mRNA_M-pyrifera_M_contig10842.1787.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10842.1787.1
Unique NamemRNA_M-pyrifera_M_contig10842.1787.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: D7FM74_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM74_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 2.210e-130
Identity = 173/218 (79.36%), Postives = 190/218 (87.16%), Query Frame = 1 
Query:    1 RSVRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAKVEHPCSKLTEMLIIEGEA--HDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEGEWRPPA 648
            RSVR++ HT+ MEWAPSPSPSVWRKRV LEGPQESGRVTSVVRYDANS+F EHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGF HAP S+DGCVLWVKLRQHGGPSR H+RLDT +M WEDTD PGV  K LYSHPDH ESMRIEKW+AGAKVE  C K+TE L++EGEA  HD SE F +RSWL +PAG T+SMT+  GC+VFVKEGEW PP+
Sbjct:    9 RSVRVSVHTSGMEWAPSPSPSVWRKRVALEGPQESGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPCSRDGCVLWVKLRQHGGPSRKHTRLDTNSMQWEDTDIPGVKAKELYSHPDHVESMRIEKWDAGAKVERECQKMTEFLVLEGEAEAHDASETFTKRSWLRLPAGATLSMTSAAGCQVFVKEGEWLPPS 226
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BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A1Y5TZ85_9PROT (ChrR Cupin-like domain protein n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5TZ85_9PROT)

HSP 1 Score: 216 bits (550), Expect = 5.250e-67
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 1 
Query:    7 VRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAKV-EHPCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEGEWRPPA 648
             R+   T  M W  SPSPSVWRKR+ L GP E+GRVT++VRY+  S F  H HPDGEEILVLEG++ D +GD+PAG+Y+LNPEGF HAP S DGC+L+VKLRQ GGP R H  +DT  + W+  + PG +VK LY+ PD  E MR+ + + GA+V  H   +  E+L++EG   D    + + SWL  P G   S+ +  G  ++VK+G   PPA
Sbjct:   11 ARVAMDTAAMAWQASPSPSVWRKRLDLSGPAEAGRVTALVRYEPGSRFPAHEHPDGEEILVLEGTFSDEHGDYPAGSYLLNPEGFRHAPFSVDGCLLFVKLRQFGGPGRAHHAIDTAALDWQPGNMPGRSVKPLYAAPDGIEQMRLVRLDPGAQVPRHVHDRGEEVLVLEGAIADEDGTYGKGSWLRFPDGSAHSVRSEHGAVIYVKQGHL-PPA 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A536YCZ3_9PROT (Anti-sigma factor n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YCZ3_9PROT)

HSP 1 Score: 210 bits (534), Expect = 2.150e-64
Identity = 108/208 (51.92%), Postives = 132/208 (63.46%), Query Frame = 1 
Query:    4 SVRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAKVEHPCSKL-TEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVK 624
            SVR  A T RMEWAPSPS SVWRKRV L GP ESG+VTSVVRY   S F  H HP GEEILVLEG + D +GD PAGT++LNPEGF HAP S+ GCVL+VKLRQ  G  R H  +DT  + WE +  P VA KALY      + MR+E+WE  A +     +   E+ ++ GE  D + A+    WL +PAG      +  GC V++K
