mRNA_M-pyrifera_M_contig108400.1781.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108400.1781.1 vs. uniprot
Match: A0A6N9YKB9_9ACTN (Peptidoglycan-binding protein n=1 Tax=Phytoactinopolyspora alkaliphila TaxID=1783498 RepID=A0A6N9YKB9_9ACTN) HSP 1 Score: 67.8 bits (164), Expect = 4.980e-10 Identity = 53/180 (29.44%), Postives = 88/180 (48.89%), Query Frame = 1 Query: 1 GYTPNLPSFDAVSALEAAQDRVRGAQESLRIAEDAVANSGVGQSTIARTEAAAAVATAQNQYNLEPTAENAAALRTAEATEIVVNREQDLAIGNAAGQVEIARALRAEGLENDNAEGAGRQRDDAREELADAIDDLDRLDSQIGVIFPATELVFLPSLPREVQVLTIAPGRTVDGPVMAV 540 GY P P + +AL+AA D VR A++ + AE +A++ G + A QN + + A A + A+ +A Q+++A+A + + L+ + G + AR+ LADA D D ++ G PA+E+VF+PSLPR V + + G+ DG VM++ Sbjct: 160 GYEPPAPDPEIQAALDAADDAVRSAEDDVANAEAMLASASAGPGNAEKIAA-------QNDVD-----------QAARALQQAKEDGDRPAVADAEAQLKLAKANQEDLLKGPDTSGERAALNAARKRLADAQSDRDAAAAEAGTPLPASEVVFVPSLPRRVDAVNVKRGQEADGAVMSI 321
BLAST of mRNA_M-pyrifera_M_contig108400.1781.1 vs. uniprot
Match: A0A511FGC2_9CELL (Uncharacterized protein n=3 Tax=Cellulomonas hominis TaxID=156981 RepID=A0A511FGC2_9CELL) HSP 1 Score: 58.5 bits (140), Expect = 7.970e-7 Identity = 62/190 (32.63%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 1 GYTPNLPSFDAVSALEAAQDRVRGAQESLRIAEDAVANSGVGQSTIARTEAAAAVATAQNQYNLEPTAENAAALRTAE----------ATEIVVNREQDLAIGNAAGQVEIARALRAEGLENDNAEGAGRQRDDAREELADAIDDLDRLDSQIGVIFPATELVFLPSLPREVQVLTIAPGRTVDGPVMAV 540 GY+ S +A L+ A+ VR AQ + ++ A++++ A A ++A A A +AAAL A A+E V R DLA +A QV +ARA+RA+ + + A A++ LADA + L + + I PA+E+VFL +LPR V +++ G TVDG VM+V Sbjct: 198 GYSAPAASDEAAETLKMAERGVREAQAEVTRSQGALSSN-------AGAPGAGSIAEADATIRSRERARDAAALAVARLADTCAADQSASECVAARN-DLA--DAEDQVAVARAMRADLDKAPDTSDARAGVTAAQQALADAREALTQAQQDVLTILPASEVVFLETLPRRVDAVSVKRGGTVDGAVMSV 377
BLAST of mRNA_M-pyrifera_M_contig108400.1781.1 vs. uniprot
Match: UPI001C2071FC (hypothetical protein n=1 Tax=Phytoactinopolyspora halotolerans TaxID=1981512 RepID=UPI001C2071FC) HSP 1 Score: 57.8 bits (138), Expect = 1.470e-6 Identity = 53/180 (29.44%), Postives = 82/180 (45.56%), Query Frame = 1 Query: 1 GYTPNLPSFDAVSALEAAQDRVRGAQESLRIAEDAVANSGVGQSTIARTEAAAAVATAQNQYNLEPTAENAAALRTAEATEIVVNREQDLAIGNAAGQVEIARALRAEGLENDNAEGAGRQRDDAREELADAIDDLDRLDSQIGVIFPATELVFLPSLPREVQVLTIAPGRTVDGPVMAV 540 GY P D +AL+AA + + A++ +R AE A+ + G S + +A V TA+ Q T +A A+ AE Q+++AR E + D AR L +A + D+ + G PA+E+VF+PSLPR V + + G VDG VM++ Sbjct: 171 GYEPPAVDPDIQAALDAADENLDAAEDEVRNAESALQAASKGASEAEKLQAQHDVDTAERQLEQAKTDGDADAIADAEL------------------QLKLARTNLDEVEAGPDVSAERAALDAARSRLTEAQQERDQAAVRAGTPLPASEVVFVPSLPRRVDEVNVGRGDEVDGAVMSI 332
