mRNA_M-pyrifera_M_contig108645.1825.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108645.1825.1
Unique NamemRNA_M-pyrifera_M_contig108645.1825.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A354B883_9ACTN (ABC transporter n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B883_9ACTN)

HSP 1 Score: 279 bits (714), Expect = 6.360e-89
Identity = 144/195 (73.85%), Postives = 162/195 (83.08%), Query Frame = 1
Query:   10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            PW++DP    W   V ALR AT RRLP+LI P + PP RRAI VVR LGGA+IAW L GRRKGG +++ADLSRR+R  AETLGPTYIKLGQIISSGEGIFP ELV EF+ CRDQVPAE FHLVR VVE+DLGA LE+VF++F+R PIAAASIAQVHGA L DGTPVVVKVQRP+VD LVH DL+VMAWL+P LVG
Sbjct:   18 PWDLDPATTAWGGDVTALRAATARRLPSLIRPPKVPPIRRAITVVRVLGGALIAWFLVGRRKGGSDSRADLSRRMRHGAETLGPTYIKLGQIISSGEGIFPTELVQEFVACRDQVPAEPFHLVRRVVESDLGASLESVFATFEREPIAAASIAQVHGATLHDGTPVVVKVQRPTVDDLVHKDLKVMAWLSPFLVG 212          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: UPI001AA01CBE (AarF/ABC1/UbiB kinase family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA01CBE)

HSP 1 Score: 254 bits (650), Expect = 3.740e-79
Identity = 133/195 (68.21%), Postives = 149/195 (76.41%), Query Frame = 1
Query:   10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            PW VDP  M WR+ VPA+R   RR LP L+ P R PP RR  RV RH+GGA++ W ++GRR GG  +K DLSRRLR AAE LGPTYIKLGQIISSGEG+FP ELV+EF K RD+VP E F  VR VVE+DLG+ LEAVF  FD  P+AAASIAQVH A LR G  VVVKVQRP +D LVHDDLRVMAWLAP LVG
Sbjct:   33 PWIVDPAEMRWRRAVPAVRWVKRRELPELVRPRRLPPVRRLTRVARHIGGALVGWYVSGRRAGGSASKRDLSRRLRIAAERLGPTYIKLGQIISSGEGLFPEELVSEFQKLRDRVPPESFGDVRAVVESDLGSTLEAVFERFDPEPVAAASIAQVHRARLRTGEDVVVKVQRPGIDRLVHDDLRVMAWLAPFLVG 227          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A7Y1XX81_9ACTN (AarF/ABC1/UbiB kinase family protein n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1XX81_9ACTN)

HSP 1 Score: 251 bits (642), Expect = 5.990e-78
Identity = 133/201 (66.17%), Postives = 149/201 (74.13%), Query Frame = 1
Query:   10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRD------GTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            PW VD D + W   V  +R A  R++P LIAP R P GRR   VVRHLG AV +W LTGRR+GG E+  DLS RLR AAETLGPTYIKLGQIISSG+G+FP ELV EFIKCRDQVP+E F  VR VVE+DLG PLEAVFS FD TP+AAASIAQVH A+L D      G  VVVKVQRP V   VH DLRVMAW+AP ++G
Sbjct:   19 PWLVDLDELEWMDRVDTIRSAIHRQVPDLIAPGRMPAGRRMFDVVRHLGTAVGSWYLTGRRRGGSESTGDLSHRLRVAAETLGPTYIKLGQIISSGQGVFPKELVNEFIKCRDQVPSESFETVRRVVESDLGKPLEAVFSEFDETPLAAASIAQVHRAVLADNGQPGGGGEVVVKVQRPRVAEFVHQDLRVMAWIAPFMIG 219          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A3M2GT31_ACTSX (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GT31_ACTSX)

