mRNA_M-pyrifera_M_contig108603.1813.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A3D5DI51_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DI51_9GAMM) HSP 1 Score: 283 bits (723), Expect = 3.510e-88 Identity = 143/205 (69.76%), Postives = 146/205 (71.22%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPDGRGLAE-LVGGG--------------------------RLPSGFGQPVGLSY-SDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNVPTA 531 DFFRLQD LNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAG IGPLTDNAFQFVWNFDEYKGVGLGNPS AWAHPF+K QSTFA FN YFS EPCIG GY P LA G G R PSGFG GL+ S RPDW I NTEPA RWEFRFKAVRMAFTHHYGWND+PVFAF V V A Sbjct: 262 DFFRLQDQLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGTIGPLTDNAFQFVWNFDEYKGVGLGNPSGAWAHPFSKIQSTFAGFNEYFSVEPCIGPGYQPRAGTLATGAFGNGGTVAGVNAAIAANPGVRCGFGGPNDDRKPSGFGTLAGLAGGSARPDWSISNTEPAARWEFRFKAVRMAFTHHYGWNDIPVFAFDGVYVNNA 466
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A1Z8WWV3_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WWV3_9GAMM) HSP 1 Score: 246 bits (629), Expect = 4.730e-74 Identity = 116/201 (57.71%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSP--DGRGLAELVGG----------------------GRLPSGFGQPVGLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNVPTA 531 DFFR+QD++NP+D+GQHFFFDS EDIRIPQWMLS+QYKAG IGPLTDNAFQFVWNFD++ VGLGNPSQ WAHPFAK STF I+N YFS EPC+ + DG + VG R P+GFG P GLS +RPDW+ NTE RWEFR R A +H YGWND+PVF FH+VN+ A Sbjct: 260 DFFRMQDLINPIDYGQHFFFDSMEDIRIPQWMLSVQYKAGEIGPLTDNAFQFVWNFDQFARVGLGNPSQMWAHPFAKDMSTFGIYNTYFSKEPCVTRQMTNNRDGATIDSAVGAVFGHTNVNIIADDICGALGFTDNRTPAGFGTPSGLSVENRPDWEPSNTEMGWRWEFRVSDFRFALSHWYGWNDLPVFKFHTVNLVAA 460
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A7V0ZJE3_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7V0ZJE3_9GAMM) HSP 1 Score: 236 bits (602), Expect = 6.080e-71 Identity = 109/180 (60.56%), Postives = 129/180 (71.67%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPDGRGLAELV---GGGRLPSGFGQPVGLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNVPTA 531 DFFRLQD++NP+DFGQHFFFD FEDIRIPQW ++QYK G+IGPL D A Q VWNFDE++ GLGNPS AWAHPF K+ TFA FN YFS EPC+ A + + V G GRLPSGFG PVGL+ + PD D++NTE R+EFR R A +H+YGW D+PVF F SVNV A Sbjct: 241 DFFRLQDIINPIDFGQHFFFDQFEDIRIPQWAAALQYKGGSIGPLNDTALQLVWNFDEFRAAGLGNPSAAWAHPFGKEIGTFAAFNTYFSPEPCVSAATAEANGADSSAVCQEGDGRLPSGFGIPVGLAETHIPDHDLDNTEIGGRFEFRLFDFRFALSHYYGWTDLPVFRFDSVNVNAA 420
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A7C7X267_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7X267_9GAMM) HSP 1 Score: 231 bits (590), Expect = 5.630e-69 Identity = 104/177 (58.76%), Postives = 129/177 (72.88%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPDGRGLAELV---GGGRLPSGFGQPVGLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNV 522 DFFRLQD++NP+DFGQHFF+D FEDIRIPQW S+QYK G+ G L D A QF+WNFDE+K GLGNPS AWAHPF K+ FA FN YFS EPC+ A + ++ V G GRLPSGFG P+G + +PD D N+E +R+EFR+K VR+A +H+YGW D+PVF F +VNV Sbjct: 271 DFFRLQDIINPIDFGQHFFYDQFEDIRIPQWAASLQYKGGSWGALDDTALQFIWNFDEFKRTGLGNPSHAWAHPFGKEIGVFASFNTYFSPEPCVSAETALANGASSDTVCQAGDGRLPSGFGIPLGTAVDAKPDRDASNSELGLRFEFRYKDVRLALSHYYGWTDLPVFRFDTVNV 447
