mRNA_M-pyrifera_M_contig108712.1831.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: A0A2P6MY71_9EUKA (ABC transporter domain-containing protein n=2 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MY71_9EUKA) HSP 1 Score: 100 bits (250), Expect = 2.970e-22 Identity = 56/126 (44.44%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMS--DDHHKSHDFILSIFPTAVQDMDSSMSGLLCYRIPQNTELDLVGLFTAM-KDRAVYGIKEWSIQQTTLEEVFLKVFEFEEA 369 HNMEEADVL +RI I++RG L+CIGSQ LK+++G G+ + + D ++ ++LS+FPTA +D+ G + + IP T++D+ LF+ M K++ GI EW + Q +LEEVF+KV E +EA Sbjct: 779 HNMEEADVLSSRIAIVSRGNLVCIGSQMDLKRQYGRGYKLSISPRLDCSERAKAYVLSLFPTAT--VDTISVGTINFYIP-TTDVDVSSLFSEMMKNKDENGIIEWGVSQASLEEVFIKVVEKDEA 901
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: UPI000644E530 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E530) HSP 1 Score: 94.7 bits (234), Expect = 4.220e-20 Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMSDDHHKSHD---FILSIFPTAVQDMDSSMSGLLCYRIPQNTELDLVGLFTAM-KDRAVYGIKEWSIQQTTLEEVFLKV 351 H+MEEADVL RIGIM++G+L C+G Q HLK KFG G+++++ H +D I P A+ + S SG YR+P++T + LFT M +++ + EW IQQT+LE+VFLK+ Sbjct: 694 HSMEEADVLSTRIGIMSQGKLQCVGPQQHLKSKFGEGYSLKLNVHPSHPEYDPTSLIQKFAPEAI--LIESFSGSFVYRLPKDTLIS--DLFTFMLQNKETNHVTEWGIQQTSLEDVFLKI 810
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: A0A151ZB71_9MYCE (ABC transporter A family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZB71_9MYCE) HSP 1 Score: 93.6 bits (231), Expect = 1.080e-19 Identity = 49/122 (40.16%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMSDDHHKSHDFILSIFPTAV--QDMDSSMSGLLCYRIPQNTELDLVGLFTAMKD-RAVYGIKEWSIQQTTLEEVFLKVFE 357 HNM+EADVLCN+I I+A G+L C+GS +LK KFG G+TV ++ + + I +I Q + S + G L + IP++ ++ + LF + + + +GIKEW I QT+LE+VF+++ E Sbjct: 741 HNMQEADVLCNKIAIVAAGRLQCVGSPLYLKNKFGAGYTVHIVPESQAHAAGIIENIKGAYANCQQVTSEVDGALAFVIPKSEDITI--LFRMISENKQSFGIKEWGISQTSLEDVFMRIAE 860
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: ABCA7_DICDI (ABC transporter A family member 7 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ABCA7_DICDI) HSP 1 Score: 93.2 bits (230), Expect = 1.460e-19 Identity = 49/122 (40.16%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQV-MSDDHHKSH---DFILSIFPTAVQDMDSSMSGLLCYRIPQNTEL-DLVGLFTAMKDRAVYGIKEWSIQQTTLEEVFLKV 351 H+M+EAD+L +RI I+++G+L CIG+Q HLK+KFG G++V++ + +D+ +H D I S P+A + + +G YR+P+++ + DL K++ Y ++EWS+ QT+LE+VFLK+ Sbjct: 714 HSMQEADILSDRIAIVSQGKLQCIGTQTHLKQKFGDGYSVRIDIQEDYQNTHNPTDLIKSFSPSAT--LSETFNGSYVYRLPKDSIISDLYEYLVLNKEQ--YHLQEWSLSQTSLEDVFLKI 831
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: D3BDQ3_POLPP (ABC transporter A family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BDQ3_POLPP) HSP 1 Score: 93.2 bits (230), Expect = 1.470e-19 Identity = 51/128 (39.84%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMS-DDHHKSH--DFILSIFPTAVQDMDSSMSGLLCYRIPQNTELDLVGLFTAMKDRAVYGIKEWSIQQTTLEEVFLKVFEFEEAAT 375 HNMEEADVL N+I I+A G+L C+GS +LK ++G GF +Q++ ++ +S F+L +P A+Q S+S L + IP+++++ + K++ GIKEW + QT+LE++F+K+ E EEA + Sbjct: 752 HNMEEADVLSNKIAIIASGRLQCVGSPIYLKNRYGNGFKLQIVPLNEGFRSSLIKFVLDNYPMAMQ--QESVSDELIFLIPKDSDISTI-FDIISKNKHELGIKEWGVSQTSLEDIFMKMVEREEATS 876
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: A0A507FCS2_9FUNG (ABC transporter domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FCS2_9FUNG) HSP 1 Score: 93.2 bits (230), Expect = 1.490e-19 Identity = 47/129 (36.43%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMS--DDHHKSHDFILSIFPTAVQDMDSSMSGLLCYRIPQNTELDLVGLFTAMK-DRAVYGIKEWSIQQTTLEEVFLKVFEFEEAATD 378 H+MEEA+ LC RIGIMA+G + C+G LK+ +G+GF + +S +D ++ +F+ S+ P + MD+ + Y P + + +F ++ ++A +G+ +WSI QTTLEEVF+K+ ++A D Sbjct: 903 HSMEEAEALCTRIGIMAKGSMRCLGKPLRLKELYGSGFKLSFISKEEDTARASEFVESVMPLGWRKMDAFATST-AYEFPSSERAKIPAMFKKIEAEKADHGVLQWSISQTTLEEVFVKIISGDDANAD 1030
