mRNA_M-pyrifera_M_contig108416.1785.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A1Y1ITC0_KLENI (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ITC0_KLENI) HSP 1 Score: 180 bits (456), Expect = 1.410e-50 Identity = 93/178 (52.25%), Postives = 121/178 (67.98%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG--EAA---ILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A++VRAT + ML QL +LR NIQ+ CLRVIG+LRRL V+ E +R+ FL+CREAWLA + N Y Y+ +L D R LFD++ QYRAIFA+ EAA +++SW +H+V +++ L + L RIT+G VLD CMY GMSL RVG+DFRGLLPP+FEA V LFS Sbjct: 175 AEEVRATTESMLSQLLQRLRSNIQLPECLRVIGYLRRLAVFSEHDMRLQFLRCREAWLADIIDDLDPSNPYDYVKRLTDHHRVHLFDVVMQYRAIFADDTSNQEEAADGGLVYSWAMHRVTAYLTVLQHMLPRITEGSPLSNVLDHCMYCGMSLGRVGLDFRGLLPPLFEACVFGLFS 352
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A397ZY26_BRACM (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397ZY26_BRACM) HSP 1 Score: 173 bits (439), Expect = 6.180e-50 Identity = 86/178 (48.31%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L QL +LR NIQ+ CLR+IG+LRR+ V+ E ++R+ FL+CREAWL + +NAY YL +++ R LFD++ QYRAIFA+ G + +L SW +HQ+ S ++ L L IT+GGS +LDQCMY M L VG+DFRGLLPP+FE VL LFS Sbjct: 120 AAEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFGEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLKTLKIMLPEITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFS 297
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A7J7MQT3_9MAGN (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MQT3_9MAGN) HSP 1 Score: 177 bits (448), Expect = 1.650e-49 Identity = 88/178 (49.44%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L L +LR NIQ++ CLR+IG+LRR+ V+ ES++R+ FLKCREAWLA + +N Y YL +V+ R LFD++ QYRAIFA+ G + +L SW +HQ+ S ++ L L +IT+GGS +L+QCMY SL VG+DFRGLLPP+FEA VL LFS Sbjct: 175 AAEVRQTTHSLLSHLLQKLRSNIQLSECLRIIGYLRRISVFSESEMRLQFLKCREAWLAGILDDLDQRNVYEYLKAMVNCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWSMHQITSHLKILKAMLPKITEGGSLSNILEQCMYCATSLGGVGLDFRGLLPPLFEAAVLNLFS 352
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A2P2KVZ4_RHIMU (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KVZ4_RHIMU) HSP 1 Score: 172 bits (436), Expect = 1.820e-49 Identity = 85/176 (48.30%), Postives = 116/176 (65.91%), Query Frame = 1 Query: 7 DVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 +VR T +L QL +LR NIQ+ CLRVIG+LRR+ V+ E ++R+ FL+CREAWL + +NAY YL +++ R LFD++ QYRAIFA+ G + +L SW +HQ+ S ++ L L +IT+GGS +LD CMY M L+ VG+DFRGLLPP+FE VL LFS Sbjct: 177 EVRQTTQSLLSQLLQKLRSNIQLPECLRVIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQRNAYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEESNDGGLLFSWAMHQITSHLKTLKFMLPKITEGGSLSNILDLCMYCAMGLNYVGLDFRGLLPPLFEEAVLNLFS 352
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A0D2S7J5_GOSRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2S7J5_GOSRA) HSP 1 Score: 172 bits (437), Expect = 2.780e-49 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L QL +LR NIQ+ CLR+IG+LRR+ V+ E ++R+ FL+CRE WL + +NAY YL ++ R LFD++ QYRAIFA+ G + ++ SW +HQ+ S ++ L L +IT+GGS +LDQCMY M L VG+DFRGLLPP+FE VL LFS Sbjct: 185 AQEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCRETWLTGILEDLDQRNAYEYLKGMISCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLIFSWAMHQITSHLKTLKVMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFS 362
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A251TMT1_HELAN (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TMT1_HELAN) HSP 1 Score: 176 bits (446), Expect = 3.580e-49 Identity = 87/178 (48.88%), Postives = 118/178 (66.29%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L QL +LR NIQ+ CLR+IG+LRR+ VY E ++R+ FL+CRE+WL+ + +NAY YL +V+ R LFD++ QYRAIFA+ G + +L SW +HQ+ S ++ L L +IT+GGS +LDQCMY M L VG+DFRGLLPP+FE VL LFS Sbjct: 180 ASEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVYSEYEMRLQFLRCRESWLSGILDDLEQRNAYEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQISSHLKTLKIMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFS 357
