mRNA_M-pyrifera_M_contig1084.1780.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1084.1780.1 vs. uniprot
Match: D7FWC6_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI) HSP 1 Score: 999 bits (2584), Expect = 0.000e+0 Identity = 729/1626 (44.83%), Postives = 864/1626 (53.14%), Query Frame = 1
Query: 1 LSGADDIQTVVEKLHVPHASKSGVNVIITDLEPKVPKLMEFLRSRSLRPGLGKLPIVSVIVVIDAGDPRPEMLASAMDSGVDAVLQRPLRKSVVTACVGEVLRRQANIEFVYKDVVGEVETFNYPRFVLEGFHFDGVGE-GSVSGG--DGDGGFNEAMVDAVRTYTLQASV-SRSGSMTTIGSGGWAQDG--------AGESQLDAIKQKRFSCSEHTHCIVSTVHTSAETPLSETLPAEPDQGAGRGETSQFGASHAAVARGTGKGDVVAVLQGSPVKLSSASLRPRLYLSPGDKGYVGGSS------------GKRDGGGGKGGSATGDLEGADILVDCERQVSNELGPFVKRKVPPLGDPSTSSGLSKTRLATTMRLVENTFAFTRGQNAEQRCVVNGQILVETTNGYVPPEYPPP--LTHRVLHAPTA--------LRLERDA----------WSMVKGRRQATNEHAPPPSPPSPLHSS*EGVRRIGIRLKSRRLEDDNPLSQKNMFRASGTQGRRAATRQGMFDEVSRSKHTNRDPTDIASAASLTCALGVGVKGEAAAKLVIGRMMRNRRLNLIAKGKSTAGGGGITRGEGQGGVGEDGGRCYRGG-TRNMEAVSGMDKRQKGRSRNAAXXXXXXXXXXXIGGQTGE--GEGLFKAVLSSMAKDRLRSGLEVIKHNPPDMLRRGFVEIEPTKHGRTALGCHLMKGWEEQKAGSRRRALGHYRRAVASEPENVDALFCKAVVSAQMGELFDALNDFSAGINFRLAEV-RTIDDMRSGSXXXXXXXXXSAGTKCTEKWTGVGREXXXXXXXXXXXXXXXXXXXXXSAGLAALYFNRALVHVCLGDDRSALDDLGRALARDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQVQPCIVLFFAAETTGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTDDXXXXXXXXXYKKPGDSADSLRKGCKSWRHRDSKVKDAVGVPA--GIEEGGRGDSHMLDNHKNSSQGRRQRCSVAGGLETRLNVRERALVEETGINTAENLQLGDATGVNPGGFGKQQPPHRSVFQGGGDIVETHRRS---GGVRSDVRVPTS----SVEDGLGGPRDRAHT-VNTVSLRQLDVGTVSLPASTDDVSDDAQQVEEWSAQFRDKRLAEHDSRRDALLRELLSPTSDGGDVPTTMTAGEENGRTVASSPVRRTGRCEESG-VGATLGEFKTSVGLSAKGDLFDDLFCRPSRLDEALTTEPGRRTPQQASWNSNRVSCIVEALSASPAFFGMPLEAMKEVGKVVEYRVLEKMASAFLQGEELDAMVIILSGRVAVKLRRADLSVVTSDELGPGDTFGEASLLDERRFLDRT-------------PQGDGGHDV-------------ASSP-----------------PNVAGEGKSTFVGAGGPXXXXXXXXXXRAAGRSMETYQTLEPTRLVLVLRDDFYRMPGLLAHCFAALKRRLTAIKRCGLFSGWATEDLMRLARMSKVHRHSSKQVLLMQRKEPSHLHIMLSGTCTVTKYPDRLAAVQRNINEIGAALYRINSKYTYHREVRAKI 4572
