mRNA_M-pyrifera_M_contig10838.1779.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: D8LSJ2_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ2_ECTSI) HSP 1 Score: 295 bits (755), Expect = 1.010e-87 Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTV-----PTVLTARLKASTVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRIVWSADQP 555 VGWSNV+SGLFGGFTGSYIFSQTIFNLRAGVDTRAA V+ VML AVAASP +V+SFLPR FFG+LL+L++VDLMVEWLWQAR +MMPAEY VCLATF++IQAWGVE GMVAGLVLAA+SFTV PTV+TAR+KASTVMRTFEERVIL+AH+EQT+VLELQGYIFFGSAVKILSDVK RIVW D P Sbjct: 337 VGWSNVISGLFGGFTGSYIFSQTIFNLRAGVDTRAASAVSFVMLLAVAASPASVISFLPRCFFGSLLILVAVDLMVEWLWQARLKMMPAEYLVCLATFSSIQAWGVEKGMVAGLVLAALSFTVTYAQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPP 526
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: D8LSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ0_ECTSI) HSP 1 Score: 274 bits (700), Expect = 3.600e-78 Identity = 146/190 (76.84%), Postives = 161/190 (84.74%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTV-----PTVLTARLKASTVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRIVWSADQP 555 VGWSNV+SGLFGGFTGSYIFSQTIFNLRAGVDTR A + VML VAASP +V+SF PR FFGALLVLI+VDLMVEWLWQAR RMMPAEY VCLAT+ +IQAWGVE G+V GLVLAA+ FTV P V+ R+KASTVMRTFEERVIL+AH+EQT+VLELQGYIFFGSAV+ILSDVK IVW D P Sbjct: 324 VGWSNVISGLFGGFTGSYIFSQTIFNLRAGVDTRVASATSFVMLVGVAASPASVISFPPRCFFGALLVLIAVDLMVEWLWQARVRMMPAEYLVCLATYGSIQAWGVEKGLVVGLVLAALGFTVTYAQVPAVMKTRVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVQILSDVKDGIVWGTDLP 513
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: D8LSJ4_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ4_ECTSI) HSP 1 Score: 259 bits (663), Expect = 1.030e-74 Identity = 147/227 (64.76%), Postives = 168/227 (74.01%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTV-----PTVLTARLKASTVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRIVWSADQPDFSATATAPTPPTTTATASMAHDLIDDSSNGYNDMGS 666 VGWSNV+SGLFGGFTGSYIFSQTIFNLRAG +V+SFLPR FFG+LL+LI+VDLMVEWLWQAR +MMPAEY VCLATF +IQAWGVE GMVAGLVLAA+SFTV PTV+TAR+KASTVMRTFEERVIL+AH+EQT+VLELQGYIFFGSAVKILSDVK RIVW D P PTP + ++ DDS++ +G+ Sbjct: 324 VGWSNVISGLFGGFTGSYIFSQTIFNLRAG----------------------SVISFLPRCFFGSLLILIAVDLMVEWLWQARLKMMPAEYLVCLATFCSIQAWGVEKGMVAGLVLAALSFTVTYAQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPP--------PTPNAGAPATGIFGNVYDDSNHSTRTVGN 520
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: W7TKR3_9STRA (Sulfate permease family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKR3_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.030e-48 Identity = 101/184 (54.89%), Postives = 134/184 (72.83%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTV-----PTVLTARLKASTVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRIV 537 +G SN+VSGL GGFTGSYIFSQTIFNLR G+ TR A + F PV++++F+PR FFG LLVLI DLM+EWLW +R++MM EYAV +ATF IQ +E GM G+VLA V+FTV P VL R++ S+V+RTFEER IL A+ ++ + L L+GY+FFGSAVKIL+++K+ ++ Sbjct: 362 IGLSNLVSGLTGGFTGSYIFSQTIFNLRRGITTRVCSATIASIEFLAFLLPVSLIAFVPRFFFGGLLVLIGTDLMLEWLWMSRKKMMAPEYAVTVATFLAIQVTNIEVGMGVGVVLAMVAFTVSYAEAPVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVL 545
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: A0A4D9DC98_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC98_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.640e-48 Identity = 101/184 (54.89%), Postives = 134/184 (72.83%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTV-----PTVLTARLKASTVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRIV 537 +G SN+VSGL GGFTGSYIFSQTIFNLR G+ TR A + F PV++++F+PR FFG LLVLI DLM+EWLW +R++MM EYAV +ATF IQ +E GM G+VLA V+FTV P VL R++ S+V+RTFEER IL A+ ++ + L L+GY+FFGSAVKIL+++K+ ++ Sbjct: 334 IGLSNLVSGLTGGFTGSYIFSQTIFNLRRGITTRVCSATIASIEFLAFLLPVSLIAFVPRFFFGGLLVLIGTDLMLEWLWMSRKKMMAPEYAVTVATFLAIQVTNIEVGMGVGVVLAMVAFTVSYAEAPVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVL 517
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: A0A7S1UB31_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB31_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.700e-43 Identity = 99/185 (53.51%), Postives = 126/185 (68.11%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFT-----VPTVLTARLKASTVMRTFEERVILQ--AHREQTLVLELQGYIFFGSAVKILSDVKQRI 534 VG SN SGL GG+TGSYIFSQTIFNLR GV +R G + A + V A P +VV+++P+ FFG+LL LI VDL EWL +AR +M EY VC+ATF + GVEGGM+ G+VLA +FT +PTV T + S RTF+ER+IL H Q + +LQGYIFFGSAV +L+DVK+R+ Sbjct: 309 VGISNFCSGLSGGYTGSYIFSQTIFNLRVGVRSRITGFIIAGIEMVVFALPFSVVAYVPKCFFGSLLTLICVDLCYEWLIEARHKMAATEYFVCIATFVAVNIMGVEGGMLVGIVLAMATFTFGYARLPTVKTNIKRNSLTTRTFQERIILDKATHEGQMQIFQLQGYIFFGSAVNLLADVKERV 493