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: UPI001262B122 (conserved oligomeric Golgi complex subunit 8-like n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001262B122) HSP 1 Score: 175 bits (444), Expect = 6.010e-49 Identity = 86/178 (48.31%), Postives = 117/178 (65.73%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L QL +LR NIQ+ CLR+IG+LRR+ V+ E ++R+ FL+CREAWL + +NAY YL +++ R LFD++ QYRAIFA+ G + +L SW +HQ+ S ++ L L +IT+GGS +LDQCMY M L VG+DFRGLLPP+FE VL LFS Sbjct: 174 ASEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITSHLKTLKIMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFS 351
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A1P8BAA7_ARATH (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Brassicales TaxID=3699 RepID=A0A1P8BAA7_ARATH) HSP 1 Score: 173 bits (439), Expect = 6.820e-49 Identity = 85/178 (47.75%), Postives = 117/178 (65.73%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L QL +LR NIQ+ CLR+IG+LRR+ V+ E ++R+ FL+CREAWL + +NAY YL +++ R LFD++ QYRAIF++ G + +L SW +HQ+ S ++ L L +IT+GGS +LDQCMY M L VG+DFRGLLPP+FE VL LFS Sbjct: 177 AAEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVFGEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFSDDTSGSEENYDGGLLFSWAMHQITSHLKTLKIMLPKITEGGSLSNILDQCMYCAMGLGGVGLDFRGLLPPLFEEAVLNLFS 354
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: M1A991_SOLTU (Conserved oligomeric Golgi complex subunit 8 n=14 Tax=Solanaceae TaxID=4070 RepID=M1A991_SOLTU) HSP 1 Score: 174 bits (442), Expect = 1.360e-48 Identity = 87/178 (48.88%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L QL +LR NIQ+ CLR+IG+LRR+ V++E ++R+ FL+CR+AWL+ + +NAY YL +V+ R LFD++ QYRAIFA+ G + +L SW +HQ+ S +R L L +IT+GGS +LDQCMY M L VG+DFRGLLPP+FE VL LFS Sbjct: 178 AAEVRQTTQSLLFQLLQRLRSNIQLPECLRIIGYLRRIGVFNEYEMRLQFLRCRQAWLSGILDDLDQRNAYEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGREENYDGGLLFSWAMHQISSHLRTLKMMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFS 355
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Match: A0A2U1NMW8_ARTAN (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NMW8_ARTAN) HSP 1 Score: 175 bits (444), Expect = 1.360e-48 Identity = 87/178 (48.88%), Postives = 118/178 (66.29%), Query Frame = 1 Query: 1 ADDVRATADVMLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAEEAKIPSQNAYTYLNKLVDQTRGSLFDIITQYRAIFAEGAKG-----EAAILHSWLVHQVRSFMRQLTNGLARITDGGSGHQVLDQCMYLGMSLSRVGVDFRGLLPPVFEAHVLKLFS 519 A +VR T +L QL +LR NIQ+ CLR+IG+LRR+ VY E ++R+ FL+CRE+WL+ + +NAY YL +V+ R LFD++ QYRAIFA+ G + +L SW +HQ+ S ++ L L +IT+GGS +LDQCMY M L VG+DFRGLLPP+FE VL LFS Sbjct: 228 AAEVRQTTQSLLSQLLQKLRSNIQLPECLRIIGYLRRIGVYSEYEMRLQFLRCRESWLSGILDDLDQRNAYEYLKGMVNCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQIASHLKTLKIMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPPLFEEAVLNLFS 405 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108416.1785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108416.1785.1 >prot_M-pyrifera_M_contig108416.1785.1 ID=prot_M-pyrifera_M_contig108416.1785.1|Name=mRNA_M-pyrifera_M_contig108416.1785.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp MLEQLHSQLRGNIQVTACLRVIGFLRRLEVYDESQLRVSFLKCREAWLAAback to top mRNA from alignment at M-pyrifera_M_contig108416:10..528+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108416.1785.1 ID=mRNA_M-pyrifera_M_contig108416.1785.1|Name=mRNA_M-pyrifera_M_contig108416.1785.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig108416:10..528+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108416:10..528+ >mRNA_M-pyrifera_M_contig108416.1785.1 ID=mRNA_M-pyrifera_M_contig108416.1785.1|Name=mRNA_M-pyrifera_M_contig108416.1785.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig108416:10..528+ (Macrocystis pyrifera P11B4 male)back to top |