+ GADDI VVEKLHVPHAS+SGVN IITDL+PK+PKLME LR RSLRPGLGKLPIVSVIVV+D D RPE+LASA++SGVDAV++RPL +S T+CVGEVLR+ A++EFVYKDVVGEVETFNYPRF+LEGFHF GVGE GSV GG +GD FNE DAVRTYT +AS S +GS+TT+G+GGWAQDG AG+S+ ST T A G G ++ + AA AR GK V+ ++G VK++S SLRPRLYL GDKGYVGG GKR G G G D +RQ N+ G V R+V ++ Q G+ T+ + P P P T HAPTA LR +R+A + GR N PP + + + + EG R +++ R ++ NP+SQK +F A+GTQGRRAATR GMFDEV R TN +PT++AS +L ALGV V GEAAA+LVIGRM++NR+ + S G G +RG G G R RGG T +G D+ +G S A GG +G GEG+FK VLSSMAK RLR GL+ IK NP D+LRRGFVE+EPTKHG TALGCHL+KGWEEQ G++ RALGH+RRAVASEPENV+ALFCKAV+SAQ+ ELFDAL DFSA I+F+L E R R S +A XXXXXXXXXXXXXXXXXXX + LA LY NRALVHVCLGDD SALDDL RA+ARDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQ+ E T A S ++ + PA +++G S L+ ++ AG E EE G T G++ GG G + G V RS G R+ V +VE G R+ ++ L + G V + A S + + + E DGG G T + TG G GA+L EFK S+GLSAKG+LFDDLFCRPS LDEALTTEPGRRTP+Q V +VEAL+A PAF G+ E M E+G VEYRVL+KM++AFLQGEE+DAMV+ILSGRVAVKLRRAD SVVT+DELGPGDTFGEA +LDE R + QG GG D + SP P G G G GG GRSMETYQTLEPTRLVL+L+ DFYRMPGLL HC A KRRL AIK CGLF GW EDLMRL RMS++HRH SK VLLMQRKEPSHLHI+LSG CTVTKYPDRL+AVQR INEIGAALYRI SKY+YHR+VR K+
Sbjct: 100 VQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMESLRLRSLRPGLGKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLERSSFTSCVGEVLRKHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETGSVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTVGTGGWAQDGIVSPNGGNAGQSEAPLPTPXXXXX------XASTTATDAT---------------GFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYLYTGDKGYVGGGGSTMNANTDSRDGGKRSSAGCSNGGVGGSXXXXXXXGDRDRQ--NQGGTEVDRRV---------------------------------ESERQAWQSKGRTAAAGTSSSLRPSVPTPGSFTTSAGHAPTAAGHGAGSGLRAQRNARIGPGFPPGVGIIPPGRALPQNRTRPPKTTGTAVGPAAEGSWRAAT-VRAPRPDEGNPVSQKKIFNATGTQGRRAATRAGMFDEVLRRDQTNANPTEMASTGNLRSALGVVVTGEAAARLVIGRMIQNRKARMAKTAMSNGGEDG-SRGAGACAYGPISKRAPRGGLTGGRSMAAGRDRGGRGGSAGALKRKPVKGVSTSAGGVSGGLLGEGIFKTVLSSMAKKRLREGLQEIKSNPLDLLRRGFVEVEPTKHGSTALGCHLIKGWEEQTNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALQQRGASNTKRPSNGVTASGSAGXX------XXXXXXXXXXXXXXXXXXXXKSNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQI---------LEQTAADR-------------------------------------------------------------------------------------------------------SATQETISRPATPAVKDGPHTGSIALNGSPTTA-------GAAGAAEAT------GAPEEKGGATRPWAVKSHGKGISSGGGG--------LVPDGSAAVHARARSLPSAGARTTTAVVAEPGVGTVEKPTAGHREHVQRCASSPLLERTSHGNVGVGAVIPTPGK--------SLLLEENKTPASPGHGGRSIEEHKGTAQDGGSAAAAAD-GPATSSTRTGTATMTTGYSLPKGRQGASLVEