mRNA_M-pyrifera_M_contig108357.1778.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108357.1778.1
Unique NamemRNA_M-pyrifera_M_contig108357.1778.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A2E7KKE3_9PLAN (Acyl_transf_3 domain-containing protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KKE3_9PLAN)

HSP 1 Score: 285 bits (729), Expect = 4.840e-93
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1
Query:    1 AKIHGFLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAASRRVTGRGLIVLRRLRKKVEGLPLAMALRRSR 465
            AKIHGFLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAASRRVTGRGLIVLRRLRKKVEGLPLAMALRRSR
Sbjct:  279 AKIHGFLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAASRRVTGRGLIVLRRLRKKVEGLPLAMALRRSR 433          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A6I6AF89_9PLAN (Acyltransferase n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AF89_9PLAN)

HSP 1 Score: 203 bits (516), Expect = 3.370e-61
Identity = 106/154 (68.83%), Postives = 130/154 (84.42%), Query Frame = 1
Query:    4 KIHGFLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAASRRVTGRGLIVLRRLRKKVEGLPLAMALRRSR 465
            KI  FLP+L+EG+ASG LIW+LLSTE +TF+NRFLKL+L+RKLG+YSYSFYLYHFIVMYW+AYGLLL+IQP ISA YPV+LS +IAL+SI+ISYFLAI SYE VELPMI QGSL++EK +  +R +  R  I+LRRLRK+     L +AL+RSR
Sbjct:  262 KISTFLPVLIEGLASGCLIWVLLSTEGDTFYNRFLKLNLMRKLGRYSYSFYLYHFIVMYWIAYGLLLIIQPRISAAYPVVLSSVIALVSILISYFLAIVSYEWVELPMIRQGSLISEKLSEVTRGIFARTFIILRRLRKRAGDFSLTIALKRSR 415          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A2E7KKE7_9PLAN (Acyl_transf_3 domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KKE7_9PLAN)

HSP 1 Score: 180 bits (457), Expect = 1.850e-52
Identity = 99/153 (64.71%), Postives = 123/153 (80.39%), Query Frame = 1
Query:    1 AKIHGFLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAASRRVTGRGLIVLRRLRKKVEGLPLAMALRR 459
            AKI  F PILVEGIASGFLIWILLSTE NT FNRFLK++LV+KLGKYSYSFYL+HFIVMYW+AY + L+I PEISA YPVILS L+A+ISI I+YF+AI SY+ VE+PMI  G+++AE  +  ++R   R  +V+ R R+K E LPL+ A +R
Sbjct:  254 AKIDYFFPILVEGIASGFLIWILLSTEENTSFNRFLKINLVKKLGKYSYSFYLFHFIVMYWLAYCMFLVITPEISATYPVILSSLLAVISIPITYFIAIVSYKCVEVPMIKHGAVIAEVLSTGTKRSLDRIAMVVIRWRRKKEFLPLSFAFKR 406          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A517VUZ9_9PLAN (Acyltransferase family protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VUZ9_9PLAN)

HSP 1 Score: 116 bits (291), Expect = 3.710e-28
Identity = 56/114 (49.12%), Postives = 84/114 (73.68%), Query Frame = 1
Query:   16 FLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEK 357
            F  +L+E I +  ++ IL   + N F +R L  ++VRKLG+YSYSFY+YHFI++YW+AY LLL + PEI++ YP++L  ++A+IS+ ISY++A+ SY  VE PMI  G++ AEK
Sbjct:  262 FCAVLIEAIFAALIVAILADEKTNLFLSRILDFEIVRKLGRYSYSFYIYHFIILYWLAYSLLLFVSPEITSSYPLLLGVILAIISVTISYYVAMLSYFGVERPMIKYGAVTAEK 375          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A3D3QYI3_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3QYI3_9PLAN)