Sbjct:   10 SVRAVADTTRMEWAPSPSRSVWRKRVHLVGPPESGQVTSVVRYGPRSRFPAHDHPQGEEILVLEGVFSDEHGDWPAGTFLLNPEGFRHAPFSEPGCVLFVKLRQFPGRERSHIVIDTHKLAWEPSSLPAVAYKALYQQTGFSDVMRLERWEPQADLGVVSYEQGAELFVLGGEFVDEAGAYSAGCWLRLPAGSEHHPRSAGGCTVYIK 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A7Y2ICR3_9GAMM (Anti-sigma factor n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y2ICR3_9GAMM)

HSP 1 Score: 209 bits (531), Expect = 4.890e-64
Identity = 101/212 (47.64%), Postives = 136/212 (64.15%), Query Frame = 1 
Query:    4 SVRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEA---GAKVEHPCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEG 630
            +VR    T  MEW  SPS +VWRKRV L G  ESG+VTS+VRY   S F  H HP+GEEILVLEG + D +GD PAGTY+LNPEGF HAP S+ GC+L+VKLRQ  GP R H  +DT++  W+ T + GV  K+LY    + ++ R+E+WEA      + H   +  E  +++GE  D    +   +WL +PAGG  S  T  GC++++K+G
Sbjct:   13 TVRAFMDTQAMEWTASPSGTVWRKRVHLVGAPESGQVTSIVRYQPESSFPAHDHPEGEEILVLEGVFSDEHGDWPAGTYLLNPEGFRHAPFSQQGCLLFVKLRQFPGPDREHHVIDTRDREWQPTQRKGVWQKSLYRQAGYSDTTRLERWEAESTAGTISH--EQGAEFFVLDGEFEDDEGVYPAGTWLRIPAGGMHSPGTSRGCQLYIKQG 222
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BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A7C2JUM9_9GAMM (Anti-sigma factor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2JUM9_9GAMM)

HSP 1 Score: 206 bits (523), Expect = 7.910e-63
Identity = 102/210 (48.57%), Postives = 135/210 (64.29%), Query Frame = 1 
Query:   10 RLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAK---VEHPCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEG 630
            R+   T  M W PSPS +V+RKRV L GP ESG+VTSVVRY   + F  H HPDGEEILVLEG + D +GD PAGTY+LNPEGF H+P S+DGCVL+VKLRQ  G +R H  L T  + W    + GVAV+ LY+     ++MR+E+W   A+   +E+P     E+ ++EG   D    F + +WL +P G   S +T  GC +++KEG
Sbjct:   17 RVAVDTAAMAWTPSPSRTVFRKRVHLVGPPESGQVTSVVRYGPGATFHTHAHPDGEEILVLEGVFSDEHGDWPAGTYLLNPEGFRHSPFSRDGCVLFVKLRQFPGRTREHVALRTDTLEWRPAARAGVAVRPLYAQAGFADTMRLERWPPEARLRPIEYPSG--AELFVLEGSFRDEDGEFARGAWLRLPPGAAHSPSTAEGCVLYIKEG 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A523IPW0_9BACT (Anti-sigma factor n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A523IPW0_9BACT)

HSP 1 Score: 204 bits (520), Expect = 2.040e-62
Identity = 97/209 (46.41%), Postives = 140/209 (66.99%), Query Frame = 1 
Query:   13 LTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGA---KVEHPCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEG 630
            ++ +TN+M+W PSPS +VWRKR+ L GP E+G+VTS+V Y+AN++F  H HP GEEILVL G++ D  GD  AGTY+LNPEG+ H P SK+G +++VKLRQ+ G +R    ++T+ M WED   PG+AVK LY   ++ E   + KW+AGA   KV +P     E+LI+ G   D + ++ + SWL  P G   +  +  GCE+++K G
