mRNA_M-pyrifera_M_contig108548.1800.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: K0C4B0_CYCSP (Heavy metal efflux pump n=9 Tax=Gammaproteobacteria TaxID=1236 RepID=K0C4B0_CYCSP) HSP 1 Score: 399 bits (1025), Expect = 1.120e-129 Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGY+QSIDDLNSIPV VDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENAL TIQAVRAK Sbjct: 105 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYIQSIDDLNSIPVAVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALATIQAVRAK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A1M6L502_9GAMM (Heavy metal efflux pump, CzcA family n=1 Tax=Cycloclasticus pugetii TaxID=34068 RepID=A0A1M6L502_9GAMM) HSP 1 Score: 374 bits (961), Expect = 1.610e-125 Identity = 183/203 (90.15%), Postives = 192/203 (94.58%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLES+NYVSGRLPQG+TPTLGPDATGVGW+YEYALVDKTGKHDLAQLRSLQDWYLRYPLQTV GV+EVASVGGYVKQYQVEVDPNALLRYNIPLNK+KMAIK SN DVGGRLVEMAETEYMVR GY+QSIDDLN IPV VD NGTP+RL+D+A VQIGPELRRGLVDLNGEGEVAGGVVIMRFGENAL TIQAVR K Sbjct: 105 WARSRVLESLNYVSGRLPQGVTPTLGPDATGVGWIYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVNGVAEVASVGGYVKQYQVEVDPNALLRYNIPLNKVKMAIKRSNNDVGGRLVEMAETEYMVRSRGYIQSIDDLNKIPVSVDENGTPVRLKDIARVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALATIQAVRKK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A2D8IUV2_9GAMM (CusA/CzcA family heavy metal efflux RND transporter n=4 Tax=Halieaceae TaxID=1706372 RepID=A0A2D8IUV2_9GAMM) HSP 1 Score: 380 bits (975), Expect = 2.390e-122 Identity = 187/203 (92.12%), Postives = 198/203 (97.54%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLESINYVSGRLPQG+TPTLGPDATGVGWVYEYALVD++GKHDLA+LRSLQDWYLRYPLQTV GVSEVASVGG+VKQYQVEVDPNALLRYNIPL+K++MAIKMSNKDVGGRLVEMAETEYMVRGLGY+QSIDDLNSIPV VD NGTPIRL+DVA+VQIGPELRRGLVDLNGEGEVAGGVVIMRFGENAL TIQAVR K Sbjct: 105 WARSRVLESINYVSGRLPQGVTPTLGPDATGVGWVYEYALVDRSGKHDLAELRSLQDWYLRYPLQTVNGVSEVASVGGFVKQYQVEVDPNALLRYNIPLDKVRMAIKMSNKDVGGRLVEMAETEYMVRGLGYIQSIDDLNSIPVSVDENGTPIRLRDVANVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALATIQAVREK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A2E7IRH7_9GAMM (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Spongiibacteraceae bacterium TaxID=2026793 RepID=A0A2E7IRH7_9GAMM) HSP 1 Score: 378 bits (970), Expect = 9.560e-122 Identity = 187/201 (93.03%), Postives = 195/201 (97.01%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVR 603 WARSRVLES+NYVSGRLP+GITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTV GV+EVASVGGYVKQYQVEVDPNALLRYNIPLNKIK+AIK SNKDVGGRLVEM+ETEYMVRGLGY+QSIDDLNSIPV VD NGTPIRLQDVAHV IGPELRRG+V+LNGEGEVAGGVVIMRFGENAL TIQAVR Sbjct: 105 WARSRVLESLNYVSGRLPKGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVAGVAEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKVAIKESNKDVGGRLVEMSETEYMVRGLGYIQSIDDLNSIPVAVDNNGTPIRLQDVAHVHIGPELRRGIVELNGEGEVAGGVVIMRFGENALATIQAVR 305