HSP 1 Score: 103 bits (257), Expect = 2.920e-24
Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 1
Query:   16 FLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAAS 372
            F  +L+E + +  LI IL   + N   +R L + LVRKLG  SYSFY+YHFI++YW+A GLL ++ P ++A YPV+L  L+A++S+VISY++A  SY  VE PMI  G+  A K + +S
Sbjct:   99 FCAVLMEAVFATLLIAILADGKTNPLLSRVLDVPLVRKLGLLSYSFYIYHFIILYWLACGLLAVVSPTVTAAYPVMLGLLLAVVSVVISYYVAFLSYHLVERPMIKCGAATAVKVSRSS 217          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A2D5H603_9PLAN (Acyl_transf_3 domain-containing protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2D5H603_9PLAN)

HSP 1 Score: 103 bits (257), Expect = 3.430e-23
Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 1
Query:   16 FLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAAS 372
            F  +L+E + +  LI IL   + N   +R L + LVRKLG  SYSFY+YHFI++YW+A GLL ++ P ++A YPV+L  L+A++S+VISY++A  SY  VE PMI  G+  A K + +S
Sbjct:  261 FCAVLMEAVFATLLIAILADGKTNPLLSRVLDVPLVRKLGLLSYSFYIYHFIILYWLACGLLAVVSPTVTAAYPVMLGLLLAVVSVVISYYVAFLSYHLVERPMIKCGAATAVKVSRSS 379          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A350K5X8_9PLAN (Acyl_transf_3 domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K5X8_9PLAN)

HSP 1 Score: 101 bits (252), Expect = 6.510e-23
Identity = 53/119 (44.54%), Postives = 81/119 (68.07%), Query Frame = 1
Query:   16 FLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAAS 372
            F  +L+E + +  LI IL   + N   +R L + LVRKLG+ SYSFY+YHFI++YW+A GLL ++ P ++A YP++   L+A++S+V+SY++A  SY  VE PMI  G+  A K + +S
Sbjct:  178 FCAVLMEAVFATLLIAILADGKTNPLLSRVLDVPLVRKLGQLSYSFYIYHFIILYWLACGLLAVVSPTVTAAYPLMFGLLLAVVSVVVSYYVAFLSYHLVERPMIKCGAATAVKVSRSS 296          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A517VGV9_9PLAN (Acyltransferase family protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VGV9_9PLAN)

HSP 1 Score: 102 bits (255), Expect = 6.590e-23
Identity = 55/119 (46.22%), Postives = 82/119 (68.91%), Query Frame = 1
Query:   16 FLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAAS 372
            F  +L+E + +  LI IL   + N   +R L + LVRKLG+ SYSFY+YHFI++YW+A GLL ++ P ++A YPV+L  L+A++S+VISY++A  SY  VE PMI  G+  A + + +S
Sbjct:  261 FCAVLMEAVFATLLIAILADGKTNPLLSRVLDVPLVRKLGQLSYSFYIYHFIILYWLACGLLAVVSPTVTAAYPVMLGLLLAVVSVVISYYVACLSYHWVERPMIKCGAATAVRVSRSS 379          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A6I6AHF7_9PLAN (Acyltransferase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AHF7_9PLAN)

HSP 1 Score: 102 bits (254), Expect = 7.240e-23
Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 1
Query:   16 FLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAASRRVTGR 390
            F  +L+E +A+  +I IL       + +R L+L LV KLG+ SYSFY+YHFI+MYW+A+GLL ++  +I+A YP++LS L+A++S+ +++ +A  SY  VE PMI  G+ +AEK T  +R  T R
Sbjct:  258 FFTVLLEALAAAAIIAILAEGTVKVWGSRMLELPLVHKLGQISYSFYIYHFIIMYWLAWGLLHLVSADITANYPLLLSLLLAVVSVPLTFVVAQLSYHGVERPMIGWGARLAEKVTDLARASTAR 382          
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Match: A0A2E7K9X9_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7K9X9_9PLAN)

