mRNA_M-pyrifera_M_contig108731.1836.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: A0A813CS15_9DINO (Elongation factor G, mitochondrial n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CS15_9DINO) HSP 1 Score: 275 bits (704), Expect = 5.160e-85 Identity = 139/203 (68.47%), Postives = 159/203 (78.33%), Query Frame = 1 Query: 1 AAIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AAIRR I+ FVPV +GSAFKN+GVQPLLD V YLP+P EV +VALDR DE EV L PDPD PLVALAFKLEES FGQLTY R+YQGT+K+G NV + K +VPRL R+HS+E++DVD AGEIVATFGVECASG+TFTDGT + MTSM+ PEPVISY++KP S + F KAL RFQREDPTFRV VDPES E Sbjct: 312 AAIRRGVISLQFVPVLMGSAFKNRGVQPLLDAVVRYLPSPDEVAHVALDRANDEEEVPLKPDPDLPLVALAFKLEESRFGQLTYFRIYQGTMKKGGNIVNVTKNQKIKVPRLVRMHSNEMQDVDSVGAGEIVATFGVECASGETFTDGTVQYGMTSMHVPEPVISYSVKPASPSAASNFGKALNRFQREDPTFRVRVDPESGE 514
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: A0A7S1G4Y4_9STRA (Elongation factor G, mitochondrial n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4Y4_9STRA) HSP 1 Score: 273 bits (697), Expect = 4.140e-84 Identity = 139/202 (68.81%), Postives = 162/202 (80.20%), Query Frame = 1 Query: 4 AIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AIRR TIA F PVF+GSAFKNKGVQPLLDGV YLPNP+E++N ALDR A+EA+V + D D LVALAFKLEES FGQLTY+RVYQGTL+RG TNVDR + + PRL R+H+DE+ED+D AGEIVA FGV+C SGDTFTDG LAMTSM+ PEPVISY++KPK+T+ DAF+KAL RF +EDPTFR VD ES E Sbjct: 291 AIRRATIALEFCPVFMGSAFKNKGVQPLLDGVVQYLPNPTEIKNFALDRSAEEAKVEVVTDNDQALVALAFKLEESRFGQLTYLRVYQGTLQRGKVITNVDRLQRMKTPRLVRMHADEMEDIDSVGAGEIVAMFGVDCHSGDTFTDGPM-LAMTSMFVPEPVISYSVKPKTTQQQDAFAKALNRFTKEDPTFRTFVDKESGE 491
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: A0A813AV42_9DINO (MEFG1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AV42_9DINO) HSP 1 Score: 263 bits (673), Expect = 2.410e-82 Identity = 133/202 (65.84%), Postives = 158/202 (78.22%), Query Frame = 1 Query: 4 AIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 A+RR TIAR F PVF+GSAFKNKGVQPLL+ V NYLPNP+EV ALDRD +E +V L P + PLVALAFKLEES FGQLTYMRVYQG LKRG N+DR K +VPRL R+HS+E+ED+D GEIVA FG++C SGDTFTDG K A+TSM+ P+PVISY++K K +K + FSKAL RF +EDPTFRV+VD E+ E Sbjct: 194 AVRRATIARKFAPVFMGSAFKNKGVQPLLNAVVNYLPNPTEVYTYALDRDQNEEKVLLRPSSELPLVALAFKLEESRFGQLTYMRVYQGQLKRGDFVYNIDRNQKVKVPRLVRMHSNEMEDIDSVGPGEIVAMFGIDCHSGDTFTDGKVKYALTSMHVPDPVISYSVKCKQSKDMPNFSKALQRFMKEDPTFRVNVDSETKE 395
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: UPI0009E351F9 (elongation factor G, mitochondrial n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E351F9) HSP 1 Score: 259 bits (662), Expect = 3.810e-81 Identity = 129/202 (63.86%), Postives = 160/202 (79.21%), Query Frame = 1 Query: 4 AIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AIRR T++R FVPV++GSAFKNKGVQPLLDGV N+LP P+EVEN ALD+D E +VRLS +P PLVALAFKLEE FGQLTY+R+Y+G +K+G N++ K +VPRL R+HS+E+ED+ EA AG+IVA FG++CASGDTFTDG+ + MTSM PEPV+S A+ P S S FSKAL RFQ+EDPTFRV +DPES + Sbjct: 63 AIRRATVSRKFVPVYMGSAFKNKGVQPLLDGVVNFLPCPTEVENHALDQDQSEVKVRLSGNPAGPLVALAFKLEEGRFGQLTYLRIYEGIIKKGDFIININTGKKIKVPRLVRMHSNEMEDIQEAHAGQIVAVFGIDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVSPISKDSGAQFSKALNRFQKEDPTFRVGLDPESGQ 264