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A7C1TWU9_9GAMM (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1TWU9_9GAMM) HSP 1 Score: 354 bits (909), Expect = 9.550e-121 Identity = 172/203 (84.73%), Postives = 187/203 (92.12%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLE +NYVSGRLP G+ PTLGPDATGVGWVYEYALVD TGKHDLAQLRS+QDWYLRYPLQTV GVSEVAS+GGYVKQYQVEVDPNALL Y+IPL+K+K AI+ SN DVGGRLVEMAETEYMVRGLGY++SI DL SIPVGVD NGTPIRLQDVAHVQ+GPELRRG+ +LNG+GEVAGGV+IMRFGENAL TIQ VR K Sbjct: 105 WARSRVLEYLNYVSGRLPPGVNPTLGPDATGVGWVYEYALVDHTGKHDLAQLRSIQDWYLRYPLQTVPGVSEVASIGGYVKQYQVEVDPNALLHYHIPLSKVKRAIQRSNNDVGGRLVEMAETEYMVRGLGYIKSIADLKSIPVGVDKNGTPIRLQDVAHVQLGPELRRGVAELNGKGEVAGGVIIMRFGENALATIQGVRKK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A7C5BPX5_9GAMM (Efflux RND transporter permease subunit (Fragment) n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A7C5BPX5_9GAMM) HSP 1 Score: 355 bits (911), Expect = 9.910e-121 Identity = 169/203 (83.25%), Postives = 189/203 (93.10%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLES+NYVSG LP+ +TPTLGPDATGVGW+YEYAL+DKTGKHDLAQLRS+QDWYLRYPLQTV+GVSEVAS+GG+VKQYQVEVDPNAL YNIPL+K+K AIK SN DVGGRL+EMAETEYMVRGLGY++S+ DLN IPVGVDANGTPIRLQDVAHV +GPELRRGLV+LNGEGEVA GV+IMRFGENA TI+AV+ K Sbjct: 105 WARSRVLESLNYVSGNLPEKVTPTLGPDATGVGWIYEYALIDKTGKHDLAQLRSIQDWYLRYPLQTVKGVSEVASIGGFVKQYQVEVDPNALQAYNIPLSKVKQAIKRSNSDVGGRLIEMAETEYMVRGLGYIRSVADLNVIPVGVDANGTPIRLQDVAHVHLGPELRRGLVELNGEGEVAAGVIIMRFGENAQATIEAVKTK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: S5TWU3_9GAMM (Heavy metal efflux pump, CzcA family n=2 Tax=Piscirickettsiaceae TaxID=135616 RepID=S5TWU3_9GAMM) HSP 1 Score: 374 bits (961), Expect = 2.430e-120 Identity = 183/203 (90.15%), Postives = 192/203 (94.58%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLES+NYVSGRLPQG+TPTLGPDATGVGW+YEYALVDKTGKHDLAQLRSLQDWYLRYPLQTV GV+EVASVGGYVKQYQVEVDPNALLRYNIPLNK+KMAIK SN DVGGRLVEMAETEYMVR GY+QSIDDLN IPV VD NGTP+RL+D+A VQIGPELRRGLVDLNGEGEVAGGVVIMRFGENAL TIQAVR K Sbjct: 105 WARSRVLESLNYVSGRLPQGVTPTLGPDATGVGWIYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVNGVAEVASVGGYVKQYQVEVDPNALLRYNIPLNKVKMAIKRSNNDVGGRLVEMAETEYMVRSRGYIQSIDDLNKIPVSVDENGTPVRLKDIARVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALATIQAVRKK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A7C3QBB9_9GAMM (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C3QBB9_9GAMM) HSP 1 Score: 359 bits (921), Expect = 4.960e-118 Identity = 172/203 (84.73%), Postives = 194/203 (95.57%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLE +NYVSGRLP+G+TPTLGPDATGVGW+YEYALVD+TG+HDLAQLRS+QDWYLRYPLQTV GVSEVASVGG+VKQYQVEVDPNAL YNIPL+K++MAI SNKDVGGRL+EMAETEYMVRGLGY++SIDD+N+IPV VDA+GTPIRL+DVA+V++GPELRRGLVDLNGEGEVAGGVVIMRFGENAL TI+ VRAK Sbjct: 105 