Sbjct:   15 VSVNTNKMKWQPSPSGTVWRKRLHLVGPSETGQVTSLVMYEANADFHAHAHPGGEEILVLGGTFSDERGDFTAGTYLLNPEGYEHTPYSKEGGIIFVKLRQYPGDNRKQIVVETQKMDWEDNSCPGIAVKTLYCEQNYPEETSLLKWDAGASPGKVVYPGG--AEILILRGNLQDENGSYGEMSWLRFPVGAEHTPYSPNGCELYIKRG 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A523JHQ7_9DELT (Anti-sigma factor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523JHQ7_9DELT)

HSP 1 Score: 204 bits (518), Expect = 4.100e-62
Identity = 102/212 (48.11%), Postives = 137/212 (64.62%), Query Frame = 1 
Query:    4 SVRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAK---VEHPCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEG 630
            S  +  HT+ MEW PSPS SV RKRV L G  E+G+VTSVVRY  NS F  H HP+GEEILVL+G + D +GD PAG+Y+LNPEGF HAP SK GC+++VKLRQ+GG  R H  L T  +PW+     G+ +K LYS     + MR+E+W  GA    V +      E+L++ G   D   ++++ SWL +PAG T +  +  GCE+++K G
Sbjct:   12 SQSVVMHTSSMEWLPSPSGSVLRKRVHLVGGAEAGQVTSVVRYLENSSFAAHDHPEGEEILVLDGVFSDEHGDWPAGSYLLNPEGFRHAPFSKPGCLIFVKLRQYGGRGRRHVALCTHELPWKSGPHAGIELKLLYSEAGFPDEMRLERWAPGATPGTVSYEGG--AEILVLRGRLEDEQGSYDKLSWLRLPAGATHTPVSPNGCELYLKTG 221
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A536WFI8_9PROT (Anti-sigma factor n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WFI8_9PROT)

HSP 1 Score: 201 bits (511), Expect = 4.530e-61
Identity = 104/208 (50.00%), Postives = 129/208 (62.02%), Query Frame = 1 
Query:    4 SVRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAKVEH-PCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVK 624
            SVR  A T  M+W PSPS SVWRKRV L GP ESG+VTSVVRY+  S F  H HP+GEEILVLEG + D +GD PAGT++LNPEGF HAP S+ GCVL VKLRQ  G  R H  +DT  + WE +  P VA K LY      + MR+E+WE  A +      +  E+ ++EGE  D   A+    WL +P G      +  GC ++VK
Sbjct:   10 SVRAVADTTLMQWTPSPSGSVWRKRVHLVGPPESGQVTSVVRYEPASRFPAHDHPEGEEILVLEGVFSDEHGDWPAGTFLLNPEGFRHAPFSEPGCVLLVKLRQFPGRERRHVVVDTHKLAWEPSSIPAVAHKPLYQQAGFSDLMRLERWEPQADLGIISYEQGAELFVLEGEFADEVRAYSAGCWLRLPVGSEHHPRSAGGCTLYVK 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: A0A534ASB5_9GAMM (Anti-sigma factor n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534ASB5_9GAMM)

HSP 1 Score: 201 bits (510), Expect = 5.660e-61
Identity = 99/210 (47.14%), Postives = 138/210 (65.71%), Query Frame = 1 
Query:    4 SVRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAKV-EHPCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEG 630
            S R+   T  + W PSPS +VWRKR+ L GP E+G+VTS+VRY  +SEF  H HPDGEEILVLEG + D +GD PAGTY+LNPEGF HAP S+ GC L+VKLRQ  G  R H  +DT+N+ W+  +  G A+K LY+   + +SMR+E+W +G++  E   S+  E+ ++ G   D   +++  +WL +P        T  GCE+++KEG
Sbjct:   10 SARVVVDTKTLPWTPSPSGTVWRKRLHLVGPPEAGQVTSLVRYQPHSEFPLHDHPDGEEILVLEGVFSDEHGDWPAGTYLLNPEGFRHAPYSRGGCHLFVKLRQFPGKDRRHVVIDTQNLSWQTRE--GRAIKLLYAQVGYADSMRLERWPSGSRPGELKYSQGAELWVLGGAFEDERGSYDAHTWLRLPPQARHCPRTSGGCELYIKEG 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Match: UPI000688EB27 (cupin domain-containing protein n=1 Tax=Marinobacterium jannaschii TaxID=64970 RepID=UPI000688EB27)

