mRNA_M-pyrifera_M_contig108651.1826.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A9VDX2_MONBE (Alpha-L-fucosidase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VDX2_MONBE) HSP 1 Score: 102 bits (254), Expect = 3.190e-22 Identity = 56/152 (36.84%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 55 LPIPSKEQLEQMDKPFSLFLHFSIATFTGRDDPC-DPSCPHASLFAPKEA-------INTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRWSGDVVGSMYASARKFGLGACLYFDLADAYHEGRGENASANLARQVSFLKE 486 +P PS QLE MD + F+HFS+ TF + C D SC AS+F P TD W +TAV MGA E+CLTAHH GF +W +N ++Y V +S + D+V AS K+ + C Y G NA+ + +++ E Sbjct: 116 IPRPSVRQLEYMDMGLTQFMHFSVTTFGNIEHDCVDGSCLPASIFNPTAMGPDENGLTATDQWVQTAVDMGAGEICLTAHHEGGFCLWPSNYSNYTVMQSPYPHDIVADFVASCHKYNIRPCFYI----------GPNANGYFTQVLNYTAE 257
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: F2U618_SALR5 (Alpha-L-fucosidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U618_SALR5) HSP 1 Score: 97.8 bits (242), Expect = 1.350e-20 Identity = 58/166 (34.94%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 37 YTMAIDLPIPSKEQLEQMDKPFSLFLHFSIATFTGRDDPC-DPSCPHASLFAPKEA-------INTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRWSGDVVGSMYASARKFGLGACLYFDL-ADAYH-EGRGENASANLARQVSFLKELLTERG 504 Y +P PSK Q E MD + F+HFS+ TF + C D SC SLF P TD W + A AMGA E+CLTAHH GF +W + ++Y V +S D+V + S RK+ + C Y A+ Y + + Q+ ++E+LT+ G Sbjct: 131 YEPPATIPRPSKRQQEYMDMGLTQFMHFSVTTFGNIEHDCVDGSCLPPSLFNPTHMGPDAHGITATDQWVQAAKAMGAGEICLTAHHEGGFCLWPSKFSNYTVMQSPHKHDIVEAFVKSCRKYDVRPCFYIGPNANGYFTQVLNYTTEQFVTAQLGMIREVLTKYG 296
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A7W8E1G9_9BACT (Alpha-L-fucosidase n=1 Tax=Granulicella aggregans TaxID=474949 RepID=A0A7W8E1G9_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 1.720e-15 Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 61 IPSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRW---SGDVVGSMYASARKFGLGACLYFDLADAYHEGR--GENASANLARQVSFL-KELLTE 498 +PS +Q+ D +F+HF+ T+ +D D S+ PK ++TD WA TAVA+GA + A H GF MW+T+ TDY ++ + W GDV+ + AS RKFGL +Y D + + G A+ L ++ + + +E LTE Sbjct: 35 LPSPDQIAWQDLEVGMFVHFAPNTW--QDVESDNLSTPLSVIDPKH-LDTDQWARTAVALGAKYIVFVAKHQGGFCMWQTHTTDYSIRNTPWRDGKGDVLADVAASCRKFGLKLGVYVCPRDDHFGAKTGGICATPELQQRYNAMYREQLTE 183
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A3P1T2S7_9ACTN (Alpha-L-fucosidase n=1 Tax=Arachnia propionica TaxID=1750 RepID=A0A3P1T2S7_9ACTN) HSP 1 Score: 82.0 bits (201), Expect = 3.480e-15 Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 43 MAIDLPIPSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRW---SGDVVGSMYASARKFGLGACLYFDLADAYHEGRGENASANLARQVSFLKELLTERGE 507 M + P+P+ +QL +FLHF I TF G + D + P A F P A++ D WAETA A+GA LTA H GF +W+T+ T Y V S W GDVV + R+ G+ LY D + G +A+A V L EL T G+ Sbjct: 1 MTDNHPMPTPQQLAWQRMRLGVFLHFGINTFFGAEW-SDGTLP-AEAFDPS-ALDADQWAETAQAIGARYAVLTAKHHDGFCLWQTDTTSYSVASSPWRDGKGDVVEEFVTAFRRRGIAVGLYLSPWDR-NAGCYPDAAAYDEFYVRQLTELCTRYGD 154
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A851GG45_9BACT (Alpha-L-fucosidase n=1 Tax=Oceaniferula marina TaxID=2748318 RepID=A0A851GG45_9BACT) HSP 1 Score: 78.6 bits (192), Expect = 6.630e-14 Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 64 PSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRWSGDVVGSMYASARKFGLGACLYFDLADA-YHEGRGENASANLARQVSF---------LKELLTERGE 507 P+ Q + +++ + +F+HF I T++G++ P ++ P E ++TD WA+TA G + + L H GF +W + T Y V S DVV SM AS +K+GL LY+ L D + G + A L Q S L ELLT GE Sbjct: 31 PNAYQKQMINRSYGMFIHFGINTYSGKEWTDGTLSP--DIYQP-EKLDTDQWAKTAKDAGMTYVILVTKHHEGFCLWDSKHTTYDVASSSVKTDVVKSMAASCKKYGLNLGLYYSLWDRNWGNGVMRSNRATLTPQQSDDYVTYMNSQLTELLTRYGE 185
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A1I6LEF9_9BACT (Alpha-L-fucosidase n=1 Tax=Granulicella pectinivorans TaxID=474950 RepID=A0A1I6LEF9_9BACT) HSP 1 Score: 78.6 bits (192), Expect = 6.970e-14 Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 37 YTMAIDLPIPSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRWS---GDVVGSMYASARKFGLGACLY 402 + A L PSK+Q+ D +F+HF+ T+ + D S P +++ K ++TD WA TA+ +GA + A H GF MW+T+ TDYG++ + W GDV+ + AS K+GL +Y Sbjct: 26 FAAAPVLARPSKQQIAWADLEIGMFVHFAPNTWQDLESD-DLSTPLSAINPVK--LDTDQWARTALELGAKYIVFVAKHQGGFCMWQTHTTDYGIRNTPWKDGKGDVLAEVRASCDKYGLKLGVY 147