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: A0A7S4I531_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I531_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 1.790e-19 Identity = 48/120 (40.00%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMSDDHHKSH--DFILSIFPTAVQDMDSSMSGLLCYRIPQNTELDLVGLFTAMK-DRAVYGIKEWSIQQTTLEEVFLKV 351 H+MEEAD+LC+RIGIM+RG+L+CIG+Q HLK KFG G+T+ V + ++ +FI ++ P A + + +G Y++ + +L + LF M+ ++ G+ +W I QTT+E+VF+++ Sbjct: 307 HSMEEADILCSRIGIMSRGRLMCIGTQLHLKNKFGEGYTLHVNFTERNEQSVLNFISNLLPGAT--LMENFAGNCIYQLKKQ-DLTISELFEEMESNKKRVGVVDWGITQTTMEDVFIRI 423
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: D3BDQ6_POLPP (ABC transporter A family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BDQ6_POLPP) HSP 1 Score: 92.8 bits (229), Expect = 1.980e-19 Identity = 51/126 (40.48%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMS-DDHHKSH--DFILSIFPTAVQDMDSSMSGLLCYRIPQNTELDLVGLFTAMKDRAVYGIKEWSIQQTTLEEVFLKVFEFEEA 369 HNMEEADVL N+I I+A G+L C+GS +LK ++G GF +Q++ ++ +S F+L +P A+Q S+S L + IP+++++ + K++ GIKEW + QT+LEE+F+K+ E EE+ Sbjct: 666 HNMEEADVLSNKIAIIASGRLQCVGSPIYLKNRYGNGFKLQIVPLNEGFRSSLIKFVLDNYPMAMQ--QESVSDELIFLIPKDSDISTI-FDIISKNKHELGIKEWGVSQTSLEEIFMKMVEREES 788
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: UPI000644CFD5 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CFD5) HSP 1 Score: 92.4 bits (228), Expect = 2.720e-19 Identity = 53/126 (42.06%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVM--SDDHHKS--HDFILSIFPTAVQDMDSSMSGLLCYRIPQNTELDLVGLFTAMKDRAVY-GIKEWSIQQTTLEEVFLKVFEFE 363 HNMEEADVLCN+I I+A G+L CIGS +LK +FG GF ++V+ +D + +S H ++S +PTA+ + ++ L + IP+ D+ +F + + V G+KEW + QT+LEE+F+K+ E E Sbjct: 727 HNMEEADVLCNKIAIVASGRLQCIGSPLYLKNRFGNGFKLEVVPVADQYRESIVHT-VMSTYPTAIT--EEAVGQELIFLIPKQE--DIGRIFEVIANNKVQMGVKEWGVSQTSLEEIFMKMVENE 847
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Match: D3BE51_POLPP (ABC transporter A family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BE51_POLPP) HSP 1 Score: 91.7 bits (226), Expect = 5.060e-19 Identity = 55/125 (44.00%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 HNMEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMSDDHHKSH-------DFILSIFPTAVQDMDSSMSGLLCYRIPQNTEL-DLVGLFTAMKDRAVYGIKEWSIQQTTLEEVFLKV 351 H+MEEADVL RIGI+++G+L CIG Q HLK KFG G+++++ + H SH + I P A+ + S SG YR+P+ T + +L KD+ Y I EW IQQT+LE+VFLK+ Sbjct: 712 HSMEEADVLSTRIGIISQGKLQCIGPQQHLKSKFGEGYSLKI---NIHPSHVDDFQPTELIHKFSPDAL--LIESFSGSYVYRLPKETLISELCAFMLQSKDK--YHITEWGIQQTSLEDVFLKI 829 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108712.1831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108712.1831.1 >prot_M-pyrifera_M_contig108712.1831.1 ID=prot_M-pyrifera_M_contig108712.1831.1|Name=mRNA_M-pyrifera_M_contig108712.1831.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp MEEADVLCNRIGIMARGQLICIGSQAHLKKKFGTGFTVQVMSDDHHKSHDback to top mRNA from alignment at M-pyrifera_M_contig108712:87..467- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108712.1831.1 ID=mRNA_M-pyrifera_M_contig108712.1831.1|Name=mRNA_M-pyrifera_M_contig108712.1831.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=381bp|location=Sequence derived from alignment at M-pyrifera_M_contig108712:87..467- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108712:87..467- >mRNA_M-pyrifera_M_contig108712.1831.1 ID=mRNA_M-pyrifera_M_contig108712.1831.1|Name=mRNA_M-pyrifera_M_contig108712.1831.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig108712:87..467- (Macrocystis pyrifera P11B4 male)back to top |