mRNA_M-pyrifera_M_contig108643.1824.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A812ZEJ8_SYMMI (UBCRBP protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZEJ8_SYMMI) HSP 1 Score: 91.7 bits (226), Expect = 4.550e-22 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQREHDER 225 GL YHD++ ++P AI+RLP E+QE R+RRIRRA+DL +KK LPE W DPW+EFD ++ LL TQRE DE+ Sbjct: 20 GLCYHDVMVDSPAYKTAIARLPEEMQEARLRRIRRAVDLNVKKIVLPESQWVDPWREFDTVQNLLEYTQRELDEK 94
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A5A8DRH0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DRH0_CAFRO) HSP 1 Score: 91.7 bits (226), Expect = 5.620e-22 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQREHDER 225 GL YHD++ ++P AI+RLP E+QE R+RRIRRA+DL +KK LPE W DPW+EFD ++ LL TQRE DE+ Sbjct: 28 GLCYHDVMVDSPAYKTAIARLPEEMQEARLRRIRRAVDLNVKKIVLPESQWVDPWREFDTVQNLLEYTQRELDEK 102
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A812KD07_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KD07_9DINO) HSP 1 Score: 93.2 bits (230), Expect = 1.570e-20 Identity = 43/75 (57.33%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQREHDER 225 GL +HD++A+ P+L +A++RLP E+QERR RRIRRA DL +K +YLPE+ W DP+ EFDMM +L+ Q E DER Sbjct: 359 GLMWHDVVADGPILDKAVARLPKEMQERRERRIRRAFDLSLKHKYLPEDKWVDPYAEFDMMDKLMKQVQIEEDER 433
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A0G4IL57_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IL57_PLABS) HSP 1 Score: 60.8 bits (146), Expect = 2.600e-10 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWE-DPWQEFDMMRELLAVTQR 210 GL + DI+ E + AI+RLP +V E R+RRIRRA DL +K +Y+PE + DP++++ ++ EL+ V R Sbjct: 25 GLLFEDILLEREDIQEAIARLPPDVLEARVRRIRRAHDLSLKHEYMPEHLQDYDPFEKYGLIEELVNVRAR 95
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A8B7P442_HYAAZ (Cytochrome b-c1 complex subunit 7 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7P442_HYAAZ) HSP 1 Score: 57.4 bits (137), Expect = 7.590e-9 Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQREHDER 225 GL+ HD+ ETP ++ AI RLPAE Q+ R+ R++RAI L + K+ LP+E W +E R L + ++ ER Sbjct: 33 GLYLHDLYQETPDVSEAIRRLPAEKQDERLWRLQRAIQLDLTKRVLPKEEWHTYEEEISKGRYLTELLKQVEFER 107
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: UPI0004CD4A3E (cytochrome b-c1 complex subunit 7-like n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CD4A3E) HSP 1 Score: 54.7 bits (130), Expect = 7.690e-8 Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQRE 213 GL + D++ ETP +T AI RLP ++Q+ RI RI RA+ L +K LP+E W ++ +R L +RE Sbjct: 31 GLMHDDVLQETPEVTEAIRRLPQDLQDARIFRIVRAMQLSCQKTILPKEQWTKYEEDVRYLRPYLEEVRRE 101
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A822F4J7_9NEOB (Cytochrome b-c1 complex subunit 7 n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822F4J7_9NEOB) HSP 1 Score: 53.9 bits (128), Expect = 1.540e-7 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQREHDER 225 GL D + ETP + AI RLPA+V + R+ RI+RA+DL MKK LP+E W ++ ++ + RE E+ Sbjct: 31 GLMRDDTLYETPDVQEAIRRLPAKVYDDRMFRIKRALDLDMKKNILPKEQWTKYEEDVSYLQPYIREVIRERKEK 105
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: UPI001ABDF04B (cytochrome b-c1 complex subunit 7 n=2 Tax=Bufo TaxID=8383 RepID=UPI001ABDF04B) HSP 1 Score: 53.1 bits (126), Expect = 3.070e-7 Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQREHDE 222 GL D I E P + AI RLP ++ + R+ RI+RA+DL MKK LP+E W ++F ++ L RE E Sbjct: 31 GLMRDDTIYEDPDVQEAIKRLPPKLYDDRVFRIKRALDLDMKKSILPKEQWTKYEEDFPYLQPYLKEVLREKKE 104
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A0D3A2L3_BRAOL (Cytochrome b-c1 complex subunit 7 n=8 Tax=Brassiceae TaxID=981071 RepID=A0A0D3A2L3_BRAOL) HSP 1 Score: 52.8 bits (125), Expect = 5.420e-7 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 1 GLFYHDIIA--ETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEE--AWEDPWQEFDMMRELLAVTQREHDER 225 GL Y D+ ET + A++RLP EV + R +R++RA+DL MK +YLPE+ A + P++ + ++E+LA+ +RE ER Sbjct: 32 GLRYDDLFDQYETMDIKEALNRLPREVVDARNQRLKRAMDLSMKHEYLPEDLQAVQTPFRGY--LKEMLALVEREKKER 108
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Match: A0A8J6EZ33_ELECQ (Cytochrome b-c1 complex subunit 7 n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EZ33_ELECQ) HSP 1 Score: 51.2 bits (121), Expect = 1.730e-6 Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 1 Query: 1 GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAWEDPWQEFDMMRELLAVTQREHDER 225 GL D + ET + AISRLPA + + RI RI+RA+DL MKK LP++ W ++ + L RE ER Sbjct: 31 GLMRDDTLYETNDVKEAISRLPARLYDDRIFRIKRALDLDMKKSILPKDQWTKYDEDVRYLEPYLKEVIRERKER 105 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108643.1824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108643.1824.1 >prot_M-pyrifera_M_contig108643.1824.1 ID=prot_M-pyrifera_M_contig108643.1824.1|Name=mRNA_M-pyrifera_M_contig108643.1824.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp GLFYHDIIAETPVLTRAISRLPAEVQERRIRRIRRAIDLGMKKQYLPEEAback to top mRNA from alignment at M-pyrifera_M_contig108643:93..317- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108643.1824.1 ID=mRNA_M-pyrifera_M_contig108643.1824.1|Name=mRNA_M-pyrifera_M_contig108643.1824.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=225bp|location=Sequence derived from alignment at M-pyrifera_M_contig108643:93..317- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108643:93..317- >mRNA_M-pyrifera_M_contig108643.1824.1 ID=mRNA_M-pyrifera_M_contig108643.1824.1|Name=mRNA_M-pyrifera_M_contig108643.1824.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig108643:93..317- (Macrocystis pyrifera P11B4 male)back to top |