HSP 1 Score: 237 bits (604), Expect = 5.630e-74
Identity = 128/203 (63.05%), Postives = 148/203 (72.91%), Query Frame = 1
Query:   10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRD--------GTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            PW VDP A+ WR+ VPALR    RRLP+L+ P R PP RR + V   L GAV  W LT RR+GG  ++A +SRRLR AAE LGPT+IKLGQIISSGEGIFP ELVAEF++CRD+VP E F  VR +VE DLG PL AVF  F+ +P+AAASIAQVH A LR         G+ VVVKVQRP+V A V DDLRV+AWLAP LVG
Sbjct:   18 PWTVDPAALAWRRPVPALRAEAHRRLPSLLRPPRLPPVRRGMVVTTRLAGAVAGWMLTERRRGGTVSRAGVSRRLRVAAERLGPTFIKLGQIISSGEGIFPAELVAEFVRCRDRVPPEDFCTVRRIVEEDLGLPLAAVFEEFEESPVAAASIAQVHRARLRRDLPDVAGAGSEVVVKVQRPTVAARVLDDLRVLAWLAPKLVG 220          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A6I3FCP1_9ACTN (AarF/ABC1/UbiB kinase family protein n=2 Tax=root TaxID=1 RepID=A0A6I3FCP1_9ACTN)

HSP 1 Score: 240 bits (612), Expect = 1.440e-73
Identity = 131/197 (66.50%), Postives = 146/197 (74.11%), Query Frame = 1
Query:    4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            D PW VDP+AM WR  V  +R  T+  +P +IAP RWP G RA+ V+R LG AV  WAL GRR    +++ADLSRRLR AAE LGPTYIKLGQIISSGEG+FP  LV EF KCRDQVPAE F +VRE VEADLG  +E VFS FDR P+AAASIAQVH A LR G  VVVKVQR +V  LV  DL VMAWLAP LVG
Sbjct:   25 DPPWIVDPEAMPWRSTVDDIRWLTQHDIPEIIAPRRWPQGFRALTVIRRLGMAVGLWALIGRRS--KDSQADLSRRLRIAAEHLGPTYIKLGQIISSGEGLFPESLVGEFKKCRDQVPAEPFAIVRETVEADLGRSIEEVFSFFDRKPLAAASIAQVHAATLRTGERVVVKVQRTTVAQLVRKDLEVMAWLAPFLVG 219          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A7K1B9K1_9ACTN (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1B9K1_9ACTN)

HSP 1 Score: 238 bits (607), Expect = 8.970e-73
Identity = 128/200 (64.00%), Postives = 146/200 (73.00%), Query Frame = 1
Query:    4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALT---GRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            D+PW +D DA+ W      LRRA R  +P L  PS+ PPG R + VVRHL GAV+ W +    GR      ++AD+SRRLR AAETLGPTYIKLGQIISSGEG+FP ELV+EF  CRDQVPAE F +VR VVE DLG  LE +F SF+RTP+AAASIAQVH A+LR G  VVVKVQRPSV   V  DLRVMAWLAP LVG
Sbjct:   42 DTPWVLDRDAIRWMPLAEGLRRAARAEVPVLTQPSKVPPGARVVTVVRHLAGAVVPWMIAKRRGRYATPEASRADVSRRLRLAAETLGPTYIKLGQIISSGEGLFPAELVSEFKLCRDQVPAEPFDVVRTVVEGDLGGRLEDLFQSFERTPLAAASIAQVHAAVLRTGEEVVVKVQRPSVSQFVRKDLRVMAWLAPHLVG 241          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A6I3A9Z7_9ACTN (AarF/ABC1/UbiB kinase family protein n=2 Tax=root TaxID=1 RepID=A0A6I3A9Z7_9ACTN)