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A661GWB5_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GWB5_9GAMM) HSP 1 Score: 229 bits (585), Expect = 1.850e-68 Identity = 105/180 (58.33%), Postives = 129/180 (71.67%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPDGRGLAELV---GGGRLPSGFGQPVGLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNVPTA 531 DFFRLQD++NP+DFGQHFFFD FEDIRIPQW S+Q+K G+IGPL D A Q VWNFDE++ GLGNPS AWAHPF K+ TFA FN YFS EPC+ A + V G GRLPSGFG PVGL+ + P +++NTE R+EFR +R A +H+YGW+D+PVF F ++NV A Sbjct: 241 DFFRLQDIINPIDFGQHFFFDQFEDIRIPQWAASLQWKGGSIGPLNDTALQLVWNFDEFRAAGLGNPSAAWAHPFGKEIGTFASFNTYFSPEPCVSAATAASHGADDSTVCQEGDGRLPSGFGIPVGLARTHIPSKELDNTEVGGRFEFRLFDLRFALSHYYGWSDLPVFKFDTINVNAA 420
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A1Y5EH28_9GAMM (Uncharacterized protein n=1 Tax=Cycloclasticus sp. 46_120_T64 TaxID=1856281 RepID=A0A1Y5EH28_9GAMM) HSP 1 Score: 216 bits (550), Expect = 1.970e-63 Identity = 101/179 (56.42%), Postives = 124/179 (69.27%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPDGRGLAELV---GGGRLPSGFGQPVGLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNVPT 528 DFFR+QD++NP+DFGQHFF D+FEDIRIPQW S+QYKAG+IGP + A VWNFDE+ GLG+ SQAWAHPF KQ TFA+FN YFS EPC+ A A V G GR+PSGFG VGLS + P+ + NTE R+EF+ VR A +H+Y W D PVF F+S+N+ T Sbjct: 225 DFFRMQDIVNPMDFGQHFFLDAFEDIRIPQWAASLQYKAGDIGPFGETAITAVWNFDEFVPTGLGHASQAWAHPFGKQIGTFALFNTYFSPEPCVSAATQVAAGAPASTVCTAGDGRMPSGFGIDVGLSEFEMPEHKLSNTELGGRFEFKLGEVRFALSHYYHWGDSPVFKFNSINLNT 403
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A2A4S7T3_9GAMM (Uncharacterized protein n=1 Tax=Piscirickettsiaceae bacterium TaxID=2030828 RepID=A0A2A4S7T3_9GAMM) HSP 1 Score: 207 bits (527), Expect = 5.120e-60 Identity = 95/180 (52.78%), Postives = 120/180 (66.67%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPDGRGLAELV---GGGRLPSGFGQPVGLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNVPTA 531 DFFR+QD++NP+DFGQHFFFD FEDIRIPQW+ S+QYKAG+IGP + A VWNFD+++ VGLG P QAW HP +K+ TFA FN +FS EPC+ + V G GRLPSGFG P+G + PDW + NTE R+EF+ VR A +H Y W D P F++VN+ A Sbjct: 228 DFFRMQDIVNPMDFGQHFFFDPFEDIRIPQWIASLQYKAGDIGPFKEAAITGVWNFDKFEPVGLGGPGQAWQHPVSKEVGTFAAFNTFFSPEPCVSQATATASGAPQSTVCQAGDGRLPSGFGIPLGTTDYGIPDWKLSNTEIGGRFEFKMGEVRFALSHFYHWQDAPTIKFNTVNLNIA 407
