mRNA_M-pyrifera_M_contig108837.1851.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: UPI0009E1F039 (nucleolar complex protein 4 homolog n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1F039) HSP 1 Score: 140 bits (354), Expect = 6.690e-37 Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 13 DVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 +V ++ H+ F A W +FL LPLT+ ++K+VLL++ V P L +P+L MDFLT SYN GG+ SLLALNSLF+LI +HNLDYP F+ KLYAL P IF+V + +FF LFL S++LP Y+ A Sbjct: 241 NVLDLKQHRNVFTAVWIAFLALPLTSEIHKKVLLNLHSDVLPHLTEPKLLMDFLTDSYNTGGVTSLLALNSLFVLIHKHNLDYPDFFKKLYALFGPNIFYVKYQARFFHLADLFLMSTHLPAYLVA 366
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: A0A2D4G0I8_MICCO (CBF domain-containing protein (Fragment) n=1 Tax=Micrurus corallinus TaxID=54390 RepID=A0A2D4G0I8_MICCO) HSP 1 Score: 132 bits (333), Expect = 1.450e-36 Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1 Query: 1 QGQFDVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 Q ++ V + H+R F+ W FL+ L SLYK+VL+ + + P L +P L MDFLT +Y+VGG +SLLALN LF+LI +HNL+YP FY KLY+LL P IF V + +FF+ LFL SS+LP Y+ A Sbjct: 16 QEEWKVSKLKEHRRAFERMWLGFLKYKLPGSLYKKVLVILHDSILPHLNEPTLLMDFLTVAYDVGGAISLLALNGLFVLILQHNLEYPDFYTKLYSLLDPSIFHVKYRARFFRLLDLFLSSSHLPAYLVA 145
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: A0A7S4HGT6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HGT6_9EUKA) HSP 1 Score: 140 bits (353), Expect = 1.770e-36 Identity = 66/126 (52.38%), Postives = 88/126 (69.84%), Query Frame = 1 Query: 13 DVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 +VF V H FQ AW + L+LPL+ +YK+VLL MPQ + P P PEL DF +Y +GG+ S+LAL LF+L++++NL+Y FY LYALL P IF V +S +FF+ C+LF SSYLPEY+CA Sbjct: 300 NVFKVENHSEAFQNAWRALLRLPLSPLVYKQVLLDMPQHILPYFPNPELLGDFFKDAYKMGGMSSVLALQGLFVLVSKYNLEYKDFYRDLYALLEPSIFLVKYSGKFFELCRLFFASSYLPEYLCA 425
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: UPI000A2A72EF (nucleolar complex protein 4 homolog A n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A72EF) HSP 1 Score: 137 bits (344), Expect = 2.010e-35 Identity = 69/126 (54.76%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 13 DVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 D+F AHK+ F AW +FL LT+ ++K+VLL++ V P + P+L MDFLT SYN GG +SLLALN LFILI +HNLDYP FY KLYALL P IF V + +FF LFL S++LP Y+ A Sbjct: 247 DLFLXKAHKKQFSKAWLAFLSQSLTSEMHKKVLLNLHTSVIPYMNDPKLLMDFLTDSYNSGGAISLLALNGLFILIHKHNLDYPDFYKKLYALLEPGIFHVKYQSRFFHLLDLFLTSTHLPAYLVA 372
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: UPI0003F0D5E6 (nucleolar complex protein 4 homolog n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0D5E6) HSP 1 Score: 136 bits (342), Expect = 3.090e-35 Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 16 VFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 V ++ H++ FQ W SFL+ L SLYK+VL+ M + + P L +P L MDFLTS+Y+VGG +SLLALN LFILI +HNL+YP FY KLY+LL P +F V + +FF LFL SS+LP Y+ A Sbjct: 242 VAHLREHRKVFQQMWLSFLKHKLPVSLYKKVLVIMHEAILPHLAQPTLLMDFLTSAYDVGGAISLLALNGLFILIHKHNLEYPDFYQKLYSLLEPSVFHVKYRARFFHLADLFLSSSHLPAYLVA 366
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: UPI001CF2A419 (nucleolar complex protein 4 homolog B-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF2A419) HSP 1 Score: 136 bits (342), Expect = 3.760e-35 Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 25 VNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 + HKR F ++W FL++PLT+ ++K++LL++ V P + P+L MDFLT SYN GG+ SLLALN LF LI +HNLDYP F+ KLYAL P IF V + +FF LFL S++LP Y+ A Sbjct: 253 IKHHKRLFSSSWIGFLRIPLTSEIHKKILLNLHTDVLPHMTDPKLLMDFLTDSYNTGGVTSLLALNGLFFLIHQHNLDYPEFFKKLYALFEPSIFHVKYQARFFHLADLFLSSTHLPAYLIA 374