HSP 1 Score: 238 bits (606), Expect = 1.320e-72
Identity = 126/198 (63.64%), Postives = 152/198 (76.77%), Query Frame = 1
Query:    4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEA-KADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            D PW +DPD + WR+ + A+R   +R +P L+ P R+P G R++RVVR +GGA+  WA+  RR     A +A LSRRLREAAETLGPTYIKLGQIISSG+GIFP ELV EF KCRD+V  E +H+VR V+E +L  PLEA F+ FDR P+AAASIAQVH A L DGT VVVKVQRP+V  LVH+DLRVMAWLAP+LVG
Sbjct:   31 DPPWVLDPDRLPWRKPLLAVRSVAQREVPQLVTPRRFP-GWRSVRVVREIGGALGMWAIRERRSDDASASRAGLSRRLREAAETLGPTYIKLGQIISSGQGIFPSELVDEFKKCRDRVTPEPYHVVRAVLEEELRGPLEATFAEFDREPLAAASIAQVHRATLLDGTEVVVKVQRPNVGRLVHEDLRVMAWLAPLLVG 227          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: UPI001E5D081C (AarF/UbiB family protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E5D081C)

HSP 1 Score: 235 bits (600), Expect = 1.010e-71
Identity = 126/197 (63.96%), Postives = 143/197 (72.59%), Query Frame = 1
Query:    4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            D PW VDP+ M WR+ V A+R  TR +LP LI P R P GRR   VVR LG A++ W L  RRKG   ++A LSRRLR AAE LGPTYIKLGQIISSGEG+FP ELV EF KCRDQVP + F  VR ++E D G PLE VF++F+RTP+AAASIAQVH A L  G  VVVKVQR +V   VH DL VMAWLAP LVG
Sbjct:   29 DPPWLVDPEVMPWREAVDAVRWVTRAQLPDLIRPRRLPRGRRVFTVVRRLGTALLPWYLIDRRKGRELSRAGLSRRLRIAAEHLGPTYIKLGQIISSGEGLFPEELVTEFKKCRDQVPPQPFRDVRTIIETDFGRPLEDVFAAFERTPLAAASIAQVHAATLHTGEQVVVKVQRRTVGERVHADLEVMAWLAPFLVG 225          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A6I2ZCA8_9ACTN (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I2ZCA8_9ACTN)

HSP 1 Score: 226 bits (577), Expect = 1.120e-69
Identity = 120/197 (60.91%), Postives = 140/197 (71.07%), Query Frame = 1
Query:    4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            + PW +D   + W  G+  LR  TRR +P L A  R PP  R   V  HLG AVI WA+  RR+GG +++  LS+RLR AAE LGPTYIKLGQ+ISSGEG+FP ELV EF  CRDQVP+E F  VR+VVEAD G PLE VFS F+RTPIAAASIAQVH A L  G  VVVKVQRP++   V  DL+VM+WLAP LVG
Sbjct:   32 NGPWVIDRTELTWTAGIALLRANTRRLVPQLTAKRRLPPPGRLAVVSAHLGAAVIGWAVIDRRRGGSDSRLGLSKRLRSAAEKLGPTYIKLGQVISSGEGLFPTELVEEFKACRDQVPSEPFDAVRQVVEADFGRPLETVFSRFERTPIAAASIAQVHSAQLITGEEVVVKVQRPTIRKQVQSDLKVMSWLAPFLVG 228          
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A7W0QY06_9ACTN (AarF/ABC1/UbiB kinase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0QY06_9ACTN)