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: A0A7S3GZR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZR3_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.010e-42 Identity = 95/183 (51.91%), Postives = 125/183 (68.31%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTVP-----TVLTARLKASTVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRI 534 VG +N+ SGL GG+TGSYIFSQTIF +R GV +R G + + +P++V+S+LP+ FFG+LLV+I+ DL++EWL AR +M EY VCL TF IQ G+E GM G++LA SF V +V A L+ STV+RTFEER L AHR + + + L+GYIFFGSAVKIL DVK + Sbjct: 326 VGLANIFSGLTGGYTGSYIFSQTIFTMRRGVYSRINGYTVVLCEALLILTPISVISYLPKMFFGSLLVMIASDLLMEWLVAARHKMALMEYVVCLLTFVAIQGTGIEIGMFIGILLAMASFVVSYSSLQSVSCASLQTSTVIRTFEERAALIAHRGKVVTITLKGYIFFGSAVKILEDVKSHV 508
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: A0A024TNL5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNL5_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.120e-40 Identity = 91/197 (46.19%), Postives = 131/197 (66.50%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTVPTVLTARLKA----STVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRIVWSADQPDFSATATA 579 VGWSN+VSGL GGFTGSYIFS TIF++++GVD+R G++ + A+ ASPV++++++P+ FFG+L LI++DL++EW+ AR M EYA+ TF + AW +E G+V G+ A +F V V T ++ S V R F ER +L HR++ +VLEL GYIFFGS+V IL+ V+ IV + TA+A Sbjct: 355 VGWSNLVSGLSGGFTGSYIFSSTIFSMKSGVDSRLTGLLIFALEVALVASPVSIIAYVPKLFFGSLQTLIAIDLIMEWMVHARHSMFLGEYAILWCTFIIMNAWNLEAGIVLGIAGAGCNFIVSYVGTTSVRPISRQSLVKRDFRERTLLMQHRKRIVVLELDGYIFFGSSVHILNQVRAHIVLPDSVGSQTTTASA 551
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: A0A7R9UBE4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE4_9STRA) HSP 1 Score: 164 bits (416), Expect = 3.280e-40 Identity = 101/205 (49.27%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 1 VGWSNVVSGLFGGFTGSYIFSQTIFNLRAGVDTRAAGVVTAVMLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFT-----VPTVLTARLKASTVMRTFEERVILQA--HREQTLVLELQGYIFFGSAVKILSDVKQRIVWSADQPDFSATATAPTPPT 594 VG SN +SGL GG+TGSYIFSQTIFNLR GV +R G + + + A P + V+++P+ FFG+LL +I+VDL EWL AR +M AEY V +ATF + A GVE GMV G+VLA FT VP V ++ + S + RTF+ERVIL H + LQGYIFFGSAV +L+DVK RI W P +PPT Sbjct: 309 VGISNFLSGLTGGYTGSYIFSQTIFNLRVGVQSRITGYIITGVELIIFAVPFSAVAYVPKCFFGSLLTMIAVDLCYEWLILARHKMARAEYFVNIATFVAVNACGVELGMVIGIVLAMACFTLAYAQVPGVKSSFRRTSLITRTFQERVILDTAMHDGIMQIFSLQGYIFFGSAVNLLADVKSRIRWPDGGPASLGIERVDSPPT 513
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Match: A0A6H5KE91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE91_9PHAE) HSP 1 Score: 163 bits (413), Expect = 5.170e-40 Identity = 94/142 (66.20%), Postives = 107/142 (75.35%), Query Frame = 1 Query: 256 MMPAEYAVCLATFATIQAWGVEGGMVAGLVLAAVSFTV-----PTVLTARLKASTVMRTFEERVILQAHREQTLVLELQGYIFFGSAVKILSDVKQRIVWSADQPDFSATATAPTPPTTTATASMAHDLIDDSSNGYNDMGS 666 MMPAEY VCLATF +IQAWGVE GMVAGLVLAA+SFTV PTV+TAR+KASTVMRTFEERVIL+AH+EQT+VLELQGYIFFGSAVKILSDVK RIVW D P PTP T + ++ DDS+ +G+ Sbjct: 1 MMPAEYLVCLATFCSIQAWGVEKGMVAGLVLAALSFTVTYAQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPP--------PTPYTGAPATGLYGNVYDDSNRSTRTVGN 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10838.1779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10838.1779.1 >prot_M-pyrifera_M_contig10838.1779.1 ID=prot_M-pyrifera_M_contig10838.1779.1|Name=mRNA_M-pyrifera_M_contig10838.1779.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp MLFAVAASPVTVVSFLPRAFFGALLVLISVDLMVEWLWQARRRMMPAEYAback to top mRNA from alignment at M-pyrifera_M_contig10838:179..9963- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10838.1779.1 ID=mRNA_M-pyrifera_M_contig10838.1779.1|Name=mRNA_M-pyrifera_M_contig10838.1779.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9785bp|location=Sequence derived from alignment at M-pyrifera_M_contig10838:179..9963- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10838:179..9963- >mRNA_M-pyrifera_M_contig10838.1779.1 ID=mRNA_M-pyrifera_M_contig10838.1779.1|Name=mRNA_M-pyrifera_M_contig10838.1779.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig10838:179..9963- (Macrocystis pyrifera P11B4 male)back to top |