HSP 1 Score: 199 bits (506), Expect = 3.010e-60
Identity = 100/212 (47.17%), Postives = 132/212 (62.26%), Query Frame = 1 
Query:    4 SVRLTAHTNRMEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSRVHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGA---KVEHPCSKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEG 630
            S R+    + M+W PSPS +VWRKR  L G  ESG+VTS+VRYD  + F  H HP GEEILVLEG + D  GD PAG+Y+LNPEGF HAP S +GC+L VKLRQ  G  R H  LDT  + W+ ++  GV VK LY+  D+ E MR+E W   +   ++E+P  +  E  +I GE  D    +   SWL +PAG   +  +  GCE+++K G
Sbjct:    9 SKRVQLDASSMDWQPSPSGTVWRKRFHLVGEGESGQVTSLVRYDPGARFPSHPHPGGEEILVLEGIFSDQQGDWPAGSYLLNPEGFEHAPGSAEGCLLLVKLRQFAGQERRHLALDTAELAWQPSEIKGVLVKQLYADNDYPEQMRLEHWAPDSHCGELEYP--EGAEFFVISGEFEDEQGRYPAGSWLRLPAGSRHNPRSALGCELYIKTG 218
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10842.1787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM74_ECTSI2.210e-13079.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y5TZ85_9PROT5.250e-6749.77ChrR Cupin-like domain protein n=1 Tax=Oceanibacte... [more]
A0A536YCZ3_9PROT2.150e-6451.92Anti-sigma factor n=3 Tax=Betaproteobacteria bacte... [more]
A0A7Y2ICR3_9GAMM4.890e-6447.64Anti-sigma factor n=1 Tax=Woeseiaceae bacterium Ta... [more]
A0A7C2JUM9_9GAMM7.910e-6348.57Anti-sigma factor n=1 Tax=Gammaproteobacteria bact... [more]
A0A523IPW0_9BACT2.040e-6246.41Anti-sigma factor n=1 Tax=Candidatus Dadabacteria ... [more]
A0A523JHQ7_9DELT4.100e-6248.11Anti-sigma factor n=1 Tax=Deltaproteobacteria bact... [more]
A0A536WFI8_9PROT4.530e-6150.00Anti-sigma factor n=3 Tax=Betaproteobacteria bacte... [more]
A0A534ASB5_9GAMM5.660e-6147.14Anti-sigma factor n=2 Tax=Gammaproteobacteria bact... [more]
UPI000688EB273.010e-6047.17cupin domain-containing protein n=1 Tax=Marinobact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10842contigM-pyrifera_M_contig10842:2..5256 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.9
Seed ortholog evalue1.2e-98
Seed eggNOG ortholog2880.D7FM74
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ChrR Cupin-like domain
EggNOG OGs2SA9Z@2759,COG3806@1
Ec32 ortholog descriptionRmlC-like jelly roll fold
Ec32 orthologEc-16_004810.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size785
Cds size627
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10842.1787.1prot_M-pyrifera_M_contig10842.1787.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10842 127..5223 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815594.1617553-UTR-M-pyrifera_M_contig10842:1..1261622815594.1617553-UTR-M-pyrifera_M_contig10842:1..126Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10842 2..126 -