HSP 1 Score: 229 bits (585), Expect = 1.880e-69
Identity = 123/197 (62.44%), Postives = 142/197 (72.08%), Query Frame = 1
Query:    4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594
            + PW +DPD + WR+ VPA R      LP L      PPG R +R  R LGG +  W L  RR+GGV ++ DL+ RLR AAE LGPTYIKLGQIISSG+GIFPPELV EF   RD+VP E F +VREVVEA+LG PL  VFS+F+R PIAAASIAQVH A LR G  VVVKVQRP+V+  VH DLRVMAW+AP LVG
Sbjct:   23 EGPWVLDPDDLPWRRSVPAERARIIASLPELTRRRALPPGLRIVRTSRWLGGGIGRWYLGARREGGVPSRTDLAHRLRVAAEGLGPTYIKLGQIISSGQGIFPPELVDEFALLRDRVPPERFAVVREVVEAELGRPLTEVFSNFERRPIAAASIAQVHAATLRTGEEVVVKVQRPTVNERVHADLRVMAWIAPFLVG 219          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A354B883_9ACTN6.360e-8973.85ABC transporter n=6 Tax=Acidimicrobiaceae bacteriu... [more]
UPI001AA01CBE3.740e-7968.21AarF/ABC1/UbiB kinase family protein n=1 Tax=Rhabd... [more]
A0A7Y1XX81_9ACTN5.990e-7866.17AarF/ABC1/UbiB kinase family protein n=2 Tax=Acidi... [more]
A0A3M2GT31_ACTSX5.630e-7463.05AarF/ABC1/UbiB kinase family protein (Fragment) n=... [more]
A0A6I3FCP1_9ACTN1.440e-7366.50AarF/ABC1/UbiB kinase family protein n=2 Tax=root ... [more]
A0A7K1B9K1_9ACTN8.970e-7364.00AarF/ABC1/UbiB kinase family protein (Fragment) n=... [more]
A0A6I3A9Z7_9ACTN1.320e-7263.64AarF/ABC1/UbiB kinase family protein n=2 Tax=root ... [more]
UPI001E5D081C1.010e-7163.96AarF/UbiB family protein n=1 Tax=Rhabdothermincola... [more]
A0A6I2ZCA8_9ACTN1.120e-6960.91AarF/ABC1/UbiB kinase family protein (Fragment) n=... [more]
A0A7W0QY06_9ACTN1.880e-6962.44AarF/ABC1/UbiB kinase family protein n=1 Tax=Acidi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108645contigM-pyrifera_M_contig108645:18..611 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score214.2
Seed ortholog evalue5.7e-53
Seed eggNOG ortholog1229780.BN381_10295
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ABC1 family
EggNOG OGs2GJQ6@201174,3UWVB@52018,COG0661@1,COG0661@2
COG Functional cat.S
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
Exons1
Model size594
Cds size594
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815596.5746636-CDS-M-pyrifera_M_contig108645:17..6111622815596.5746636-CDS-M-pyrifera_M_contig108645:17..611Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108645 18..611 +
1692277480.0794911-CDS-M-pyrifera_M_contig108645:17..6111692277480.0794911-CDS-M-pyrifera_M_contig108645:17..611Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108645 18..611 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108645.1825.1prot_M-pyrifera_M_contig108645.1825.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108645 18..611 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108645.1825.1

>prot_M-pyrifera_M_contig108645.1825.1 ID=prot_M-pyrifera_M_contig108645.1825.1|Name=mRNA_M-pyrifera_M_contig108645.1825.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
SDSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRH
LGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGE
GIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPI
AAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG
back to top

mRNA from alignment at M-pyrifera_M_contig108645:18..611+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108645.1825.1 ID=mRNA_M-pyrifera_M_contig108645.1825.1|Name=mRNA_M-pyrifera_M_contig108645.1825.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig108645:18..611+ (Macrocystis pyrifera P11B4 male)
TCCGACTCCCCCTGGAACGTCGACCCCGACGCCATGCACTGGCGACAGGG CGTACCCGCGCTGCGCCGGGCCACGCGCCGCCGCCTGCCGGCCCTGATCG CGCCCTCCCGGTGGCCCCCGGGTCGACGAGCGATCCGCGTGGTCCGCCAT CTCGGCGGCGCCGTCATCGCCTGGGCGCTCACCGGCCGACGCAAGGGCGG GGTCGAGGCGAAGGCCGACCTGTCACGACGCCTCCGCGAGGCTGCCGAAA CGCTCGGCCCGACCTACATCAAGCTCGGCCAGATCATCTCGAGCGGCGAA GGCATCTTCCCGCCCGAACTCGTGGCCGAGTTCATCAAGTGCCGCGACCA GGTGCCCGCGGAGGGATTCCACCTCGTGCGCGAGGTCGTCGAGGCCGATC TGGGCGCGCCGCTCGAGGCCGTCTTCTCCTCGTTCGACCGCACACCCATC GCGGCAGCGTCGATCGCCCAGGTCCATGGCGCGATCCTGCGAGATGGCAC CCCGGTGGTCGTGAAGGTGCAGCGGCCGTCGGTCGACGCGCTGGTCCACG ACGATCTGCGCGTCATGGCCTGGCTCGCCCCGATGCTGGTCGGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig108645:18..611+

