mRNA_M-pyrifera_M_contig108464.1794.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: A0A7K2DAF6_9ACTN (Mrr restriction system protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DAF6_9ACTN) HSP 1 Score: 241 bits (615), Expect = 7.820e-77 Identity = 129/197 (65.48%), Postives = 153/197 (77.66%), Query Frame = 1 Query: 22 EGFDEELLGVAYPARDKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSR-VRTRDTATIDRSSEVESESPPEDDEPWREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPTKSIGRETVALFQSDAVAAGAEHGI 609 EGF EE+L + Y R +S+LLDRL WARSYCKLGGALESPRRGL+L+ LGRE+ AL +A ERLR L+ VR++R + + A + S E EDD WRE LL RLH+L PDAFE F LYLLRSQG+EL+RVGG GDEGIDGIGTAP+ +VL+TTVAVQAKRYEP+K++GRETVALFQSDA AAGAE G+ Sbjct: 39 EGFSEEMLSITYEGRQQSILLDRLAWARSYCKLGGALESPRRGLFLVTDLGREIGALSTTDAEERLRALDSAVRQARRKKPKGDAPVSTSHEAPEPEVDEDDT-WREILLSRLHELTPDAFEHFVLYLLRSQGMELRRVGGTGDEGIDGIGTAPIGSVLTTTVAVQAKRYEPSKTVGRETVALFQSDANAAGAERGV 234
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: A0A7V8YPD7_9ACTN (Restriction endonuclease (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YPD7_9ACTN) HSP 1 Score: 224 bits (571), Expect = 3.920e-70 Identity = 120/206 (58.25%), Postives = 155/206 (75.24%), Query Frame = 1 Query: 4 DQVVANEGFDEELLGVAYPARDKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVR---RSRVRTRDTATIDRSSEVESESPPEDDEP-WREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPTKSIGRETVALFQSDAVAAGAEHGI 609 ++V+ + G +E + +AYPA DKS+ LDR +WARSY KLGG LESPRRGL+L+ LGR +LAL ++ A+ RLR+++ +VR R+R R RD+ EVE SPP+D +P WR +L+ RLH L PD FERF LYLLR+ GL L++ GG GDEGIDGIGTAPL+ VLS+TVAVQAKRYEP+ ++GR+ VALFQ DA AAGAE + Sbjct: 56 ERVMKDVGLTDEHVALAYPANDKSIALDRCDWARSYLKLGGVLESPRRGLFLITELGRTILALSDDVAQTRLREIDAQVRADRRTRGRERDS-----EGEVEDVSPPDDQDPAWRAQLVTRLHGLAPDGFERFVLYLLRAFGLVLEQTGGPGDEGIDGIGTAPLSEVLSSTVAVQAKRYEPSNTVGRDAVALFQRDAAAAGAERAV 256
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: A0A6G2K693_9ACTN (Mrr restriction system protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2K693_9ACTN) HSP 1 Score: 200 bits (508), Expect = 2.700e-60 Identity = 114/198 (57.58%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 34 EELLGVAYPARDKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSRVRTRDTATIDRSSEVESESPPEDDE----PWREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPTKS--IGRETVALFQSDAVAAGAEHGI 609 EELL + YP +LLDR+ WARS CK GALE PRRGLYLL PLGRE+LALPE +A ERLRDL RE + R + D + + + P DD WR+ LL RLH + P AFE F LYLLRS LEL+ VGG GDEGIDGIG AP++ VLS VAVQ KRY P S IGR+ VALFQ DA AGAE I Sbjct: 45 EELLALRYPKSGDFILLDRISWARSDCKTFGALEQPRRGLYLLTPLGREILALPENQAVERLRDLRRETSATARRAASSQPSDDETAEDEDDLPHDDAREATEWRDALLDRLHSMSPTAFEHFVLYLLRSFDLELEHVGGSGDEGIDGIGVAPISPVLSAKVAVQVKRYNPASSAGIGRQEVALFQRDAEVAGAERAI 242
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: UPI001391FC3E (restriction endonuclease n=1 Tax=Nesterenkonia haasae TaxID=2587813 RepID=UPI001391FC3E) HSP 1 Score: 197 bits (500), Expect = 2.250e-59 Identity = 116/212 (54.72%), Postives = 144/212 (67.92%), Query Frame = 1 Query: 7 QVVANEGFDEELLGVAYPAR-DKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSRVRTRDTATIDRS----SEVE-----SESPPEDDEPWREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPT-KSIGRETVALFQSDAVAAGAEHGI 609 +V + DEE L V YP R D S+ LDRL+WARSY K GALESP RG++L+ LG+ LLALPE EA ++RDL+R RR+R R +++ S S++E ESP + W++ LL RLH+L P FE F LYLLR GLEL+RVGG GDEGIDGIGTAPL+ VLS+ VAVQ KRY+P + +GR+TVALFQ DA GAE I Sbjct: 35 KVTEDLDIDEETLSVVYPNRPDDSIFLDRLDWARSYAKQIGALESPSRGVFLITDLGKNLLALPESEAHTKVRDLDRSFRRNRGRKKNSQAASESVSDVSDIELDVGLEESP---GDTWKDILLARLHKLSPMGFEEFVLYLLRLYGLELERVGGSGDEGIDGIGTAPLSPVLSSRVAVQVKRYDPQGRVVGRDTVALFQRDAQMKGAERAI 243