WARSRVLEYLNYVSGRLPEGVTPTLGPDATGVGWIYEYALVDRTGRHDLAQLRSIQDWYLRYPLQTVSGVSEVASVGGFVKQYQVEVDPNALQAYNIPLSKVRMAIMRSNKDVGGRLIEMAETEYMVRGLGYIKSIDDINNIPVSVDAHGTPIRLRDVANVKLGPELRRGLVDLNGEGEVAGGVVIMRFGENALSTIEGVRAK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A661HG82_9GAMM (CusA/CzcA family heavy metal efflux RND transporter n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A661HG82_9GAMM) HSP 1 Score: 368 bits (944), Expect = 6.330e-118 Identity = 173/203 (85.22%), Postives = 195/203 (96.06%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLESINYVSGRLP+GITPTLGPDATGVGWVYEYALVD+TG+HDL+QLRS+QDWYLRYPLQTV+GV+EVASVGG+VKQYQ+EVDPNALLRYNIPL K+K A+K SN DVGGRL+E+AETEYMVRG GY+QS+DD+NSIPVGVD +GTP+R++D+AHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENAL TI+ VRAK Sbjct: 105 WARSRVLESINYVSGRLPEGITPTLGPDATGVGWVYEYALVDRTGQHDLSQLRSIQDWYLRYPLQTVQGVAEVASVGGFVKQYQIEVDPNALLRYNIPLTKVKQAVKQSNNDVGGRLIELAETEYMVRGRGYIQSVDDINSIPVGVDGSGTPVRIRDIAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALATIRGVRAK 307
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Match: A0A7C5DTG9_9DELT (Efflux RND transporter permease subunit (Fragment) n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C5DTG9_9DELT) HSP 1 Score: 349 bits (896), Expect = 4.700e-117 Identity = 172/203 (84.73%), Postives = 187/203 (92.12%), Query Frame = 1 Query: 1 WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAQLRSLQDWYLRYPLQTVEGVSEVASVGGYVKQYQVEVDPNALLRYNIPLNKIKMAIKMSNKDVGGRLVEMAETEYMVRGLGYVQSIDDLNSIPVGVDANGTPIRLQDVAHVQIGPELRRGLVDLNGEGEVAGGVVIMRFGENALVTIQAVRAK 609 WARSRVLES+NYVSGRLP+ + PTLGPDATGVGW+YEYALVD+TGKHDLAQLRS+QDWY+RYPLQTV GVSEVASVGGYVKQYQVEVDPNAL+RY I L KIK AIK SN+DVGGRL+EMAETEYMVRGLGY++SI DL SI VGVDA GTPIRL+DVA+VQIGPELRRG+VDLNGEGEVA GVVIMRFGENAL TIQ VR K Sbjct: 105 WARSRVLESLNYVSGRLPKEVNPTLGPDATGVGWIYEYALVDRTGKHDLAQLRSIQDWYMRYPLQTVTGVSEVASVGGYVKQYQVEVDPNALVRYKITLAKIKRAIKRSNRDVGGRLIEMAETEYMVRGLGYIRSIADLKSIAVGVDAQGTPIRLRDVANVQIGPELRRGIVDLNGEGEVAAGVVIMRFGENALATIQGVRKK 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108548.1800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108548.1800.1 >prot_M-pyrifera_M_contig108548.1800.1 ID=prot_M-pyrifera_M_contig108548.1800.1|Name=mRNA_M-pyrifera_M_contig108548.1800.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp WARSRVLESINYVSGRLPQGITPTLGPDATGVGWVYEYALVDKTGKHDLAback to top mRNA from alignment at M-pyrifera_M_contig108548:2..610- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108548.1800.1 ID=mRNA_M-pyrifera_M_contig108548.1800.1|Name=mRNA_M-pyrifera_M_contig108548.1800.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108548:2..610- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108548:2..610- >mRNA_M-pyrifera_M_contig108548.1800.1 ID=mRNA_M-pyrifera_M_contig108548.1800.1|Name=mRNA_M-pyrifera_M_contig108548.1800.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig108548:2..610- (Macrocystis pyrifera P11B4 male)back to top |