mRNA_M-pyrifera_M_contig108713.1832.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: I0YLT0_COCSC (Alpha/beta-hydrolase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLT0_COCSC) HSP 1 Score: 82.4 bits (202), Expect = 4.910e-16 Identity = 53/156 (33.97%), Postives = 71/156 (45.51%), Query Frame = 1 Query: 10 IAAVPCLAPYCASRVFCEGVLRDWCDWKAL-------DAAIPDKAEGASSEAYLRQFLAN---------CTDLRRFPLPQLPSAVIQVAARYDQYIPGTG-DALHGHWKGSELRWIPHGHITGYLFGISDFISATVDAFTALVHHKKAARDCSKSS 426 +A VP LAP A+ FC G LR+ W+ L D P S E Q LA TD+ RFP P+ P A + V A D Y+ L HW GS++RW+P GH++ +L F A +DA L AA+D + S+ Sbjct: 142 LACVPLLAPRSAAVAFCHGALREATAWQPLLAAADEADKVCPSVFPSQSHETVAAQKLARERLDKVLETYTDVTRFPRPRRPDAAVIVGAHNDAYVSAHSVRELAAHWPGSQVRWVPGGHVSAFLLQQPAFRQAILDALERLSEPAAAAQDSASSA 297
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: A0A2D9TBX9_9DELT (Uncharacterized protein n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TBX9_9DELT) HSP 1 Score: 73.6 bits (179), Expect = 1.750e-12 Identity = 47/128 (36.72%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 10 IAAVPCLAPYCASRVFCEGVLRDWCDWKALDAAIPDKAEGASSEAYLRQFLANCTDLR--RFPLPQLPSAVIQVAARYDQYIPGT-GDALHGHWKGSELRWIPHGHITGYLFGISDFISATVDAFTAL 384 +A P A A +F +G L + W L AE S EA +F A ++R RF P +P A + VA+ D ++P +ALH HW GSELRW+P GH TG + +A VDA L Sbjct: 357 VAVAPRGAALSAEPIFTDGALMNAMRWDVL------AAEAGSFEAARARFAAALGEVRIDRFGPPAVPEAAVLVASEDDGFVPAEEAEALHRHWPGSELRWVPAGHFTGLVLHHHVHRAAVVDAMARL 478
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: A0A7Y3MFV5_9ACTN (Alpha/beta hydrolase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3MFV5_9ACTN) HSP 1 Score: 63.2 bits (152), Expect = 3.500e-10 Identity = 41/92 (44.57%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 52 VFCEGVLRDWCDWKALDAAIPDKAEGASSEAYLRQFLANCTDLRRFPLPQLPSAVIQVAARYDQYIPGTG-DALHGHWKGSELRWIPHGHIT 324 V+ +G+L DW AL ++ GA E LR+ L + + L P P +AVI V AR D YIP ALH HW GSELRW+P GH T Sbjct: 7 VWLDGILTHMVDWDALGG----RSNGA--EDRLRRHLTSASVLAVPPRPHTATAVI-VGARRDGYIPPAAVKALHEHWPGSELRWLPGGHAT 91
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: E1ZT60_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZT60_CHLVA) HSP 1 Score: 65.9 bits (159), Expect = 4.270e-10 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 1 Query: 142 AYLRQFLANCTDLRRFPLPQLPSAVIQVAARYDQYI-PGTGDALHGHWKGSELRWIPHGHITGYLFGISDFISATVDAFTAL 384 A L + L TD+ RFP PQ P AV+ V A++D Y+ P + L H GSE+RW+P GH+T +L F A D+ L Sbjct: 163 AALHEVLETYTDVTRFPRPQRPDAVVIVGAQHDAYVSPQSVLELQQHLTGSEVRWVPGGHVTSFLLHHGSFRRAIADSLAKL 244
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: A0A520XYL9_9ACTN (Abhydrolase domain-containing 18 n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A520XYL9_9ACTN) HSP 1 Score: 63.5 bits (153), Expect = 4.150e-9 Identity = 43/109 (39.45%), Postives = 56/109 (51.38%), Query Frame = 1 Query: 1 EEEIAAVPCLAPYCASRVFCEGVLRDWCDWKALDAAIPDKAEGASSEAYLRQFLANCTDLRRFPLPQLPSAVIQVAARYDQYIPGTG-DALHGHWKGSELRWIPHGHIT 324 E +A A + V+ +G+L DW AL ++ GA E LR+ L + + L P P +AVI V AR D YIP +ALH HW GS LRW+P GH T Sbjct: 195 ETPVAIAGLAASHSPGPVWLDGILTHMVDWDALGG----RSNGA--EDRLRRHLTSASVLAVPPRPHTATAVI-VGARRDGYIPPAAVEALHEHWPGSGLRWLPGGHAT 296
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: A0A8J9S8W2_9CHLO (Protein ABHD18 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S8W2_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 1.040e-8 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 1 Query: 148 LRQFLANCTDLRRFPLPQLPSAVIQVAARYDQYI-PGTGDALHGHWKGSELRWIPHGHITGYLFGISDFISATVDAFTAL 384 L + L TD+ RFP PQ P A + V A D Y+ P + L HW GS++RW+P GH++ +L F A +D+ L Sbjct: 441 LDKVLETYTDVTRFPRPQRPDAAVIVGAHNDAYVSPHSVRELAAHWPGSQVRWVPGGHVSAFLLQQPAFRKAILDSLERL 520