BLAST of mRNA_M-pyrifera_M_contig108400.1781.1 vs. uniprot
Match: UPI00047DB056 (hypothetical protein n=1 Tax=Jiangella gansuensis TaxID=281473 RepID=UPI00047DB056) HSP 1 Score: 55.8 bits (133), Expect = 6.470e-6 Identity = 57/180 (31.67%), Postives = 80/180 (44.44%), Query Frame = 1 Query: 1 GYTPNLPSFDAVSALEAAQDRVRGAQESLRIAEDAVANSGVGQSTIARTEAAAAVATAQNQYNLEPTAENAAALRTAEATEIVVNREQDLAIGNAAGQVEIARALRAEGLENDNAEGAGRQRDDAREELADAIDDLDRLDSQIGVIFPATELVFLPSLPREVQVLTIAPGRTVDGPVMAV 540 GY P P A + LEAAQD V A+ +G G + R A AVA A+ AAA + + T I A QV +A A + L+ + D A+++LA A +D D + G PA+E+VF+PSLPR V + + G V+G VM+V Sbjct: 172 GYEPPEPDPQAAAELEAAQDAVDXXXXXXXXXXXALDAAGAGPADAERVAAENAVAQAKRDL--------AAAKKQGDRT----------LIAQAEDQVRLAEAQLDDLLDGRDTSVEEAALDTAKDQLAAAREDRDTAAASAGTPLPASEVVFVPSLPRRVDEVHVRRGGQVNGAVMSV 333
BLAST of mRNA_M-pyrifera_M_contig108400.1781.1 vs. uniprot
Match: UPI0018F1E405 (hypothetical protein n=1 Tax=Actinotalea solisilvae TaxID=2072922 RepID=UPI0018F1E405) HSP 1 Score: 53.1 bits (126), Expect = 5.540e-5 Identity = 66/186 (35.48%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 1 GYTPNLPSFDAVSALEAAQDRVRGAQESLRIAEDAVANSGVGQSTIARTEAAAAVATAQNQYNLEPTAENAAALRTAEATEIVVNREQDLAIG----NAAGQVEIARALRAEGLEN-DNAE------GAGRQRDDAREELADAIDDLDRLDSQIGVIFPATELVFLPSLPREVQVLTIAPGRTVDG 525 GY ++ A++AA+D VR A+E + A+ A+ + G S R A V +A Y LE AA AEAT +Q A G A G++++A A +AEGL D AE A R DDARE+LA+A +D + PA+E+V+L SLPR V + + G TV G Sbjct: 172 GYEAPTGGEESDLAVQAARDGVRSAEEQVGSAQRALTTARAGLSDKDRVALQAEVDSAT--YALE-----AARHECAEATG---TPDQARACGPSVVEADGRLKVAVAAQAEGLAAPDTAEEQAAVASAQRALDDAREQLAEAQED-------VLTPLPASEVVYLSSLPRRVDDVAVRRGSTVSG 340 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108400.1781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108400.1781.1 >prot_M-pyrifera_M_contig108400.1781.1 ID=prot_M-pyrifera_M_contig108400.1781.1|Name=mRNA_M-pyrifera_M_contig108400.1781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp GYTPNLPSFDAVSALEAAQDRVRGAQESLRIAEDAVANSGVGQSTIARTEback to top mRNA from alignment at M-pyrifera_M_contig108400:4..612+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108400.1781.1 ID=mRNA_M-pyrifera_M_contig108400.1781.1|Name=mRNA_M-pyrifera_M_contig108400.1781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108400:4..612+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108400:4..612+ >mRNA_M-pyrifera_M_contig108400.1781.1 ID=mRNA_M-pyrifera_M_contig108400.1781.1|Name=mRNA_M-pyrifera_M_contig108400.1781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig108400:4..612+ (Macrocystis pyrifera P11B4 male)back to top |