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: A0A8I1SCG0_9ACTN (Restriction endonuclease n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A8I1SCG0_9ACTN) HSP 1 Score: 192 bits (487), Expect = 2.570e-57 Identity = 116/215 (53.95%), Postives = 145/215 (67.44%), Query Frame = 1 Query: 7 QVVANEGFDEELLGVAYPAR-DKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSRVRT--RDTAT---IDRSSEV-----ESESPPED--DEPWREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPT-KSIGRETVALFQSDAVAAGAEHGI 609 +VV + F +E+L V R + SVLL+R+ WARSY KL GALES RRG++L+ LG+EL ALP+ E R+R +L+RE RR R R ++ AT +D + E+PP E WR +LL RLHQL PD FE F LYLLR GLEL+RVGG GDEGIDGIGTAP++ VLS+ VAVQ KRY+P +++GRE VALFQ DA GAE I Sbjct: 35 RVVQDLAFTDEMLAVQRSNRPEASVLLERVYWARSYAKLIGALESSRRGVFLVTALGKELAALPDAEGRQRALELDREYRRQRARRGRQEAATEPDLDPDDAALAELDDGEAPPGSAGGEQWRAQLLARLHQLSPDGFEEFVLYLLRLYGLELERVGGTGDEGIDGIGTAPISPVLSSRVAVQVKRYDPNGRAVGREVVALFQRDAQTKGAERAI 249
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: A0A2A9F2I2_9MICO (Restriction system protein n=2 Tax=Georgenia soli TaxID=638953 RepID=A0A2A9F2I2_9MICO) HSP 1 Score: 191 bits (484), Expect = 4.230e-57 Identity = 113/218 (51.83%), Postives = 143/218 (65.60%), Query Frame = 1 Query: 4 DQVVANEGFDEELLGVAYPAR-DKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSRV---RTRDTATIDRSSEV-----------ESESPPEDDEPWREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPT-KSIGRETVALFQSDAVAAGAEHGI 609 DQV+ EE+L V P R + SVL++R+ WARSY KL GALESP+RG++LL GRELLALPEEE R R+ +L+R+ RR+R + + + + ++ + W++ LLGRLHQL PD FE F LYLLR GLEL+RVGG GDEGIDGIGTAP++ VLS+ VAVQ KRY+P + +GRETVALFQ DA GAE I Sbjct: 15 DQVLKELAPSEEMLAVVQPKRPEASVLMERVHWARSYAKLIGALESPKRGVFLLTQSGRELLALPEEEGRARVFELDRDYRRNRATKGKEKPASAMPXXXXXXXXXXXXXXAYQATTTGSGSARWQDVLLGRLHQLSPDDFEEFVLYLLRLYGLELERVGGAGDEGIDGIGTAPISPVLSSRVAVQIKRYDPNGRPVGRETVALFQRDAQTKGAERAI 232
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: A0A4V0YEG9_9MICO (Mrr restriction system protein n=1 Tax=Xylanimonas allomyrinae TaxID=2509459 RepID=A0A4V0YEG9_9MICO) HSP 1 Score: 190 bits (483), Expect = 1.090e-56 Identity = 114/220 (51.82%), Postives = 141/220 (64.09%), Query Frame = 1 Query: 4 DQVVANEGFDEELLGVAYPARD-KSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSRVRTRDTATIDRS--------------SEVESESPPEDDEP--WREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPT-KSIGRETVALFQSDAVAAGAEHGI 609 D ++ E+L + Y + K+V+ DR+ W RSY KL GALESP+RG++LLAPLG++LLALPEEE ++R+ L RE RRSR R T D S+V E E DEP W++ RLH+L P AFE F LYLLR GL+L+RVGG GDEGIDGIGTAP++ VLS+ VAVQ KRY+P K +GRE VALFQ DA GAE I Sbjct: 34 DHILGEVDPTAEMLALTYESDPTKAVIADRVAWGRSYAKLIGALESPKRGVFLLAPLGKDLLALPEEEGKQRVLVLEREFRRSRPRKSSARTTDSPEVPNGFVADPIQDPSDVAIEPEDEADEPLSWKDTPRARLHKLSPTAFEDFVLYLLRLYGLQLERVGGSGDEGIDGIGTAPISPVLSSRVAVQVKRYDPNGKPVGREVVALFQRDAQTKGAERAI 253