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQ-------VVHVVEALAACPAFDGLEKEVMIEIGNAVEYRVLDKMSAAFLQGEEIDAMVVILSGRVAVKLRRADFSVVTADELGPGDTFGEACMLDEHRITAQRRRNSNCNENACEGAQGSGGADKPPGSPTSPREVNDSESPRVVVPKDKGTPEYQPEEPLTEGAGLPGRGGTGGRARVGSGSGSSPGTGRSMETYQTLEPTRLVLILKRDFYRMPGLLKHCAHAFKRRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKEPSHLHIVLSGACTVTKYPDRLSAVQRKINEIGAALYRIKSKYSYHRDVRTKV 1512
BLAST of mRNA_M-pyrifera_M_contig1084.1780.1 vs. uniprot
Match: A0A6H5K1M1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M1_9PHAE) HSP 1 Score: 673 bits (1736), Expect = 3.860e-213 Identity = 559/1450 (38.55%), Postives = 688/1450 (47.45%), Query Frame = 1
Query: 769 VVAVLQGSPVKLSSASLRPRLYLSPGDKGYVGGSS------------GKRDGGGGKGGSATGDLEGADILVDCERQVSNELGPFVKRKVPPLGDPSTSSGLSKTRLATTMRLVENTFAFTRGQNAEQRCVVNGQILVETTNGYVPPEYPPP--LTHRVLHAPTALRLERDAWSMVKG---RRQAT--------------------NEHAPPPSPPSPLHSS*EGVRRIGIRLKSRRLEDDNPLSQKNMFRASGTQGRRAATRQGMFDEVSRSKHTNRDPTDIASAASLTCALGVGVKGEAAAKLVIGRMMRNRRLNLIAKGKSTAG---GGGITRGE-GQGGVGEDGGRCYRGGTRNMEAVSGMDKRQKGRSRNAAXXXXXXXXXXXIGGQTGE--GEGLFKAVLSSMAKDRLRSGLEVIKHNPPDMLRRGFVEIEPTKHGRTALGCHLMKGWEEQKAGSRRRALGHYRRAVASEPENVDALFCKAVVSAQMGELFDALNDFSAGINFRLAEVRTIDDMRSGSXXXXXXXXXSAGTKCTEKWTGVGREXXXXXXXXXXXXXXXXXXXXXSAG-----LAALYFNRALVHVCLGDDRSALDDLGRALARDTRNITYRSNRALILRRVGDFRGAQQDYSRIRALQVQPCIVLFFAAETTGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTDDXXXXXXXXXYKKPGDSADSLRKGCKSWRHRDSKVKDAVGVPAGIEEGGRGDSHMLDNHKNSSQGRRQRCSVAGGLETRLNVRERALVEETGINTA-----ENLQLGDATGVNPGGFGKQQPPHRSVFQGGGDIVETHRRSGGVRSDVRVPTSSVEDGLGGPRDRAHTVNTVSLRQLDVGTVSLPA-------------------------------STDDVSDDAQ----QVEEWSAQFRDKRLAEHDSRRDALLREL-LSPTSDGGDVPTTMTAGEENGRTVASSPVRRTGRCEE----SGVGATLGEFKTSVGLSAKGDLFDDLFCRPSRLDEALTTEPGRRTPQQASWNSNRVSCIVEALSASPAFFGMPLEAMKEVGKVVEYRVLEKMASAFLQGEELDAMVIILSGRVAVKLRRADLSVVTSDELGPGDTFGEASLLDERRFLDRTPQGDGGHDVA-------------------------SSPPNVA-GEGKST---------FVGAGGPXXXXXXXXXXRAAG------------RSMETYQTLEPTRLVLVLRDDFYRMPGLLAHCFAALKRRLTAIKRCGLFSGWATEDLMRLARMSKVHRHSSKQVLLMQRK------------------------------------------EPSHLHIMLSGTCTVTKYPDRLAAVQRNINEIGAALYRINSKYTYHREVRAKI 4572
