mRNA_M-pyrifera_M_contig108645.1825.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A354B883_9ACTN (ABC transporter n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B883_9ACTN) HSP 1 Score: 279 bits (714), Expect = 6.360e-89 Identity = 144/195 (73.85%), Postives = 162/195 (83.08%), Query Frame = 1 Query: 10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 PW++DP W V ALR AT RRLP+LI P + PP RRAI VVR LGGA+IAW L GRRKGG +++ADLSRR+R AETLGPTYIKLGQIISSGEGIFP ELV EF+ CRDQVPAE FHLVR VVE+DLGA LE+VF++F+R PIAAASIAQVHGA L DGTPVVVKVQRP+VD LVH DL+VMAWL+P LVG Sbjct: 18 PWDLDPATTAWGGDVTALRAATARRLPSLIRPPKVPPIRRAITVVRVLGGALIAWFLVGRRKGGSDSRADLSRRMRHGAETLGPTYIKLGQIISSGEGIFPTELVQEFVACRDQVPAEPFHLVRRVVESDLGASLESVFATFEREPIAAASIAQVHGATLHDGTPVVVKVQRPTVDDLVHKDLKVMAWLSPFLVG 212
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: UPI001AA01CBE (AarF/ABC1/UbiB kinase family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA01CBE) HSP 1 Score: 254 bits (650), Expect = 3.740e-79 Identity = 133/195 (68.21%), Postives = 149/195 (76.41%), Query Frame = 1 Query: 10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 PW VDP M WR+ VPA+R RR LP L+ P R PP RR RV RH+GGA++ W ++GRR GG +K DLSRRLR AAE LGPTYIKLGQIISSGEG+FP ELV+EF K RD+VP E F VR VVE+DLG+ LEAVF FD P+AAASIAQVH A LR G VVVKVQRP +D LVHDDLRVMAWLAP LVG Sbjct: 33 PWIVDPAEMRWRRAVPAVRWVKRRELPELVRPRRLPPVRRLTRVARHIGGALVGWYVSGRRAGGSASKRDLSRRLRIAAERLGPTYIKLGQIISSGEGLFPEELVSEFQKLRDRVPPESFGDVRAVVESDLGSTLEAVFERFDPEPVAAASIAQVHRARLRTGEDVVVKVQRPGIDRLVHDDLRVMAWLAPFLVG 227
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A7Y1XX81_9ACTN (AarF/ABC1/UbiB kinase family protein n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1XX81_9ACTN) HSP 1 Score: 251 bits (642), Expect = 5.990e-78 Identity = 133/201 (66.17%), Postives = 149/201 (74.13%), Query Frame = 1 Query: 10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRD------GTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 PW VD D + W V +R A R++P LIAP R P GRR VVRHLG AV +W LTGRR+GG E+ DLS RLR AAETLGPTYIKLGQIISSG+G+FP ELV EFIKCRDQVP+E F VR VVE+DLG PLEAVFS FD TP+AAASIAQVH A+L D G VVVKVQRP V VH DLRVMAW+AP ++G Sbjct: 19 PWLVDLDELEWMDRVDTIRSAIHRQVPDLIAPGRMPAGRRMFDVVRHLGTAVGSWYLTGRRRGGSESTGDLSHRLRVAAETLGPTYIKLGQIISSGQGVFPKELVNEFIKCRDQVPSESFETVRRVVESDLGKPLEAVFSEFDETPLAAASIAQVHRAVLADNGQPGGGGEVVVKVQRPRVAEFVHQDLRVMAWIAPFMIG 219
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A3M2GT31_ACTSX (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GT31_ACTSX) HSP 1 Score: 237 bits (604), Expect = 5.630e-74 Identity = 128/203 (63.05%), Postives = 148/203 (72.91%), Query Frame = 1 Query: 10 PWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRD--------GTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 PW VDP A+ WR+ VPALR RRLP+L+ P R PP RR + V L GAV W LT RR+GG ++A +SRRLR AAE LGPT+IKLGQIISSGEGIFP ELVAEF++CRD+VP E F VR +VE DLG PL AVF F+ +P+AAASIAQVH A LR G+ VVVKVQRP+V A V DDLRV+AWLAP LVG Sbjct: 18 PWTVDPAALAWRRPVPALRAEAHRRLPSLLRPPRLPPVRRGMVVTTRLAGAVAGWMLTERRRGGTVSRAGVSRRLRVAAERLGPTFIKLGQIISSGEGIFPAELVAEFVRCRDRVPPEDFCTVRRIVEEDLGLPLAAVFEEFEESPVAAASIAQVHRARLRRDLPDVAGAGSEVVVKVQRPTVAARVLDDLRVLAWLAPKLVG 220