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: A0A6M2F465_9ROSI (Tr-type G domain-containing protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2F465_9ROSI) HSP 1 Score: 260 bits (665), Expect = 4.690e-81 Identity = 132/202 (65.35%), Postives = 159/202 (78.71%), Query Frame = 1 Query: 4 AIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AIRR T+A+ FVPVF+GSAFKNKGVQPLLDGV +YLP P+EV N ALD+ DE +V LS PD PLVALAFKLEE FGQLTY+R+Y+G +++G NV+ K ++PRL R+HSDE+ED+ EA AG+IVA FGV+CASGDTFTDG+ K MTSM PEPV+S AI+P S S FSKAL RFQ+EDPTFRV +DPES + Sbjct: 302 AIRRATVAKKFVPVFMGSAFKNKGVQPLLDGVLSYLPCPTEVGNYALDQTKDEEKVVLSGTPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGDFIINVNTGKKIKIPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAIQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQ 503
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: UPI000D631244 (elongation factor G-2, mitochondrial-like isoform X2 n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D631244) HSP 1 Score: 261 bits (668), Expect = 9.560e-81 Identity = 132/203 (65.02%), Postives = 157/203 (77.34%), Query Frame = 1 Query: 1 AAIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AAIRR TIAR F+PVF+GSAFKNKGVQPLLDGV NYLP P EV+N ALD+ E +V+LS P P+VALAFKLEE PFGQLTY+R+Y G LK+G TN++ K +V +L R+HSD +ED+ EA AG+IVA FG++CASGDTFTDG+ K MTSM PEPV+S A+ P S S FSKAL RFQREDPTFRV +DPES + Sbjct: 304 AAIRRATIARKFIPVFMGSAFKNKGVQPLLDGVFNYLPCPLEVDNFALDQSKKEEKVKLSGTPAGPMVALAFKLEERPFGQLTYLRIYDGVLKKGEFITNINTGKKIKVSKLGRMHSDSMEDIQEAHAGQIVAVFGLDCASGDTFTDGSVKYTMTSMNVPEPVVSLAVSPVSKDSGKQFSKALNRFQREDPTFRVGLDPESGQ 506
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: A0A7S0S5R2_9CHLO (Elongation factor G, mitochondrial n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S5R2_9CHLO) HSP 1 Score: 263 bits (673), Expect = 3.240e-80 Identity = 135/203 (66.50%), Postives = 157/203 (77.34%), Query Frame = 1 Query: 1 AAIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AAIRR TIAR+F PVF+GSAFKNKGVQ LLDGV +YLP P EVEN+ALD + DE E+RL+ DP APLV LAFKLEE FGQLTY+R+YQGT+ +G+T N K +VPRL R+HS+E+EDV A+AGEIVA FGV+C SGDTFTDG AMTSM PEPV+S AI PKS FSKAL RFQREDPTF+V +D ES + Sbjct: 338 AAIRRATIARDFAPVFMGSAFKNKGVQLLLDGVVDYLPAPHEVENIALDLNKDEEEMRLTADPKAPLVGLAFKLEEGRFGQLTYLRIYQGTITKGSTIINTASGKKLKVPRLVRMHSEEMEDVGSAKAGEIVALFGVDCKSGDTFTDGKINCAMTSMRVPEPVMSLAISPKSRAETGGFSKALSRFQREDPTFKVRLDEESGQ 540
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: A0A7S3BJU5_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BJU5_9VIRI) HSP 1 Score: 256 bits (654), Expect = 5.280e-80 Identity = 129/202 (63.86%), Postives = 156/202 (77.23%), Query Frame = 1 Query: 4 AIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 A+RR T+A F PVF+GSAFKNKGVQ LLDGV +YLP P++V N ALD DE + L D A LVALAFKLE+ FGQLTYMR+Y GTLK+G TNV + + +VPRL R+HSD++ED+ EA+AG+IVA FGVECASGDTFTDG AM+SM+ P+PV+S A+ PK S FSKALGRFQREDPTFRVH+DP+SN+ Sbjct: 55 AVRRATLALKFTPVFMGSAFKNKGVQLLLDGVLDYLPAPNDVANTALDVAKDEEPLTLPTDASANLVALAFKLEDGKFGQLTYMRLYSGTLKKGDFITNVKSRKRVKVPRLVRMHSDDMEDITEAKAGDIVAIFGVECASGDTFTDGKVDYAMSSMHTPDPVMSLAVSPKDQSSAGNFSKALGRFQREDPTFRVHLDPDSNQ 256