V+ ++G VK++S SLRPRLYL PGDKGYVGG G+R G G G D +R+ N+ G + R+V ++ Q G+ + T+ P P P T H P+ RR A N PP + + + EG + +++ R ++ NP+ QK +F A+GTQGRRAATR GMFDEV RS TN +PT+ A+ +L ALGV V GEAAA+ VIGRM+RNR+ + S G G+T G G + + R + G R+ A D+ +G S GG +G GEG+FK VLSSMAK RLR GL IK NP D+LRRGF E+EP KHG TALGCHL+KGWEEQK G++ RALGH+RRAVASEPENV+ALFCKAV+SAQ+ ELFDAL DFSA I+F+L E +SG+ + TK W ++G LA LY NRALVHVCLGDD SALDDL RA+ARDTRNIT GAQQDYSRIRALQ+ E T XXXXXXXXXXXXXXXX A + G +A R KS ++ V G+ G + +H++ +RC+ + L E+ + E G+ + ++L L + G G++ H Q GG + G R ++ G P+ R +T + +PA + D S DA E WS FRDKRL E + RR ALLREL LSPT DGG+ +E+GR A S R +G C+ +G GA+LGEFK S+GLSAKG+LFDDLFCRPS LDEALTTEPGRRTP+Q V +VEAL+A PAF G+ E M E+G VEYR+L+KM++ FLQGEE DAMV+ILSGR AD SVVT+DELGPGD FGEA +LDE R + + H+ A S+ P VA E K T GAG P +G RSMETYQTLEPTRLVL+L+ DFYR+PGLL HC A KRRL AIK CGLF GW EDLMRL RMS++HRH SK VLLMQRK EPSHLHI+LSG CTVTKYPDRL+AVQR INEIGAALYRI SKYTYHR+VR K+
Sbjct: 7 VLTTMRGGHVKITSPSLRPRLYLYPGDKGYVGGGGSAMNANTDSHDRGERSSTGCSNGGVGGSXXXXXXXGDRDRR--NQSGTELDRRV---------------------------------ESERQAWQSKGRRVAADTSSLFRPSIPTPGSFTTPAGHGPSTTAPSAAGXXXXXXXXXRRNARIDLGFPPGVGVTPPGGVIRRNRTRPPKTTGTAAGPAAEGSWKAAT-VRAPRPDEGNPMCQKKIFNATGTQGRRAATRAGMFDEVLRSDQTNVNPTETATTGNLRSALGVVVTGEAAARAVIGRMIRNRKAKMAKTAMSKGGEDCSSGVTVGACAHGPISKGADRGGKTGGRSKVACG--DREGRGGSAGVLKNKPAKGVSISAGGVSGGLLGEGIFKTVLSSMAKKRLREGLHEIKSNPLDLLRRGFAEVEPAKHGSTALGCHLIKGWEEQKNGNKSRALGHFRRAVASEPENVEALFCKAVLSAQLMELFDALKDFSAAISFKLDETHRAALRQSGA----------SNTKRPSNWVTASGNAAGVYTHGRDGGEARTGQGGGTSGESNVSLAHLYGNRALVHVCLGDDDSALDDLDRAVARDTRNIT----------------GAQQDYSRIRALQM---------LEQTATDRNAIQETISRPSTPAVKDGPHTGSIALNGSPTTAAXXXXXXXXXXXXXXXXGATGAPEEKGGARRPRAVKSHGKGISSSGGGLVSDGPAAMHAR--AKSLPSTGARSTTVVVAEPGV---GMAEKPPAGHHEHV-----RRCTSSPLL-------EKTFLGEVGVGSVIPAPGKSLLLEENKTPASPGHGQRVMEHEGTAQDGGSVAAA--ADGPATFITRTGAATRTAGYSLPKGRQGDTHTGCGNDRATDSNDIPAPPAXXXXXXXXXXXXXXXXXXXXXXTMTTRTTAGDKSIDAGLSSCSSEHWSDLFRDKRLMEDNFRRRALLRELHLSPT-DGGEGRRNRYP-DEDGRGGAESEKRNSGGCDRLRKTTGKGASLGEFKASMGLSAKGELFDDLFCRPSFLDEALTTEPGRRTPEQ-------VVHVVEALAACPAFDGLAKEVMIEIGNAVEYRLLDKMSAVFLQGEETDAMVVILSGR-------ADFSVVTADELGPGDVFGEACMLDEHRITAQRRRNSHCHENACEGAQGSRGADEPPGFFTSSREVNESASPRVAVPEDKGTQQHQPEEPLTEGAGFPGREGAGCRARITSGSXXXXXXXXXXGRSMETYQTLEPTRLVLILKRDFYRIPGLLKHCAHAFKRRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKILSQSPVYRQTLLSLLPLLRLKWMPLYVHAVPPVGPHFDAKKEPSHLHIVLSGACTVTKYPDRLSAVQRKINEIGAALYRIKSKYTYHRDVRTKV 1348