1692277479.2611048-UTR-M-pyrifera_M_contig10842:1..1261692277479.2611048-UTR-M-pyrifera_M_contig10842:1..126Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10842 2..126 -
1622815594.2731478-UTR-M-pyrifera_M_contig10842:5223..52561622815594.2731478-UTR-M-pyrifera_M_contig10842:5223..5256Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10842 5224..5256 -
1692277479.3327076-UTR-M-pyrifera_M_contig10842:5223..52561692277479.3327076-UTR-M-pyrifera_M_contig10842:5223..5256Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10842 5224..5256 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815594.2009861-CDS-M-pyrifera_M_contig10842:126..2571622815594.2009861-CDS-M-pyrifera_M_contig10842:126..257Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 127..257 -
1692277479.2711468-CDS-M-pyrifera_M_contig10842:126..2571692277479.2711468-CDS-M-pyrifera_M_contig10842:126..257Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 127..257 -
1622815594.213514-CDS-M-pyrifera_M_contig10842:534..6501622815594.213514-CDS-M-pyrifera_M_contig10842:534..650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 535..650 -
1692277479.2811487-CDS-M-pyrifera_M_contig10842:534..6501692277479.2811487-CDS-M-pyrifera_M_contig10842:534..650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 535..650 -
1622815594.2234166-CDS-M-pyrifera_M_contig10842:1750..19081622815594.2234166-CDS-M-pyrifera_M_contig10842:1750..1908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 1751..1908 -
1692277479.289856-CDS-M-pyrifera_M_contig10842:1750..19081692277479.289856-CDS-M-pyrifera_M_contig10842:1750..1908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 1751..1908 -
1622815594.2382927-CDS-M-pyrifera_M_contig10842:2705..27521622815594.2382927-CDS-M-pyrifera_M_contig10842:2705..2752Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 2706..2752 -
1692277479.298511-CDS-M-pyrifera_M_contig10842:2705..27521692277479.298511-CDS-M-pyrifera_M_contig10842:2705..2752Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 2706..2752 -
1622815594.2504134-CDS-M-pyrifera_M_contig10842:4538..46231622815594.2504134-CDS-M-pyrifera_M_contig10842:4538..4623Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 4539..4623 -
1692277479.3073905-CDS-M-pyrifera_M_contig10842:4538..46231692277479.3073905-CDS-M-pyrifera_M_contig10842:4538..4623Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 4539..4623 -
1622815594.262661-CDS-M-pyrifera_M_contig10842:5133..52231622815594.262661-CDS-M-pyrifera_M_contig10842:5133..5223Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 5134..5223 -