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: A0A672HQD4_SALFA (CBF domain-containing protein n=7 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HQD4_SALFA) HSP 1 Score: 135 bits (339), Expect = 1.080e-34 Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 1 Query: 1 QGQFDVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 Q + +N HKRTF+ W FL+ L +S+YKR+L+ + + P + KP L +DFLT++Y+VGG +SLLALN LF+LI +HNLDYP FY KLY LL P +F V + +FF +FL SS+LP Y+ A Sbjct: 263 QKDWKAAKLNEHKRTFERMWLGFLKYKLPSSMYKRILVILHDSILPHMSKPTLMIDFLTAAYDVGGAISLLALNGLFVLIHQHNLDYPDFYKKLYNLLEPSVFHVKYRARFFHLANIFLSSSHLPVYLVA 392
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: UPI00189E3514 (nucleolar complex protein 4 homolog n=1 Tax=Choloepus didactylus TaxID=27675 RepID=UPI00189E3514) HSP 1 Score: 134 bits (338), Expect = 1.140e-34 Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 7 QFDVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 ++ V ++ H++ FQ W SFL+ L SLYK+VL+ M + P L +P L +DFLTSSY+VGG +SLLALN LFILI +HNL+YP FY KLY+LL P IF V + +FF LFL SS+LP Y+ A Sbjct: 239 KWKVTHLKEHRKAFQLMWLSFLKRQLPLSLYKKVLVIMHDAILPHLAQPALMIDFLTSSYDVGGAISLLALNGLFILIHQHNLEYPDFYRKLYSLLDPSIFHVKYRARFFHLADLFLSSSHLPAYLVA 366
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: A0A2Y9E1C9_TRIMA (nucleolar complex protein 4 homolog n=1 Tax=Trichechus manatus latirostris TaxID=127582 RepID=A0A2Y9E1C9_TRIMA) HSP 1 Score: 134 bits (338), Expect = 1.150e-34 Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 7 QFDVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 ++ V ++ H++ FQ W SFL+ L SLYK+VL+ M + P L +P L MDFLTS+Y++GG +SLLALN LFILI +HNL+YP FY KLY+LL P +F V + +FF LFL SS+LP Y+ A Sbjct: 239 KWKVAHLKEHRKAFQLMWLSFLKHKLPVSLYKKVLVIMHDSILPHLAQPTLMMDFLTSAYDIGGAISLLALNGLFILIHKHNLEYPDFYRKLYSLLEPSVFHVKYRARFFHLADLFLSSSHLPAYLVA 366
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Match: A0A670Z7A7_PSETE (CBF domain-containing protein n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670Z7A7_PSETE) HSP 1 Score: 132 bits (333), Expect = 1.410e-34 Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 1 Query: 1 QGQFDVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKPELTMDFLTSSYNVGGIVSLLALNSLFILITRHNLDYPRFYDKLYALLTPQIFFVTHSQQFFKQCKLFLGSSYLPEYMCA 390 Q ++ V + H+R F+ W FL+ L SLYK+VL+ + + P L +P L MDFLT +Y+VGG +SLLALN LF+LI +HNL+YP FY KLY+LL P IF V + +FF+ LFL SS+LP Y+ A Sbjct: 174 QEEWKVSKLKEHRRAFERMWLGFLKYKLPGSLYKKVLVILHDSILPHLNEPTLLMDFLTVAYDVGGAISLLALNGLFVLILQHNLEYPDFYTKLYSLLDPSIFHVKYRARFFRLLDLFLSSSHLPAYLVA 303 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108837.1851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108837.1851.1 >prot_M-pyrifera_M_contig108837.1851.1 ID=prot_M-pyrifera_M_contig108837.1851.1|Name=mRNA_M-pyrifera_M_contig108837.1851.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp QGQFDVFNVNAHKRTFQAAWTSFLQLPLTASLYKRVLLHMPQGVFPSLPKback to top mRNA from alignment at M-pyrifera_M_contig108837:158..609+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108837.1851.1 ID=mRNA_M-pyrifera_M_contig108837.1851.1|Name=mRNA_M-pyrifera_M_contig108837.1851.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=452bp|location=Sequence derived from alignment at M-pyrifera_M_contig108837:158..609+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108837:158..609+ >mRNA_M-pyrifera_M_contig108837.1851.1 ID=mRNA_M-pyrifera_M_contig108837.1851.1|Name=mRNA_M-pyrifera_M_contig108837.1851.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig108837:158..609+ (Macrocystis pyrifera P11B4 male)back to top |