>mRNA_M-pyrifera_M_contig108645.1825.1 ID=mRNA_M-pyrifera_M_contig108645.1825.1|Name=mRNA_M-pyrifera_M_contig108645.1825.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig108645:18..611+ (Macrocystis pyrifera P11B4 male)
TCCGACTCCCCCTGGAACGTCGACCCCGACGCCATGCACTGGCGACAGGG
CGTACCCGCGCTGCGCCGGGCCACGCGCCGCCGCCTGCCGGCCCTGATCG
CGCCCTCCCGGTGGCCCCCGGGTCGACGAGCGATCCGCGTGGTCCGCCAT
CTCGGCGGCGCCGTCATCGCCTGGGCGCTCACCGGCCGACGCAAGGGCGG
GGTCGAGGCGAAGGCCGACCTGTCACGACGCCTCCGCGAGGCTGCCGAAA
CGCTCGGCCCGACCTACATCAAGCTCGGCCAGATCATCTCGAGCGGCGAA
GGCATCTTCCCGCCCGAACTCGTGGCCGAGTTCATCAAGTGCCGCGACCA
GGTGCCCGCGGAGGGATTCCACCTCGTGCGCGAGGTCGTCGAGGCCGATC
TGGGCGCGCCGCTCGAGGCCGTCTTCTCCTCGTTCGACCGCACACCCATC
GCGGCAGCGTCGATCGCCCAGGTCCATGGCGCGATCCTGCGAGATGGCAC
CCCGGTGGTCGTGAAGGTGCAGCGGCCGTCGGTCGACGCGCTGGTCCACG
ACGATCTGCGCGTCATGGCCTGGCTCGCCCCGATGCTGGTCGGTTCCGAC
TCCCCCTGGAACGTCGACCCCGACGCCATGCACTGGCGACAGGGCGTACC
CGCGCTGCGCCGGGCCACGCGCCGCCGCCTGCCGGCCCTGATCGCGCCCT
CCCGGTGGCCCCCGGGTCGACGAGCGATCCGCGTGGTCCGCCATCTCGGC
GGCGCCGTCATCGCCTGGGCGCTCACCGGCCGACGCAAGGGCGGGGTCGA
GGCGAAGGCCGACCTGTCACGACGCCTCCGCGAGGCTGCCGAAACGCTCG
GCCCGACCTACATCAAGCTCGGCCAGATCATCTCGAGCGGCGAAGGCATC
TTCCCGCCCGAACTCGTGGCCGAGTTCATCAAGTGCCGCGACCAGGTGCC
CGCGGAGGGATTCCACCTCGTGCGCGAGGTCGTCGAGGCCGATCTGGGCG
CGCCGCTCGAGGCCGTCTTCTCCTCGTTCGACCGCACACCCATCGCGGCA
GCGTCGATCGCCCAGGTCCATGGCGCGATCCTGCGAGATGGCACCCCGGT
GGTCGTGAAGGTGCAGCGGCCGTCGGTCGACGCGCTGGTCCACGACGATC
TGCGCGTCATGGCCTGGCTCGCCCCGATGCTGGTCGGT
back to top