1692277479.3165584-CDS-M-pyrifera_M_contig10842:5133..52231692277479.3165584-CDS-M-pyrifera_M_contig10842:5133..5223Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10842 5134..5223 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10842.1787.1

>prot_M-pyrifera_M_contig10842.1787.1 ID=prot_M-pyrifera_M_contig10842.1787.1|Name=mRNA_M-pyrifera_M_contig10842.1787.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp
MEWAPSPSPSVWRKRVVLEGPQESGRVTSVVRYDANSEFREHGHPDGEEI
LVLEGSWQDANGDHPAGTYMLNPEGFHHAPSSKDGCVLWVKLRQHGGPSR
VHSRLDTKNMPWEDTDKPGVAVKALYSHPDHDESMRIEKWEAGAKVEHPC
SKLTEMLIIEGEAHDGSEAFEQRSWLSVPAGGTISMTTVTGCEVFVKEGE
WRPPAEQA*
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mRNA from alignment at M-pyrifera_M_contig10842:2..5256-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10842.1787.1 ID=mRNA_M-pyrifera_M_contig10842.1787.1|Name=mRNA_M-pyrifera_M_contig10842.1787.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5255bp|location=Sequence derived from alignment at M-pyrifera_M_contig10842:2..5256- (Macrocystis pyrifera P11B4 male)
AGGAGCGTGCGCCTAACCGCCCACACGAACCGAATGGAATGGGCGCCGTC
TCCGTCTCCCTCGGTCTGGAGGAAACGCGTGGTTCTGGAAGGCCCTCAAG
AGTCTGGCCGTGTTACGTCCGTGGTAAGCAACCATAAGCAACCAACACCA
GCATCCATTCGCACATACCAAGCGCTACCACTCTCAGGGAACGTTTAGTC
TTCATATTAAAGACTAATCGCCCCTTATGTTGCCTTCCAGAGGGGTATGT
GTGTACCTAGCCAGCACTGGGCGCAGAGCGACGCTAACAGGACTCTACTA
CGAGCAGCCGTTTTATTTTCGCGTGGTCGGCCTTCTCCCCTACGAAGGAA
GTGGTCGCATGTTCGTGCCTCAATGTGGCCTATTGTTGGTTCCCGCACCT
AATAAGCTGGTCACCCTGAGTCTTATCATCGGCAGTCACTGAAACCACCC
TCCGAATCCATTGCCACTACTAAAAGCCGGCTCGCCTTGGATCGTATCAT
CGACACCCACCCACTAAAAGCACTCCCCAAAGTAGCGGAGGTGCGCCGAA
ACACCCACCACGAAGAACCGCACGCGCCTGAACGAAGTGTTGCTATACTG
TGCTACATATCGCTCTGGTTACCCGTTGCCCAGGTTCGGTACGACGCCAA
CAGCGAGTTCAGGGAGCACGGCCACCCCGACGGGGAAGAAATCCTCGTGC
TTGAGGGGTCTTGGCAAGGTGACTGACTGACTCCCTTTGCCGCGGTGTGC
TTCGGTAAGACGTTCTCTGGGACGAAACACCTCCCAAGCTTCAGCTACTG
TTGCTGCTGCCGTCGCTGTATGGAGAATGAAGCCCCTTTGCTATCGGTAG
ATGTCTTCGCTTGTGGCTCTTGAGTCGAATCGGCCACATGGAGCTATGAC
TTGTTGCCTCGCTGTGCAGAATCTGTCCCTTTTCTCTCGCCAGACTGCCT
CCTGTACACACGGCTGAGCCATCAAATTCTTACGAGCCCAAAAACGATTC
CCTGGTAAATTGTTATTTCGCCTCCTTCTAACCCGATAAATACTACTATT
ACGGGGGTCCATAGTAAATAGGACCTAATATTGCTAGTAAAAAAAGGTAA
ATATATAGTGTTTTATGTATACCATAGGTACTATTAACTATGAACGCCCG
TAATAGAAGAGCATAGTAATGAGGAAACAAGCATGGTTTGTACGTTAACA
TAGATGATACTATTAATAACATAGATGATACTACGTTTTGTGGGTTCATG
GTGTGTTCTGATTACTCTTGAGTCCCCCCTTAACGATGTGTAGGCCATCT
CACAATATGCAGCCTGGGCTGTTTCATCGACCAATCAATAAACTTCCCAT
AAAATATCCTAGAATGGCAACCTATTCTGGAGACGGTTTCTCGGTTGGTC
TTCGCGGGCGCTTGCACAACAGCCAGCAAGTCCTCGTGCATCCGACCCTC
TTGGTTTTGCTCCGCGCTCCCGACTACTGTACGAGTTGACGAGTTCCTCT
CCCAAGTACGCGTTTCCCCCAACCCAAGTTCGGTGTGAACCATGGCCCAA
