mRNA_M-pyrifera_M_contig108717.1833.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: UPI00141329FF (dihydrodipicolinate synthase family protein n=1 Tax=Emticicia sp. CRIBPO TaxID=2683258 RepID=UPI00141329FF) HSP 1 Score: 57.0 bits (136), Expect = 5.440e-8 Identity = 29/57 (50.88%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 7 VVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDD 177 +V+ NGRVP+VA+GTFP+ SIE +AAFVK +Y +G+D+V+VI S + +E S++ Sbjct: 64 IVEKVNGRVPIVATGTFPD--SIENQAAFVKEIY-STGIDSVIVITSLLAGEEDSEE 117
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: UPI00191FD6C7 (dihydrodipicolinate synthase family protein n=1 Tax=Chryseolinea sp. Jin1 TaxID=2801331 RepID=UPI00191FD6C7) HSP 1 Score: 57.0 bits (136), Expect = 5.860e-8 Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 RMVVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDD 177 R VVK NG +PVVA+G+F E SIEE+AAF KRMY+ +GV+AV++I S ++ +DD Sbjct: 108 RHVVKQVNGAMPVVATGSFGE--SIEERAAFTKRMYD-TGVNAVILITSHFAKEDENDD 163
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: A0A1P9WW09_9BACT (Dihydrodipicolinate synthase family protein n=1 Tax=Spirosoma montaniterrae TaxID=1178516 RepID=A0A1P9WW09_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 1.940e-7 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 7 VVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDD 177 +V+ NGRVP+VA+GTFP+ S+E +AAFVK +Y +GVD+V+VI S + + S+D Sbjct: 64 IVQKVNGRVPIVATGTFPD--SLENQAAFVKEIY-STGVDSVIVITSLLAGEMDSED 117
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: UPI0003A801C4 (dihydrodipicolinate synthase family protein n=1 Tax=Spirosoma spitsbergense TaxID=431554 RepID=UPI0003A801C4) HSP 1 Score: 55.5 bits (132), Expect = 1.990e-7 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 1 RMVVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSD 174 R VV + GRVPVVA+GTF SIE++A FVKR+Y+ +GV AV+VI SQ+ ++ SD Sbjct: 71 RQVVNRAGGRVPVVATGTFGG--SIEQQADFVKRIYD-TGVQAVIVITSQLASEDESD 125
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: A0A6M1E4X8_9SPHI (Dihydrodipicolinate synthase family protein n=1 Tax=Parapedobacter sp. SGR-10 TaxID=2710879 RepID=A0A6M1E4X8_9SPHI) HSP 1 Score: 55.1 bits (131), Expect = 2.680e-7 Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 7 VVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDD 177 +VK NGRVP+VA+GTF E++IE +A FVK MY +GVDAV+VI + ++ S++ Sbjct: 66 IVKKVNGRVPIVATGTF--EDTIENQAEFVKAMY-ATGVDAVIVITGLLAKEDDSEE 119
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: A0A6M1N8B4_9SPHI (Dihydrodipicolinate synthase family protein n=1 Tax=Sphingobacterium sp. SGG-5 TaxID=2710881 RepID=A0A6M1N8B4_9SPHI) HSP 1 Score: 55.1 bits (131), Expect = 2.710e-7 Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 7 VVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDD 177 +VK NGRVP+VA+GTF E++IE +A FVK MY +GVDAV+VI + ++ S++ Sbjct: 66 IVKHVNGRVPIVATGTF--EDTIENQAQFVKAMY-ATGVDAVIVITGLLAKEDDSEE 119
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: UPI0019D3BD88 (dihydrodipicolinate synthase family protein n=1 Tax=Algoriphagus oliviformis TaxID=2811231 RepID=UPI0019D3BD88) HSP 1 Score: 55.1 bits (131), Expect = 2.830e-7 Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 1 RMVVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSD 174 R VVK NG++PVVA+G+F + +IEEKA F K+MY+ +GVDAV++I S KE D Sbjct: 113 RHVVKQVNGKMPVVATGSFGD--TIEEKAEFAKKMYD-TGVDAVILISSHFADKEEDD 167
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: A0A514ZSP1_9BACT (Dihydrodipicolinate synthase family protein n=1 Tax=Spirosoma sp. KCTC 42546 TaxID=2520506 RepID=A0A514ZSP1_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 3.660e-7 Identity = 28/57 (49.12%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 7 VVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDD 177 +V+ NGRVP+VA+GTFP+ +++ +AAFVK MY +GVD+V+VI S + + S+D Sbjct: 64 IVQKVNGRVPIVATGTFPD--TLDNQAAFVKEMYH-TGVDSVIVITSLLAEETESED 117
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: A0A6L9L713_9BACT (Dihydrodipicolinate synthase family protein n=2 Tax=Spirosoma terrae TaxID=1968276 RepID=A0A6L9L713_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 3.680e-7 Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 7 VVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDD 177 +V+ NGRVPVVA+GTFP+ S+E +AAFVK +Y +G+D+V+VI + + +DD Sbjct: 64 IVQKVNGRVPVVATGTFPD--SLENQAAFVKEIYR-TGIDSVIVITGLLAEETDADD 117
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Match: A0A4R6WIP0_9SPHI (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Sphingobacterium yanglingense TaxID=1437280 RepID=A0A4R6WIP0_9SPHI) HSP 1 Score: 52.8 bits (125), Expect = 1.790e-6 Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1 Query: 22 NGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMCPKEGSDDGT 183 +GRVPVVA+GTF +ESIE +AAFVK +Y +G+ AV+VI S M KE D+ T Sbjct: 71 DGRVPVVATGTF--DESIESQAAFVKEIY-STGIQAVIVITSLMA-KEQDDEAT 120 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108717.1833.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108717.1833.1 >prot_M-pyrifera_M_contig108717.1833.1 ID=prot_M-pyrifera_M_contig108717.1833.1|Name=mRNA_M-pyrifera_M_contig108717.1833.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=61bp MVVKCSNGRVPVVASGTFPEEESIEEKAAFVKRMYEGSGVDAVVVIVSQMback to top mRNA from alignment at M-pyrifera_M_contig108717:191..445- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108717.1833.1 ID=mRNA_M-pyrifera_M_contig108717.1833.1|Name=mRNA_M-pyrifera_M_contig108717.1833.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig108717:191..445- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108717:191..445- >mRNA_M-pyrifera_M_contig108717.1833.1 ID=mRNA_M-pyrifera_M_contig108717.1833.1|Name=mRNA_M-pyrifera_M_contig108717.1833.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=366bp|location=Sequence derived from alignment at M-pyrifera_M_contig108717:191..445- (Macrocystis pyrifera P11B4 male)back to top |