANVMRKPLPQIFKEFEGTHYDLDEY 314
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A3R7B999_9STRA (2-oxogl_dehyd_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B999_9STRA) HSP 1 Score: 196 bits (498), Expect = 6.780e-58 Identity = 99/204 (48.53%), Postives = 135/204 (66.18%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGS--FSGIAGLLG-ISSRQ--TIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQGTHVDMDSY 597 GH AKLDP+G +VR + EL +S YG +EAD + + + SG+ G L +S Q T+G V +L+ Y ++G +YMHISDRE+CNW+R +E + + +KL I +RL + E FL +KYNT KRFGL+G E+LIPGLK M+D T +G+ +VIGMPHRGRLN L NV++KP +F+EFQGTHVD+D Y Sbjct: 128 GHEVAKLDPLGLDVRPS--LPELDISMYGFTEADLDKTISIPKNFASGVTGFLEELSDGQNPTLGYIVQRLKETYTSSIGVQYMHISDREKCNWIRTNLESLVKKDETKAKKLHILERLAFSVVFERFLGNKYNTTKRFGLDGGESLIPGLKYMIDRATELGMEHVVIGMPHRGRLNVLSNVIQKPIHQIFKEFQGTHVDIDKY 329
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A2P4XIG5_9STRA (Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIG5_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.550e-57 Identity = 94/205 (45.85%), Postives = 137/205 (66.83%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGS--FSGIAGLLGI----SSRQTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQGTHVDMDSY 597 GH AA LDP+G R E+ +L + YG +E D + + SG++G L ++ T+G V +L+ YC ++G +YMH+ +RE+CNW+R ++E + S ++K+ I +RL + E FL +KYNT KRFGL+GAE+LIPGLK M+D GT +G+ +VIGMPHRGRLN L NV+RKP + +F+EFQGTH+D++SY Sbjct: 139 GHEAANLDPLGLQERP--ELPDLDIKMYGFTEKDLDRVIAIPKNFSSGVSGFLEELADGNNSMTLGQIVERLKETYCSSIGVQYMHMLNREQCNWIRAKMEHLVKDEESKEKKMHILERLAFSVVFERFLGNKYNTTKRFGLDGAESLIPGLKFMIDRGTELGMEHLVIGMPHRGRLNVLSNVIRKPIQQIFKEFQGTHIDVESY 341
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A1D6ECN3_MAIZE (2-oxoglutarate dehydrogenase E1 component n=4 Tax=Zea mays TaxID=4577 RepID=A0A1D6ECN3_MAIZE) HSP 1 Score: 197 bits (501), Expect = 6.000e-57 Identity = 103/192 (53.65%), Postives = 129/192 (67.19%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLLGISSR-QTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQG 573 GHL AKLDP+G R ++ L YG SEAD E LG + +AG L + QT+ + +L YCGT+GYEYMHI DRE+CNWLR+RIE V+P ++ + + DRL + E+FLA+K+ TAKRFGLEGAETLIPG+K+M D ++GV SIVIGMPHRGRLN L NVVRKP +F EF G Sbjct: 135 GHLKAKLDPLGLEERPVPDV--LDPGFYGFSEADLDREFFLGVWM-MAGFLSENRPVQTLRSVLERLEQAYCGTIGYEYMHIPDREKCNWLRDRIETVNPREYTYDRRQVMLDRLIWSTQFENFLATKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSG 323
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: E1ZAL3_CHLVA (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZAL3_CHLVA) HSP 1 Score: 201 bits (510), Expect = 1.340e-56 Identity = 98/191 (51.31%), Postives = 129/191 (67.54%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLLGISSRQTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQG 573 GH AA+LDP+G + R + EL + YG +E D E LG+++ + +T+G+ + +LR YC ++GYEYMHI D ERCNWLR RIE + +S +EKL+I DRL ++ ESFLA+KY AKRFGLEG E LIPG+K ++D + GVSS+VIGMPHRGRLN L NV+RKP E +F EF G Sbjct: 131 GHYAAQLDPLGIDERP--RVKELDPAYYGFTEKDLNREFYLGTWNKEGFMAEGRQVRTLGEILDRLRETYCSSIGYEYMHIPDSERCNWLRARIETAERQEYSQEEKLRILDRLTWSEMFESFLANKYTAAKRFGLEGCEALIPGMKALIDSAADQGVSSVVIGMPHRGRLNVLANVMRKPMEAVFSEFAG 319