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: UPI0004650695 (restriction endonuclease n=1 Tax=Tomitella biformata TaxID=630403 RepID=UPI0004650695) HSP 1 Score: 190 bits (482), Expect = 2.330e-56 Identity = 109/202 (53.96%), Postives = 140/202 (69.31%), Query Frame = 1 Query: 34 EELLGVAYPAR-DKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSRVRTRDTATIDRSSEVESESPPED--------DEPWREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPT-KSIGRETVALFQSDAVAAGAEHGI 609 E+LL V P R D SVL++R++W RSY KL GA+E+P RGLYLL LG+ELL++P EA +++ +++RE RR+R ++ +T + E +P ED D W + LLGRLH+L P FE F L+LLR GLEL+RVGG GDEGIDGIGTAPL+ VLS+ VAVQ KRY+P + IGR+ VALFQ DA A GAE I Sbjct: 67 EDLLTVTRPNRPDSSVLIERIDWGRSYAKLIGAVETPSRGLYLLTALGKELLSIPAAEAEQQVLEMDREYRRNRPARKNPSTTSPLTSSEDLTPVEDVDLEEDVVDAEWSDVLLGRLHRLTPVGFEEFVLFLLRRYGLELRRVGGSGDEGIDGIGTAPLSPVLSSRVAVQVKRYDPDGRPIGRDVVALFQRDAQAKGAERAI 268
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: A0A0F6QYH3_9CORY (Restriction endonuclease n=2 Tax=Corynebacterium TaxID=1716 RepID=A0A0F6QYH3_9CORY) HSP 1 Score: 187 bits (476), Expect = 1.490e-55 Identity = 112/217 (51.61%), Postives = 143/217 (65.90%), Query Frame = 1 Query: 4 DQVVANEGFDEELLGVAYPAR-DKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSRVRTR----------DTATIDRSSEVESESPPEDDEP---WREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPT-KSIGRETVALFQSDAVAAGAEHGI 609 DQV+ N E LL + YP+R ++SVL+DR+ W RS KL G LE P +G+Y+ LG ELL + E+EA +R+RDL+RE R + R + +T + S EV +E+ EDD+ W+ +LL RLH+L P+ FE+F LYLLR GLEL +GG GDEGIDGIGTAPL+ VLS+ VAVQ KRY P K IGR+TVALFQ DA GAE I Sbjct: 43 DQVLDNYPDVERLLEMTYPSRPNQSVLIDRIAWGRSTAKLIGVLEQPSKGMYITTDLGEELLGVSEDEAIQRIRDLDREYSRQQRRKKSDKIQPPSPAETDEEEPSEEVLAETDTEDDDSTATWKVQLLDRLHRLTPEGFEKFVLYLLRRYGLELTHIGGSGDEGIDGIGTAPLSPVLSSRVAVQVKRYAPNGKPIGRDTVALFQRDAQTKGAERAI 259
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Match: K8XRQ4_RHOOP (Mrr restriction system protein n=1 Tax=Rhodococcus opacus M213 TaxID=1129896 RepID=K8XRQ4_RHOOP) HSP 1 Score: 186 bits (471), Expect = 5.400e-55 Identity = 115/210 (54.76%), Postives = 140/210 (66.67%), Query Frame = 1 Query: 22 EGFD--EELLGVAYPAR-DKSVLLDRLEWARSYCKLGGALESPRRGLYLLAPLGRELLALPEEEARERLRDLNREVRRSR-VRTR---------DTATIDRSSEVESESPPEDDEPWREELLGRLHQLPPDAFERFALYLLRSQGLELQRVGGVGDEGIDGIGTAPLTAVLSTTVAVQAKRYEPT-KSIGRETVALFQSDAVAAGAEHGI 609 EG D EELL V R D SVL++R++W RSY KL GALE+P RGLYLL LG+ELL+LP ++A ++ L+RE RR+R R R D ++ +VE E D W + LLGRLH+L P FE F L+LLR GLEL+RVGG GDEGIDGIGTAPL+ VLS+ VAVQ KRY+P + IGR+ VALFQ DA A GAE I Sbjct: 38 EGVDNAEELLAVTRQNRPDASVLIERIDWGRSYAKLIGALETPSRGLYLLTSLGKELLSLPAQDAEQQALKLDREFRRNRPARNRPRAGKSPFEDDVSVVVGEDVEEEIADAD---WADVLLGRLHRLTPTGFEEFVLFLLRRYGLELRRVGGSGDEGIDGIGTAPLSPVLSSRVAVQVKRYDPDGRPIGRDVVALFQRDAQAKGAERAI 244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108464.1794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108464.1794.1 >prot_M-pyrifera_M_contig108464.1794.1 ID=prot_M-pyrifera_M_contig108464.1794.1|Name=mRNA_M-pyrifera_M_contig108464.1794.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp IDQVVANEGFDEELLGVAYPARDKSVLLDRLEWARSYCKLGGALESPRRGback to top mRNA from alignment at M-pyrifera_M_contig108464:3..611- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108464.1794.1 ID=mRNA_M-pyrifera_M_contig108464.1794.1|Name=mRNA_M-pyrifera_M_contig108464.1794.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108464:3..611- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108464:3..611- >mRNA_M-pyrifera_M_contig108464.1794.1 ID=mRNA_M-pyrifera_M_contig108464.1794.1|Name=mRNA_M-pyrifera_M_contig108464.1794.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig108464:3..611- (Macrocystis pyrifera P11B4 male)back to top |