mRNA_M-pyrifera_M_contig108579.1807.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: A0A6A5C5G3_NAEFO (G domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C5G3_NAEFO) HSP 1 Score: 183 bits (464), Expect = 2.640e-52 Identity = 86/147 (58.50%), Postives = 106/147 (72.11%), Query Frame = 1 Query: 43 KDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDGLSEEFIADTRAFFEGLRKRPRLQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCD 483 K+ + + FQ FN+C +KPN+LV G+TGAGKSSL+NAVFG + G G+PVT HF + EP DKPVV+YDSKGLE EEFI +T FF LR+ P + HIH +WYVVN A GRFE FEA+++REVFAPTPV+ VLNK D Sbjct: 39 KETEELVKSFQDHFNDCTKACKKPNILVAGITGAGKSSLVNAVFGEELARAGAGMPVTQHFQKYEPNDKPVVIYDSKGLEWNSHEEFIKETGKFFMELRQSPDVANHIHVVWYVVNTARGRFENFEAEVVREVFAPTPVIFVLNKSD 185
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: L8GJC7_ACACA (G domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GJC7_ACACA) HSP 1 Score: 180 bits (456), Expect = 3.280e-52 Identity = 84/145 (57.93%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 25 VEQLIVKDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDGLSEEFIADTRAFFEGLRKRPRLQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPV 459 VE LI++D++ I F+++F ECI V+KPNVLV GVTGAGKSSL+NA+FG + VG G P+T HF R P D PVVVYDSKGLE G EEF+AD + F E ++ +P L +HIH IWYV+NA S R E FEA LI+E+FAP + Sbjct: 10 VESLIIEDLEYIAQQFESTFTECIANVKKPNVLVSGVTGAGKSSLVNAIFGEGMAKVGVGKPLTQHFSRYAPDDMPVVVYDSKGLEQGFHEEFVADAKEFLEKIKSQPELGDHIHIIWYVINAGSARIEPFEAFLIKEIFAPADI 154
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: D2VEP0_NAEGR (G domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEP0_NAEGR) HSP 1 Score: 181 bits (459), Expect = 1.090e-51 Identity = 84/147 (57.14%), Postives = 106/147 (72.11%), Query Frame = 1 Query: 43 KDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDGLSEEFIADTRAFFEGLRKRPRLQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCD 483 ++ + + FQ FN+C +KPN+LV G+TGAGKSSL+NAVFG + G G+PVT HF + EP DKPVV+YDSKGLE EEFI +T FF LR+ P + HIH +WYVVN A GRFE FEA+++REVF+PTPV+ VLNK D Sbjct: 38 RETEELVKSFQDHFNDCTKACKKPNILVAGITGAGKSSLVNAVFGEELARAGAGMPVTQHFQKYEPSDKPVVIYDSKGLEWNSHEEFIKETGKFFMQLRQSPDVTNHIHVVWYVVNTARGRFENFEAEVVREVFSPTPVIFVLNKSD 184
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: A0A7S4I3C9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I3C9_9EUKA) HSP 1 Score: 142 bits (358), Expect = 8.660e-37 Identity = 66/158 (41.77%), Postives = 106/158 (67.09%), Query Frame = 1 Query: 25 VEQLIVKDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDGLS-EEFIADTRAFFEGLRKRPR---LQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCDV 486 VE+ + +D + + HF+ ++++ +++P VL+ GV GAGKSS+IN +FGS + G G PVT HF R EP +KP+++YDSKGLE G+ +EFI TR++F L +++ I +WY+VN+A+ RF+ FE Q+ +E+F P++ +LNK D+ Sbjct: 36 VEEFLHEDAEKLMFHFKNAYDKIQDGLKRPKVLIAGVAGAGKSSIINTIFGSEMAKEGAGRPVTQHFQRFEPEEKPIILYDSKGLEVGMQLDEFIQSTRSYFTQLNDGEEERCMEQQIDVVWYIVNSAAARFQDFEEQICKELFKELPIIFILNKSDI 193
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: A0A6B2L5G6_9EUKA (G domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5G6_9EUKA) HSP 1 Score: 136 bits (342), Expect = 2.460e-35 Identity = 66/144 (45.83%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 58 ITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDGLSEEFIADTRAFFEGLRKR--PRLQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCD 483 + F +F + ++QKPNVL+ G+TGAGKSSL+N++FG+ + G G+P+T HF + E D VV+YDSKGLE G + FI +T FF L P L + IH IWY+VN+A R+E FE ++ RE+ P++ VLNK D Sbjct: 8 LVKKFSKAFTKVSSRLQKPNVLITGITGAGKSSLVNSIFGNNIAETGTGVPLTQHFTKYESEDMRVVIYDSKGLEHGEYDNFIQNTNQFFNSLSPGAVPEL-DSIHVIWYIVNSAHSRWEPFEEKICREILNKAPLMFVLNKAD 150
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: A0A7S4IFI3_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IFI3_9EUKA) HSP 1 Score: 137 bits (344), Expect = 8.890e-35 Identity = 68/169 (40.24%), Postives = 105/169 (62.13%), Query Frame = 1 Query: 25 VEQLIVKDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDGLS-EEFIADTRAFFE------GLRKRPR--------LQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCDV 486 VE+ I D + + F+ +F + ++++P+VL+ G TGAGKSS+IN VFGS + G G P+T +F + P +P+V++DSKGLE G+ +EF+ TR FF G + P L++ +H +WYVVNAA RF+ FE ++ RE+F P++ +LNKCD+ Sbjct: 51 VEEFIHDDAEKLRCSFKNAFEKVYHEMRRPHVLIAGNTGAGKSSIINTVFGSEIAKEGAGRPITQNFTKYCPDKQPIVLFDSKGLEAGMQFDEFLLSTREFFHNNEEDIGAKHLPEEFRDDASGLEKRVHLVWYVVNAAGARFQDFEERICRELFGRLPIIFILNKCDI 219