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A7Y3M6K3_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M6K3_9DELT) HSP 1 Score: 198 bits (503), Expect = 2.380e-56 Identity = 100/196 (51.02%), Postives = 118/196 (60.20%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPF-AKQQSTFAIFNHYFSTEPCI---------------------GAGYSPDGRGLAELVGGGRLPSGFGQPVGLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPVFAFHSVNV 522 DFFRLQDV+NPVDFGQHFFFDSFEDIRIPQWM+S+Q++ G+IGP TD A Q +WNFD ++ VG G P QAWA F +Q TFA+FN YFS EPC G G PDG G G PSGFG P GL P W +NTE A+R E R +R A T+HYGW D P + +V + Sbjct: 249 DFFRLQDVINPVDFGQHFFFDSFEDIRIPQWMMSVQWRPGSIGPFTDTAIQLIWNFDRFQRVGGGAPYQAWAFDFFGRQIGTFALFNTYFSPEPCAPGGTDFNRATPGDGEIACGGPGLGDDPDG------FGAGVTPSGFGTPAGLRDEKLPAWKFDNTEIALRLEARIWKIRFALTNHYGWWDAPALHWQTVTL 438
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A3C7VUY4_9GAMM (DUF1302 domain-containing protein n=3 Tax=Halieaceae TaxID=1706372 RepID=A0A3C7VUY4_9GAMM) HSP 1 Score: 97.8 bits (242), Expect = 1.870e-20 Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPDGR-GLAELVGGGRLPSGFGQPV-GLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPV 498 D FR+ D++NPVD+ +H +D EDIRIPQWM + +Y+ G +G D FQ VWNFDE++ LG + S F N+ + C + + P GL + G L + F V G+ D P W++ NT+ V+ E +K+V + +++ + +PV Sbjct: 243 DLFRVLDIINPVDYQRHNIYDELEDIRIPQWMATAEYRFGAVGGFDDLNFQAVWNFDEFRPNNLGQGGGPYT--ILDAASFFRAMNNCWENG-CTVSNFVPAAAIGLTDDPG--MLAADFAPGVIGIRDVDMPGWELGNTQGGVKLEGVYKSVGFSLNYYHYFQQLPV 405
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Match: A0A2E0YUA1_9GAMM (DUF1302 domain-containing protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YUA1_9GAMM) HSP 1 Score: 95.5 bits (236), Expect = 1.190e-19 Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 1 Query: 1 DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFQFVWNFDEYKGVGLGNPSQAWAHPFAKQQSTFAIFNHYFSTEPCIGAGYSPD------GRGLAELVGGGRLPSGFGQPV-GLSYSDRPDWDIENTEPAVRWEFRFKAVRMAFTHHYGWNDVPV 498 D FR+ D++NPVD+ +H +D EDIRIPQW+ + +Y+ G D Q VWNFDE++ LG ++ S F N+ + C + + P G L + G + + FG V G+ D PDW+++NT+ ++ E + +V + +++ + +PV Sbjct: 233 DLFRVLDIINPVDYSRHNIYDELEDIRIPQWIATAEYRWGATDTFEDLNLQLVWNFDEFRPNSLGQGGTPYS--ILDAGSFFRAMNNCWENG-CTVSNFVPAQALIDAGAPLPDAGDPGLVAADFGPGVIGIRQVDLPDWELDNTQGGIKLEGVYNSVGFSLNYYHFFQQLPV 402 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108603.1813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108603.1813.1 >prot_M-pyrifera_M_contig108603.1813.1 ID=prot_M-pyrifera_M_contig108603.1813.1|Name=mRNA_M-pyrifera_M_contig108603.1813.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp DFFRLQDVLNPVDFGQHFFFDSFEDIRIPQWMLSIQYKAGNIGPLTDNAFback to top mRNA from alignment at M-pyrifera_M_contig108603:8..610- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108603.1813.1 ID=mRNA_M-pyrifera_M_contig108603.1813.1|Name=mRNA_M-pyrifera_M_contig108603.1813.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=603bp|location=Sequence derived from alignment at M-pyrifera_M_contig108603:8..610- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108603:8..610- >mRNA_M-pyrifera_M_contig108603.1813.1 ID=mRNA_M-pyrifera_M_contig108603.1813.1|Name=mRNA_M-pyrifera_M_contig108603.1813.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig108603:8..610- (Macrocystis pyrifera P11B4 male)back to top |