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: C1N3L8_MICPC (Oxoglutarate dehydrogenase (succinyl-transferring) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3L8_MICPC) HSP 1 Score: 201 bits (512), Expect = 2.070e-56 Identity = 102/191 (53.40%), Postives = 130/191 (68.06%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLLGISSRQTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQG 573 GH AAKLDP+G +VR + EL + YG ++AD E LGS+ L + QT+ +++LR YCGTVGYEYMHI+DR++CNWLRERIE + +S + K + DRL +D ESFL++KY AKRFGLEG ETLIPG K+ +D +GV SI IGMPHRGRLN L NVVRKP + +F EF+G Sbjct: 176 GHAAAKLDPLGLDVR--DVPVELDPALYGFTDADLDREFFLGSWRMKGFLSEDNPVQTLRQILTRLRETYCGTVGYEYMHIADRDQCNWLRERIEKAEKHEYSVERKKVLLDRLAWSDMFESFLSNKYTAAKRFGLEGCETLIPGFKEAIDKAAELGVESITIGMPHRGRLNVLANVVRKPLQTIFNEFKG 364
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Match: A0A8J5FAL4_ZINOF (Oxoglutarate dehydrogenase (succinyl-transferring) n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FAL4_ZINOF) HSP 1 Score: 201 bits (510), Expect = 3.500e-56 Identity = 103/192 (53.65%), Postives = 130/192 (67.71%), Query Frame = 1 Query: 1 GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLLGISSR-QTIGDFVSQLRSVYCGTVGYEYMHISDRERCNWLRERIEVVDPPAFSSKEKLQIFDRLCHADTLESFLASKYNTAKRFGLEGAETLIPGLKQMVDVGTNMGVSSIVIGMPHRGRLNTLVNVVRKPAEMLFREFQG 573 GH+ AKLDP+G R + +L L+ YG SEAD E LG + ++G L + QT+ + +L YCGTVGYEYMHI DRE+CNWLRERIE V+P ++ + + I DRL + E+FLA+K+ AKRFGLEG ETLIPG+K+M D ++GV SIVIGMPHRGRLN L NVVRKP +F EF G Sbjct: 132 GHMKAKLDPLGLEERGT--VDDLDLALYGFSEADLDREFFLGVWK-MSGFLSENRPVQTLRSILERLEQAYCGTVGYEYMHIPDREKCNWLRERIETVNPREYTRERRAVILDRLTWSTLFENFLATKWKAAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSG 320 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108862.1857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108862.1857.1 >prot_M-pyrifera_M_contig108862.1857.1 ID=prot_M-pyrifera_M_contig108862.1857.1|Name=mRNA_M-pyrifera_M_contig108862.1857.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp GHLAAKLDPIGRNVRTPEEISELHLSNYGLSEADFKEEVDLGSFSGIAGLback to top mRNA from alignment at M-pyrifera_M_contig108862:3..599+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108862.1857.1 ID=mRNA_M-pyrifera_M_contig108862.1857.1|Name=mRNA_M-pyrifera_M_contig108862.1857.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=597bp|location=Sequence derived from alignment at M-pyrifera_M_contig108862:3..599+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108862:3..599+ >mRNA_M-pyrifera_M_contig108862.1857.1 ID=mRNA_M-pyrifera_M_contig108862.1857.1|Name=mRNA_M-pyrifera_M_contig108862.1857.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1194bp|location=Sequence derived from alignment at M-pyrifera_M_contig108862:3..599+ (Macrocystis pyrifera P11B4 male)back to top |