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: A0A6A5C446_NAEFO (G domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C446_NAEFO) HSP 1 Score: 135 bits (339), Expect = 9.150e-34 Identity = 58/152 (38.16%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 31 QLIVKDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDG-LSEEFIADTRAFFEGLRKRPRLQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCD 483 ++I ++ + + + + + Q QKPN+L+ G +G+GKSSL+NAVFG ++ +G+G P+T + + PVV+YDS+G+E G + + F+ADTR FF+ +R+ L +H+H +WYV++ RF+ FEA+ +E P++ VLNK D Sbjct: 163 KIIYEEFNQLKQKLEQNCSTVTQQTQKPNILLLGGSGSGKSSLVNAVFGKSLAEIGEGKPITQRYTKYTGEHSPVVIYDSRGIEHGYIQDGFVADTRRFFKKIRQEESLSKHVHVVWYVIDLTQARFQPFEAEFCKEELKGIPIIFVLNKAD 314
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: UPI001CFEBF70 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEBF70) HSP 1 Score: 134 bits (338), Expect = 1.240e-33 Identity = 58/152 (38.16%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 31 QLIVKDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDG-LSEEFIADTRAFFEGLRKRPRLQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCD 483 ++I ++ + + + + + Q QKPN+L+ G +G+GKSSL+NAVFG ++ +G+G P+T + + PVV+YDS+G+E G + + F+ADTR FF+ +R+ L +H+H +WYV++ RF+ FEA+ +E P++ VLNK D Sbjct: 177 KIIYQEFNELKQKLEQNCSTVTQQTQKPNILLLGGSGSGKSSLVNAVFGKSLAEIGEGKPITQRYTKYTGEHSPVVIYDSRGIEHGYIQDGFVADTRRFFKKIRQEESLAKHVHVVWYVIDLTQARFQPFEAEFCKEELKGIPIIFVLNKAD 328
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: D2VF35_NAEGR (GTP binding protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VF35_NAEGR) HSP 1 Score: 128 bits (322), Expect = 1.730e-31 Identity = 57/152 (37.50%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 31 QLIVKDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDG-LSEEFIADTRAFFEGLRKRPRLQEHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCD 483 ++I ++ + + + + KPN+L+ G +G+GKSSL+NAVFG ++ +G+G PVT + + PVV+YDS+G+E G + + F+ADTR FF+ +R L +H+H +WYV++ RF+ FEA+ R+ P++ VLNK D Sbjct: 163 RIIYSQVNQMKEQLSSDCSTIAEKTSKPNILLLGGSGSGKSSLVNAVFGKSLAEIGEGKPVTQQYTKYAGEHSPVVIYDSRGIEHGYIQDGFVADTRRFFKKIRGEKDLAKHVHVVWYVLDLTQARFQPFEAEFCRDELKGIPIIFVLNKAD 314
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Match: A0A6B2L5C1_9EUKA (G domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L5C1_9EUKA) HSP 1 Score: 125 bits (315), Expect = 2.140e-31 Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 1 Query: 109 KPNVLVCGVTGAGKSSLINAVFGSAVVAVGDGIPVTAHFVRIEPPDKPVVVYDSKGLEDGLSEEFIADTRAFFEGLRKRPRLQ-EHIHAIWYVVNAASGRFEAFEAQLIREVFAPTPVVIVLNKCDV 486 KPNVL+ G+TGAGKSSLINA+FG V G G+P+T HF + E D VV+YDSKGLE G E+F+ T FFE + + + IH +WY+VN+A R+E FE + R++ P++ VLNK D+ Sbjct: 9 KPNVLITGITGAGKSSLINAIFGKNVAETGTGVPLTQHFTKYESDDMRVVIYDSKGLEHGEFEDFMNTTDHFFESHKPGTVSETDTIHVVWYIVNSAHSRWEPFEEVICRKLLNRAPLMFVLNKADI 135 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108579.1807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108579.1807.1 >prot_M-pyrifera_M_contig108579.1807.1 ID=prot_M-pyrifera_M_contig108579.1807.1|Name=mRNA_M-pyrifera_M_contig108579.1807.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp MNSITGRTVEQLIVKDIDSITSHFQASFNECILQVQKPNVLVCGVTGAGKback to top mRNA from alignment at M-pyrifera_M_contig108579:10..495+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108579.1807.1 ID=mRNA_M-pyrifera_M_contig108579.1807.1|Name=mRNA_M-pyrifera_M_contig108579.1807.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig108579:10..495+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108579:10..495+ >mRNA_M-pyrifera_M_contig108579.1807.1 ID=mRNA_M-pyrifera_M_contig108579.1807.1|Name=mRNA_M-pyrifera_M_contig108579.1807.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig108579:10..495+ (Macrocystis pyrifera P11B4 male)back to top |