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A6I3FCP1_9ACTN (AarF/ABC1/UbiB kinase family protein n=2 Tax=root TaxID=1 RepID=A0A6I3FCP1_9ACTN) HSP 1 Score: 240 bits (612), Expect = 1.440e-73 Identity = 131/197 (66.50%), Postives = 146/197 (74.11%), Query Frame = 1 Query: 4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 D PW VDP+AM WR V +R T+ +P +IAP RWP G RA+ V+R LG AV WAL GRR +++ADLSRRLR AAE LGPTYIKLGQIISSGEG+FP LV EF KCRDQVPAE F +VRE VEADLG +E VFS FDR P+AAASIAQVH A LR G VVVKVQR +V LV DL VMAWLAP LVG Sbjct: 25 DPPWIVDPEAMPWRSTVDDIRWLTQHDIPEIIAPRRWPQGFRALTVIRRLGMAVGLWALIGRRS--KDSQADLSRRLRIAAEHLGPTYIKLGQIISSGEGLFPESLVGEFKKCRDQVPAEPFAIVRETVEADLGRSIEEVFSFFDRKPLAAASIAQVHAATLRTGERVVVKVQRTTVAQLVRKDLEVMAWLAPFLVG 219
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A7K1B9K1_9ACTN (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1B9K1_9ACTN) HSP 1 Score: 238 bits (607), Expect = 8.970e-73 Identity = 128/200 (64.00%), Postives = 146/200 (73.00%), Query Frame = 1 Query: 4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALT---GRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 D+PW +D DA+ W LRRA R +P L PS+ PPG R + VVRHL GAV+ W + GR ++AD+SRRLR AAETLGPTYIKLGQIISSGEG+FP ELV+EF CRDQVPAE F +VR VVE DLG LE +F SF+RTP+AAASIAQVH A+LR G VVVKVQRPSV V DLRVMAWLAP LVG Sbjct: 42 DTPWVLDRDAIRWMPLAEGLRRAARAEVPVLTQPSKVPPGARVVTVVRHLAGAVVPWMIAKRRGRYATPEASRADVSRRLRLAAETLGPTYIKLGQIISSGEGLFPAELVSEFKLCRDQVPAEPFDVVRTVVEGDLGGRLEDLFQSFERTPLAAASIAQVHAAVLRTGEEVVVKVQRPSVSQFVRKDLRVMAWLAPHLVG 241
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A6I3A9Z7_9ACTN (AarF/ABC1/UbiB kinase family protein n=2 Tax=root TaxID=1 RepID=A0A6I3A9Z7_9ACTN) HSP 1 Score: 238 bits (606), Expect = 1.320e-72 Identity = 126/198 (63.64%), Postives = 152/198 (76.77%), Query Frame = 1 Query: 4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEA-KADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 D PW +DPD + WR+ + A+R +R +P L+ P R+P G R++RVVR +GGA+ WA+ RR A +A LSRRLREAAETLGPTYIKLGQIISSG+GIFP ELV EF KCRD+V E +H+VR V+E +L PLEA F+ FDR P+AAASIAQVH A L DGT VVVKVQRP+V LVH+DLRVMAWLAP+LVG Sbjct: 31 DPPWVLDPDRLPWRKPLLAVRSVAQREVPQLVTPRRFP-GWRSVRVVREIGGALGMWAIRERRSDDASASRAGLSRRLREAAETLGPTYIKLGQIISSGQGIFPSELVDEFKKCRDRVTPEPYHVVRAVLEEELRGPLEATFAEFDREPLAAASIAQVHRATLLDGTEVVVKVQRPNVGRLVHEDLRVMAWLAPLLVG 227
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: UPI001E5D081C (AarF/UbiB family protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E5D081C) HSP 1 Score: 235 bits (600), Expect = 1.010e-71 Identity = 126/197 (63.96%), Postives = 143/197 (72.59%), Query Frame = 1 Query: 4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 D PW VDP+ M WR+ V A+R TR +LP LI P R P GRR VVR LG A++ W L RRKG ++A LSRRLR AAE LGPTYIKLGQIISSGEG+FP ELV EF KCRDQVP + F VR ++E D G PLE VF++F+RTP+AAASIAQVH A L G VVVKVQR +V VH DL VMAWLAP LVG Sbjct: 29 DPPWLVDPEVMPWREAVDAVRWVTRAQLPDLIRPRRLPRGRRVFTVVRRLGTALLPWYLIDRRKGRELSRAGLSRRLRIAAEHLGPTYIKLGQIISSGEGLFPEELVTEFKKCRDQVPPQPFRDVRTIIETDFGRPLEDVFAAFERTPLAAASIAQVHAATLHTGEQVVVKVQRRTVGERVHADLEVMAWLAPFLVG 225