GGGAAGTGGCAGATCTCCCGATTGCTCGTCGACCCCCGGACCCGTGGTCC
TTCGCTGTACTGCCGCAAGCTACTGAAACTACGTTTTCTACGGGTGTGAG
TTGTCTGGCTATAATACATCGCCGACTAGTTGTTGGTTGGCATTAGTTGG
CTAGGTATTGCAGTTGCGTGGGGTATTTTTTCGGGGTTGTGCGTCTCTGG
CAGTATCTGACTGGCGCGTTTCGTGGCTCGACGTGTATTTTCTCGTTGAT
TAACTAAACAAAAACTAGGACTTAAGTAGGAATACTTCCGCCACCCAACA
AACAACGACTCAGTTGGTTTATGTCGCCACCCACCTAATAACTTAGGTGG
CCTACCGTAAAGAGCGGTAATTTTCTCGCACAGCATGGGTGCGATCGCTT
TTCAGCGCTCGATTTTTCCAAGGACGGGAAGATTGCCAATACCGAACAAC
ATCAAGGTGTTTTCGGAAAGATCCGGTCGAGAGTGGCCTTCCGAAGATGT
ACATCATGATGTTCGACTTTAAGCACCCTTACCGTTGTCGATAGAAAACG
AGCGCCGGTTGTTTAAAACGATCACACCCCTATGCGAAGTCAACGCTTTT
TACGGTACTTCACCACCGCACTACGGTAGTAACTACCAGTACCTGGTATT
AATAGTTGGTTTAATTAGCCACCCAACAAACAAAAGCCGTGAACGTAGTC
AAGCCAAGGCATGCCTTACTCGCAGCCCTAGCATTTTCCATTGTCAATGC
CTGTTGCGCCGTTCTTTGTACCGTCATGTTTACCGTTCTTTGCACCGGTA
TTTGCAACGTTCTTTGTACCGTTTGTTGTACCGTTCTTTGCATCGTTCTC
TGCACCGTTCTTTGTCCCTTCTTCCCTTTTCGACGTGGCGTGCCTGTGCA
TGATGAACACTCGTGCTCCCTGAATTAACACTCGGCCAAACCTCGCGGCT
GAAGATGCAAACGGCGACCACCCGGCGGGGACGTACATGCTCAATCCGGA
GGTAACACCACTTGTCTCTACGAACGTGGGAGCGAAACTTTCATACGTCG
AACATATCTCGTATCTACAGATGGATCATCTAGACCTGCCTCTATGAGAT
CTTGTGCAGGACCTGCAAGAGTACAGAAAACGTGCTTCAGATTAATGCCG
ATTGTACGGCTCCCACCAGGTAACATGAGCCAGATCATACAGATGAAGGA
TTTAACTGCCGTGAAAGAGGTAGATTCTCTAGTGGGAATCCATGATCTCG
TCTGAGGTAAGCTTTGGCTCGTACGTTTCATGACAAAAAAACAACGTTTT
TTTCTGCGTGGCGGTGTTCTGTCCACAAATGGCTACAATCGGCATGAGTT
TTGCGCTGTGCAACGGTGGTGTAGATCCCGTCCAATTGGGGCCCCCGGTT
GTGAACACACGGCATGAAGTCAAAGTTGAAGTTCCTCAGCGGAACCATGA
CAAAAAAATGCAATAGAACCTGCTTAACCCCACGCTTGGAAGGCGCTAGT
TTGTGCCGATTCATAGTTCGGTATAGCAATCGGTAGGTACAGCCCCCCCC
CCTCTCCCCGATACTCCCCGTTCTTGTGGCATACACTTCATCCGGATTTG
CTGGGCTTGTCTTCCAGGGTAGACAGCGCTGTCGAGGCCTACATTAAGAT
GAATTCATTGTCGTGCCCTCGCACGGTTCTATTTTGATTTTTTGCACCGA
TCCGAATCCCCCCGACCTCCCACCCATCCACTCACCCAGCCAGTCACCCG
CTCACTCACCCACCAACCCACCCACCCCCCCTCCATCCCATCCTGCAGGG
TTTCCATCATGCGCCCTCCTCCAAGGACGGCTGTGTCCTCTGGGTCAAAC
TGCGGCAGCACGGTGGCCCTTCCCGGGTGCACTCCCGCCTTGACACCAAG
AACATGCCGTGGGAGGACACGGACAAGCCGGGGGTGGCGGTCAAGGCGCT
GTACTCGTAAGTTGTTTGTCTTGTGGCAGTAGGTAGGTTTTGTTTCGAGG
AAATACTGGCAAGCGTGCACGCCATCATATATCCGCTATTGTTCCCGGTG
CCATCTGCTTGCTGTGGAGCTCGCAAGTACCGTTTCGGCTTGGCCCCTTT
GAAGGAACCTTGGCTATTGACATGATATTTTTGTGTTTTTTTCGCGAACG
CCCTGCTCAGCCGTCGAATACGCTATTGTTGGCGACGCTGGACCTGTGTG
ATTTACCTAGGGCCATTATTGTCAAACTACTTTTTTTTCTGATTTTCCTT
TTTTTTCTTGAAAAATTAAAAGAGGAAAAAGAGGAGAGGAAAAAAAGGAA
CAGGAGGGAACATTTCTTGAATCAAGAAATGCTTAACCGAGGTGAAAAAA
TGGGGGACGTTTTGATATCGTTTTTTAGGAATAAAAAATCAAAGAAAATC
AGGAAATTGGGGACAAAACACTTTCGATAGTAACGACTCTAAGTACCGCA
TTACAGAACCCTCGTTTTCCCCCTGTCGAAGTTCGGGAGAAAGGAAGTAG
CGGCAGCATCCGTGTCGCCATATGCCGGTCATACTCTACTCGAAACAATA
TCAAAGTAGTGGAAGCGCACGGACGCCGGTGCTTCAATTCCCCCCCCCGA
CCCCTCCACGTCGCTGACCTGAGTTATTAATTGTAGTGTACCAGGAACGA