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: A0A2P6VRY8_9CHLO (Uncharacterized protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRY8_9CHLO) HSP 1 Score: 59.7 bits (143), Expect = 1.340e-7 Identity = 33/82 (40.24%), Postives = 42/82 (51.22%), Query Frame = 1 Query: 142 AYLRQFLANCTDLRRFPLPQLPSAVIQVAARYDQYI-PGTGDALHGHWKGSELRWIPHGHITGYLFGISDFISATVDAFTAL 384 A L L TD+ RFP PQ A + V A D Y+ P + L H GSE+RW+P GH+T +L F A VD+ L Sbjct: 552 ARLHAVLETYTDVTRFPKPQRTDAAVIVGALQDAYVSPQSVLELQQHLTGSEVRWVPGGHVTSFLLHHGSFRQAIVDSLVKL 633
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: A0A2P6TEX0_CHLSO (Alpha beta-isoform A n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TEX0_CHLSO) HSP 1 Score: 59.3 bits (142), Expect = 1.840e-7 Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 1 Query: 142 AYLRQFLANCTDLRRFPLPQLPSAVIQVAARYDQYI-PGTGDALHGHWKGSELRWIPHGHITGYLFGISDFISATVDAFTALVHHKKAARDCSKS 423 A L L TD+ RFP P+ A + V A+ D Y+ P + L H GSE+RW+P GH+T +L F A VD+ L A ++S Sbjct: 413 ARLHAVLETYTDVTRFPKPRRTDAAVIVGAQQDAYVSPQSILELQQHLAGSEVRWVPGGHVTSFLLHHRSFRQAIVDSLAKLAQPPPLATTAAQS 507
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: S4YFM2_SORCE (Uncharacterized protein n=4 Tax=Sorangium cellulosum TaxID=56 RepID=S4YFM2_SORCE) HSP 1 Score: 58.5 bits (140), Expect = 2.600e-7 Identity = 38/115 (33.04%), Postives = 52/115 (45.22%), Query Frame = 1 Query: 43 ASRVFCEGVLRDWCDWKALDAAIPDKAEGASSEAYLRQFLANCTDLRRFPLPQLPSAVIQVAARYDQYIPGTG-DALHGHWKGSELRWIPHGHITGYLFGISDFISATVDAFTAL 384 A VF EG+L +++AL +A + L DL R P P+ P A + V R D Y+ +ALH HW+ SELRW+ GH ++ A VDA L Sbjct: 222 AVPVFTEGMLSVSVEFEALGGPAAARARLGA--------LFGAADLDRHPAPRRPDATVLVGGRRDGYVFAEQVEALHAHWRSSELRWLDTGHAGAIVYRAEALRRAAVDAMARL 328
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Match: M2X589_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X589_GALSU) HSP 1 Score: 56.2 bits (134), Expect = 1.680e-6 Identity = 27/68 (39.71%), Postives = 38/68 (55.88%), Query Frame = 1 Query: 172 TDLRRFPLPQLPSAVIQVAARYDQYIPGTGDALHGH-WKGSELRWIPHGHITGYLFGISDFISATVDA 372 +D+R FP P P+A I +A D+YIP + W E+RWIP GH+TG+LF A +D+ Sbjct: 257 SDIRHFPQPANPNAAILLAGENDKYIPRECVEMFSKAWPHMEIRWIPSGHVTGFLFYRQHIFQAILDS 324 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108713.1832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108713.1832.1 >prot_M-pyrifera_M_contig108713.1832.1 ID=prot_M-pyrifera_M_contig108713.1832.1|Name=mRNA_M-pyrifera_M_contig108713.1832.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp EEEIAAVPCLAPYCASRVFCEGVLRDWCDWKALDAAIPDKAEGASSEAYLback to top mRNA from alignment at M-pyrifera_M_contig108713:147..578- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108713.1832.1 ID=mRNA_M-pyrifera_M_contig108713.1832.1|Name=mRNA_M-pyrifera_M_contig108713.1832.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig108713:147..578- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108713:147..578- >mRNA_M-pyrifera_M_contig108713.1832.1 ID=mRNA_M-pyrifera_M_contig108713.1832.1|Name=mRNA_M-pyrifera_M_contig108713.1832.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig108713:147..578- (Macrocystis pyrifera P11B4 male)back to top |