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A6I2ZCA8_9ACTN (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I2ZCA8_9ACTN) HSP 1 Score: 226 bits (577), Expect = 1.120e-69 Identity = 120/197 (60.91%), Postives = 140/197 (71.07%), Query Frame = 1 Query: 4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 + PW +D + W G+ LR TRR +P L A R PP R V HLG AVI WA+ RR+GG +++ LS+RLR AAE LGPTYIKLGQ+ISSGEG+FP ELV EF CRDQVP+E F VR+VVEAD G PLE VFS F+RTPIAAASIAQVH A L G VVVKVQRP++ V DL+VM+WLAP LVG Sbjct: 32 NGPWVIDRTELTWTAGIALLRANTRRLVPQLTAKRRLPPPGRLAVVSAHLGAAVIGWAVIDRRRGGSDSRLGLSKRLRSAAEKLGPTYIKLGQVISSGEGLFPTELVEEFKACRDQVPSEPFDAVRQVVEADFGRPLETVFSRFERTPIAAASIAQVHSAQLITGEEVVVKVQRPTIRKQVQSDLKVMSWLAPFLVG 228
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Match: A0A7W0QY06_9ACTN (AarF/ABC1/UbiB kinase family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0QY06_9ACTN) HSP 1 Score: 229 bits (585), Expect = 1.880e-69 Identity = 123/197 (62.44%), Postives = 142/197 (72.08%), Query Frame = 1 Query: 4 DSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHLGGAVIAWALTGRRKGGVEAKADLSRRLREAAETLGPTYIKLGQIISSGEGIFPPELVAEFIKCRDQVPAEGFHLVREVVEADLGAPLEAVFSSFDRTPIAAASIAQVHGAILRDGTPVVVKVQRPSVDALVHDDLRVMAWLAPMLVG 594 + PW +DPD + WR+ VPA R LP L PPG R +R R LGG + W L RR+GGV ++ DL+ RLR AAE LGPTYIKLGQIISSG+GIFPPELV EF RD+VP E F +VREVVEA+LG PL VFS+F+R PIAAASIAQVH A LR G VVVKVQRP+V+ VH DLRVMAW+AP LVG Sbjct: 23 EGPWVLDPDDLPWRRSVPAERARIIASLPELTRRRALPPGLRIVRTSRWLGGGIGRWYLGARREGGVPSRTDLAHRLRVAAEGLGPTYIKLGQIISSGQGIFPPELVDEFALLRDRVPPERFAVVREVVEAELGRPLTEVFSNFERRPIAAASIAQVHAATLRTGEEVVVKVQRPTVNERVHADLRVMAWIAPFLVG 219 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108645.1825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108645.1825.1 >prot_M-pyrifera_M_contig108645.1825.1 ID=prot_M-pyrifera_M_contig108645.1825.1|Name=mRNA_M-pyrifera_M_contig108645.1825.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp SDSPWNVDPDAMHWRQGVPALRRATRRRLPALIAPSRWPPGRRAIRVVRHback to top mRNA from alignment at M-pyrifera_M_contig108645:18..611+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108645.1825.1 ID=mRNA_M-pyrifera_M_contig108645.1825.1|Name=mRNA_M-pyrifera_M_contig108645.1825.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig108645:18..611+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108645:18..611+ >mRNA_M-pyrifera_M_contig108645.1825.1 ID=mRNA_M-pyrifera_M_contig108645.1825.1|Name=mRNA_M-pyrifera_M_contig108645.1825.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig108645:18..611+ (Macrocystis pyrifera P11B4 male)back to top |