GAAAAATCGGATTCGCTATGTGCCACGTGCCTCTTGATGTGTCACGAGAA
TGACCAATGATGAGAGTGCGTGATTGGCCAGTGCAGGCGGGGGATATGCG
GCTGGATAGTGGTGGCGGTACTCAAGGTGTTTTATTACGATGCGAATGTC
TTATTTTGGCGTCGCGAAACAAATAGGGACCCACCCTACGAGTTTTACCT
CAAGCGTTCACCCATACGCCGTCTCCCAACGCCCACACAAGTTGACGGCA
GTTTCAAACATCCTGCTGCGTGAGTTCCTTTCGTAGCGACAAATATACTG
TACTGTTTGGTATATATATAGGTTTGCGATGCTAATTGTACCGTGAAAAA
AAAAATGAATGACATCAGCACCCATCGCTGTCCAATTTTGTGCCCTTCCC
TCGAAGGCACCCTGATCACGACGAGTCCATGCGCATCGAAAAGTGGGAAG
CTGGAGCCAAGGTGGAGCACCCGTGCTCGAAGCTTACCGAAATGCTGATC
ATCGAAGGAGAGGCACACGACGGTGAGCTTTGTGGGCTTTTATCTGGCCC
TGGTCCTCCTCGCCCACTCGATCCGCGCCATGATTAAATGTGTAAGAGGG
TTGCTATCAATAAATGAGCTGATTACGACAGCAAGAGTTGTACTTTTTGG
ACCCTAACCAGTCATGACTGACGGTGTCATTTATACCTGAGGCCGGCATG
GTCCAACGTGGTAAGGTATATATATGTATGATCCGATTGATCCGCTTCGA
TCGCTATCCCCACTCGAAACATCTTTGGTGTCATTGTCGACCCCCCCAGG
AAGCGAGGCTTTCGAACAGCGGAGCTGGCTTAGCGTACCCGCGGGGGGCA
CGATTTCGATGACCACGGTCACCGGGTGCGAGGTGTTCGTGAAGGAGGGG
GAGTGGCGCCCACCCGCCGAGCAAGCCTGAAGCCGTCGAGACTTTAGTCG
CCTAGCGACCACAAGCGGAGAATCAAATCACCCCCCCCAGAACGCCCAGC
CAATGTGTTAATGGGGGAACGCCCCAAGTAAATGTATTGATGGGGGAGGG
GTTGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10842:2..5256-

>mRNA_M-pyrifera_M_contig10842.1787.1 ID=mRNA_M-pyrifera_M_contig10842.1787.1|Name=mRNA_M-pyrifera_M_contig10842.1787.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig10842:2..5256- (Macrocystis pyrifera P11B4 male)
ATGGAATGGGCGCCGTCTCCGTCTCCCTCGGTCTGGAGGAAACGCGTGGT
TCTGGAAGGCCCTCAAGAGTCTGGCCGTGTTACGTCCGTGATGGAATGGG
CGCCGTCTCCGTCTCCCTCGGTCTGGAGGAAACGCGTGGTTCTGGAAGGC
CCTCAAGAGTCTGGCCGTGTTACGTCCGTGGTTCGGTACGACGCCAACAG
CGAGTTCAGGGAGCACGGCCACCCCGACGGGGAAGAAATCCTCGTGCTTG
AGGGGTCTTGGCAAGGTTCGGTACGACGCCAACAGCGAGTTCAGGGAGCA
CGGCCACCCCGACGGGGAAGAAATCCTCGTGCTTGAGGGGTCTTGGCAAG
ATGCAAACGGCGACCACCCGGCGGGGACGTACATGCTCAATCCGGAGATG
CAAACGGCGACCACCCGGCGGGGACGTACATGCTCAATCCGGAGGGTTTC
CATCATGCGCCCTCCTCCAAGGACGGCTGTGTCCTCTGGGTCAAACTGCG
GCAGCACGGTGGCCCTTCCCGGGTGCACTCCCGCCTTGACACCAAGAACA
TGCCGTGGGAGGACACGGACAAGCCGGGGGTGGCGGTCAAGGCGCTGTAC
TCGGTTTCCATCATGCGCCCTCCTCCAAGGACGGCTGTGTCCTCTGGGTC
AAACTGCGGCAGCACGGTGGCCCTTCCCGGGTGCACTCCCGCCTTGACAC
CAAGAACATGCCGTGGGAGGACACGGACAAGCCGGGGGTGGCGGTCAAGG
CGCTGTACTCGCACCCTGATCACGACGAGTCCATGCGCATCGAAAAGTGG
GAAGCTGGAGCCAAGGTGGAGCACCCGTGCTCGAAGCTTACCGAAATGCT
GATCATCGAAGGAGAGGCACACGACGGCACCCTGATCACGACGAGTCCAT
GCGCATCGAAAAGTGGGAAGCTGGAGCCAAGGTGGAGCACCCGTGCTCGA
AGCTTACCGAAATGCTGATCATCGAAGGAGAGGCACACGACGGAAGCGAG
GCTTTCGAACAGCGGAGCTGGCTTAGCGTACCCGCGGGGGGCACGATTTC
GATGACCACGGTCACCGGGTGCGAGGTGTTCGTGAAGGAGGGGGAGTGGC
GCCCACCCGCCGAGCAAGCCTGAGAAGCGAGGCTTTCGAACAGCGGAGCT
GGCTTAGCGTACCCGCGGGGGGCACGATTTCGATGACCACGGTCACCGGG
TGCGAGGTGTTCGTGAAGGAGGGGGAGTGGCGCCCACCCGCCGAGCAAGC
CTGA
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