BLAST of mRNA_M-pyrifera_M_contig1084.1780.1 vs. uniprot
Match: A0A7S3XP60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP60_HETAK) HSP 1 Score: 139 bits (349), Expect = 3.800e-31 Identity = 94/295 (31.86%), Postives = 143/295 (48.47%), Query Frame = 1
Query: 3712 GRRTPQQASWNSNRVSCIVEALSASPAFFGMPLEAMKEVGKVVEYRVLEKMASAFLQGEELDAMVIILSGRVAVKLRRADLSV----VTSD--ELGPGDTFGEASL-LDERR--FLDRTPQGDGGHDVASSPPNVAGEGKSTFVGAGGPXXXXXXXXXXRAAGRSMETYQTLEPTRLVLVLRDDFYRMPGLLAHCFAALKRRLTAIKRCGLFSGWATEDLMRLARMSKVHRHSSKQVLLMQRKEPSHLHIMLSGTCTVTKYPDRLAAVQRNINEIGAALYRINSKYTYHREVRAK 4569
GRRT Q ++ + AL +P G+P ++E+ KV EYRVL++ F QG+ ++ + ++L+GRV +K++ +D + VT +LGPGD FGE L LD RR FL +Y +P L+L+LR+DF R+ L H A +K++ +K G+F+GW T DL+RLA M+++ ++ Q +P L + G C V KYPDR A V+R + E+ L+R+N KYTYH +R K
Sbjct: 1 GRRTAAQ-------LAALAPALRLAPPLAGLPPATLRELCKVAEYRVLQRTEHCFRQGDPVEGVAVVLAGRVGLKMQ-SDPELPGGGVTHSVGDLGPGDAFGETELVLDPRRPCFLC--------------------------------------------------SYYVEQPVELLLLLREDFDRL--LRDHSHARMKKKYQDLKHSGVFAGWPTGDLLRLASMAQIKVFPRNTTIVQQAVQPQSLFFLTKGVCRVMKYPDREAQVRRKVEELNKELHRLNIKYTYHHTLRGK 235 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1084.1780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1084.1780.1 >prot_M-pyrifera_M_contig1084.1780.1 ID=prot_M-pyrifera_M_contig1084.1780.1|Name=mRNA_M-pyrifera_M_contig1084.1780.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1058bp MFRASGTQGRRAATRQGMFDEVSRSKHTNRDPTDIASAASLTCALGVGVKback to top mRNA from alignment at M-pyrifera_M_contig1084:423..26888+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1084.1780.1 ID=mRNA_M-pyrifera_M_contig1084.1780.1|Name=mRNA_M-pyrifera_M_contig1084.1780.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=26466bp|location=Sequence derived from alignment at M-pyrifera_M_contig1084:423..26888+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1084:423..26888+ >mRNA_M-pyrifera_M_contig1084.1780.1 ID=mRNA_M-pyrifera_M_contig1084.1780.1|Name=mRNA_M-pyrifera_M_contig1084.1780.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=6348bp|location=Sequence derived from alignment at M-pyrifera_M_contig1084:423..26888+ (Macrocystis pyrifera P11B4 male)back to top |