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A7W5NUT6_9GAMM (Alpha-L-fucosidase n=6 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7W5NUT6_9GAMM) HSP 1 Score: 78.2 bits (191), Expect = 9.230e-14 Identity = 56/156 (35.90%), Postives = 73/156 (46.79%), Query Frame = 1 Query: 46 AIDLPIPSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRW---SGDVVGSMYASARKFGLGACLYFDLADAYHEGRGENASANLARQVSFLKELLTERG 504 A P PS QL + S+F+HF++ TFTGR+ P ++F PK A++ WA TA A G M LTA H GF +W T T + V S W GD+V + R GLG Y D GE + + + L ELLT G Sbjct: 46 AAPRPRPSAAQLAWQREELSMFVHFTVNTFTGREWGDGSESP--AIFDPK-ALDARQWARTAKASGFRSMILTAKHHDGFCLWPTKTTTHSVASSPWRGGKGDLVREFTDACRAEGLGVGFYLSPWDRNARVYGEGKAYD-DFYIQQLTELLTGYG 197
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A2L0SHW2_9GAMM (Alpha-L-fucosidase n=1 Tax=Stenotrophomonas acidaminiphila TaxID=128780 RepID=A0A2L0SHW2_9GAMM) HSP 1 Score: 77.0 bits (188), Expect = 2.330e-13 Identity = 58/156 (37.18%), Postives = 72/156 (46.15%), Query Frame = 1 Query: 58 PIPSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRW---SGDVVGSMYASARKFGLGACLYFDLAD----AYHEGRGENASANLARQVSFLKELLTERG 504 P P QL + S+F+HFSI TFTGR+ P LFAP A++ WA TA A G M LTA H GF +W T T + V S W +GD+V + R GLG Y D Y +GR + + L ELLT G Sbjct: 47 PRPDAAQLAWQREELSMFVHFSINTFTGREWGDGRESPR--LFAPA-ALDARQWARTARACGFGSMILTAKHHDGFCLWPTATTAHSVASSPWRGGNGDLVREFTDACRAEGLGVGFYLSPWDRNAAVYGQGRAYDDF-----YIEQLSELLTGYG 194
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A6N7K5S0_9GAMM (Alpha-L-fucosidase n=1 Tax=Stenotrophomonas sp. MYb238 TaxID=2040281 RepID=A0A6N7K5S0_9GAMM) HSP 1 Score: 75.9 bits (185), Expect = 5.880e-13 Identity = 56/156 (35.90%), Postives = 72/156 (46.15%), Query Frame = 1 Query: 58 PIPSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRW---SGDVVGSMYASARKFGLGACLYFDLADA----YHEGRGENASANLARQVSFLKELLTERG 504 P PS QL + S+F+HFS+ TFTGR+ P +F P A++ WA TA A G + M LTA H GF +W T T + V S W GD+V + R GLG Y D Y EG+ + + L ELLT G Sbjct: 46 PRPSAAQLAWQREELSMFVHFSVNTFTGREWGDGSESPQ--VFNPT-ALDARQWARTARACGFASMILTAKHHDGFCLWPTKTTAHSVASSPWRGGKGDLVREFTDACRAEGLGVGFYLSPWDRNAAIYGEGKAYDDF-----YIEQLAELLTSYG 193
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Match: A0A7D8BCN4_9BACT (Alpha-L-fucosidase n=1 Tax=Granulicella sp. 5B5 TaxID=1617967 RepID=A0A7D8BCN4_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 6.050e-13 Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 61 IPSKEQLEQMDKPFSLFLHFSIATFTGRDDPCDPSCPHASLFAPKEAINTDNWAETAVAMGASEMCLTAHHGAGFAMWRTNLTDYGVKESRWS---GDVVGSMYASARKFGLGACLYFDLADAYHEGRGENASANL----ARQVSFLKELLTE 498 +PS ++ D +F+HF+ T+ +D D S PK ++TD WA+TAVA+GA + A H GF MW+T T+Y ++ + W GDV+ + AS RK+GL +Y D H G G A+ + +E LTE Sbjct: 36 LPSAKERAWQDLEVGMFVHFAPNTW--QDVESDNLSTPLSEIDPKN-LSTDQWAQTAVALGARYIVFVAKHQGGFCMWQTKTTEYSIRNTPWKDGKGDVLREVEASCRKYGLKLGVYVCPRDD-HFGAGTGGVCKTLELQAKYDAMYREQLTE 184 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108651.1826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108651.1826.1 >prot_M-pyrifera_M_contig108651.1826.1 ID=prot_M-pyrifera_M_contig108651.1826.1|Name=mRNA_M-pyrifera_M_contig108651.1826.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp VWCLVLCIARTTYTMAIDLPIPSKEQLEQMDKPFSLFLHFSIATFTGRDDback to top mRNA from alignment at M-pyrifera_M_contig108651:15..521- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108651.1826.1 ID=mRNA_M-pyrifera_M_contig108651.1826.1|Name=mRNA_M-pyrifera_M_contig108651.1826.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig108651:15..521- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108651:15..521- >mRNA_M-pyrifera_M_contig108651.1826.1 ID=mRNA_M-pyrifera_M_contig108651.1826.1|Name=mRNA_M-pyrifera_M_contig108651.1826.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig108651:15..521- (Macrocystis pyrifera P11B4 male)back to top |