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: A0A7S2NBZ0_9EUKA (Elongation factor G, mitochondrial n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NBZ0_9EUKA) HSP 1 Score: 261 bits (668), Expect = 5.830e-80 Identity = 134/203 (66.01%), Postives = 162/203 (79.80%), Query Frame = 1 Query: 1 AAIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AAIRR TIA NFVPVF+GSAFKNKGV PLL+GV +YLP P+E+ENVALD ADEAEV LS PD PLV LAFKLEE FGQLTYMR+YQGT+ RG T ++ SK RVP+L R+HS+E+E+V+ +AG+IVA FGV+CASG TFTDGT + +MTSM+ P+PV+S A+ PK ++ FSKALGRF +EDPTFRVH D ES + Sbjct: 273 AAIRRQTIALNFVPVFMGSAFKNKGVHPLLNGVIDYLPAPNEIENVALDLKADEAEVTLSSKPDDPLVGLAFKLEEGRFGQLTYMRIYQGTINRGDTIFSMANNSKVRVPKLVRMHSEEMEEVESGQAGDIVAMFGVDCASGVTFTDGTIRQSMTSMFVPDPVVSLALIPKD-RNASNFSKALGRFTKEDPTFRVHTDEESGQ 474
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Match: G7KT52_MEDTR (Elongation factor G, mitochondrial n=6 Tax=IRL clade TaxID=2233839 RepID=G7KT52_MEDTR) HSP 1 Score: 261 bits (666), Expect = 1.630e-79 Identity = 130/202 (64.36%), Postives = 159/202 (78.71%), Query Frame = 1 Query: 4 AIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRDADEAEVRLSPDPDAPLVALAFKLEESPFGQLTYMRVYQGTLKRGATFTNVDRKSKQRVPRLARVHSDELEDVDEARAGEIVATFGVECASGDTFTDGTTKLAMTSMYCPEPVISYAIKPKSTKSVDAFSKALGRFQREDPTFRVHVDPESNE 609 AIRR T+AR F+PVF+GSAFKNKG+QPLLDGV +YLP P EV N ALD+ E +V L +PD PLVALAFKLEES FGQLTY+R+Y+G +++G NV+ K +VPRL R+HS+E+E++DEA AG+IVA FGV+CASGDTFTDG+ K MTSM PEPV+S A++P S S FSKAL RFQREDPTFRV +DPES + Sbjct: 298 AIRRATVARKFIPVFMGSAFKNKGIQPLLDGVLSYLPCPIEVNNYALDQSNKEEKVELPGNPDGPLVALAFKLEESKFGQLTYLRIYEGVIRKGDFIINVNTGKKNKVPRLGRMHSNEMEEIDEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMSVPEPVMSLAVQPVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQ 499 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108731.1836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108731.1836.1 >prot_M-pyrifera_M_contig108731.1836.1 ID=prot_M-pyrifera_M_contig108731.1836.1|Name=mRNA_M-pyrifera_M_contig108731.1836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp AAIRRTTIARNFVPVFLGSAFKNKGVQPLLDGVANYLPNPSEVENVALDRback to top mRNA from alignment at M-pyrifera_M_contig108731:2..610- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108731.1836.1 ID=mRNA_M-pyrifera_M_contig108731.1836.1|Name=mRNA_M-pyrifera_M_contig108731.1836.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108731:2..610- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108731:2..610- >mRNA_M-pyrifera_M_contig108731.1836.1 ID=mRNA_M-pyrifera_M_contig108731.1836.1|Name=mRNA_M-pyrifera_M_contig108731.1836.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig108731:2..610- (Macrocystis pyrifera P11B4 male)back to top |