HSP 1 Score: 94.4 bits (233), Expect = 1.600e-21
Identity = 54/125 (43.20%), Postives = 83/125 (66.40%), Query Frame = 1
Query:   16 FLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYSFYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQSYERVELPMISQGSLVAEKYTAASRRVTGR 390
            F  +L+E +A+  +I IL       + +R L+L LV KLG+ SYSFY+YHFI+MYW+A+GLL ++  E +A   + LS L+A++S+ +++ +A  SY+ VE PMI  G+ +AEK T  +R  T R
Sbjct:   36 FFTVLLEALAAAAIISILAEGTVKVWGSRLLELPLVHKLGQISYSFYIYHFIIMYWLAWGLLHLVSAETTANNALPLSLLLAVVSVPLTFVVAQLSYQAVERPMIGWGARLAEKVTDLARASTAR 160          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108357.1778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2E7KKE3_9PLAN4.840e-93100.00Acyl_transf_3 domain-containing protein n=3 Tax=Gi... [more]
A0A6I6AF89_9PLAN3.370e-6168.83Acyltransferase n=1 Tax=Gimesia benthica TaxID=260... [more]
A0A2E7KKE7_9PLAN1.850e-5264.71Acyl_transf_3 domain-containing protein n=2 Tax=Gi... [more]
A0A517VUZ9_9PLAN3.710e-2849.12Acyltransferase family protein n=2 Tax=Gimesia aqu... [more]
A0A3D3QYI3_9PLAN2.920e-2447.06Uncharacterized protein (Fragment) n=1 Tax=Gimesia... [more]
A0A2D5H603_9PLAN3.430e-2347.06Acyl_transf_3 domain-containing protein n=5 Tax=Gi... [more]
A0A350K5X8_9PLAN6.510e-2344.54Acyl_transf_3 domain-containing protein (Fragment)... [more]
A0A517VGV9_9PLAN6.590e-2346.22Acyltransferase family protein n=1 Tax=Gimesia alg... [more]
A0A6I6AHF7_9PLAN7.240e-2344.80Acyltransferase n=2 Tax=Gimesia TaxID=1649453 RepI... [more]
A0A2E7K9X9_9PLAN1.600e-2143.20Uncharacterized protein (Fragment) n=1 Tax=Gimesia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108357contigM-pyrifera_M_contig108357:145..612 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score105.1
Seed ortholog evalue2.9e-20
Seed eggNOG ortholog344747.PM8797T_24801
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Acyltransferase family
EggNOG OGs2J4RC@203682,COG1835@1,COG1835@2
COG Functional cat.I
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size468
Cds size468
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.380789-CDS-M-pyrifera_M_contig108357:144..6121622815593.380789-CDS-M-pyrifera_M_contig108357:144..612Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108357 145..612 -
1692277478.7759473-CDS-M-pyrifera_M_contig108357:144..6121692277478.7759473-CDS-M-pyrifera_M_contig108357:144..612Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108357 145..612 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108357.1778.1prot_M-pyrifera_M_contig108357.1778.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108357 145..612 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108357.1778.1

>prot_M-pyrifera_M_contig108357.1778.1 ID=prot_M-pyrifera_M_contig108357.1778.1|Name=mRNA_M-pyrifera_M_contig108357.1778.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
AKIHGFLPILVEGIASGFLIWILLSTEANTFFNRFLKLDLVRKLGKYSYS
FYLYHFIVMYWVAYGLLLMIQPEISAKYPVILSGLIALISIVISYFLAIQ
SYERVELPMISQGSLVAEKYTAASRRVTGRGLIVLRRLRKKVEGLPLAMA
LRRSR*
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mRNA from alignment at M-pyrifera_M_contig108357:145..612-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108357.1778.1 ID=mRNA_M-pyrifera_M_contig108357.1778.1|Name=mRNA_M-pyrifera_M_contig108357.1778.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig108357:145..612- (Macrocystis pyrifera P11B4 male)
GCGAAGATCCATGGTTTTTTACCAATTCTGGTGGAAGGAATTGCCTCGGG ATTCCTCATCTGGATTCTGCTAAGCACAGAGGCAAACACGTTCTTTAATC GTTTCCTGAAGCTCGATCTGGTACGAAAACTGGGTAAGTACTCTTACTCT TTTTACCTGTATCATTTCATCGTGATGTACTGGGTAGCCTATGGTCTGCT GTTAATGATTCAGCCTGAGATCTCGGCTAAGTATCCGGTAATTTTAAGTG GGCTCATCGCTTTGATCTCAATTGTGATCTCCTATTTCCTCGCGATTCAG TCGTATGAACGTGTTGAACTTCCCATGATCAGTCAGGGAAGTCTGGTAGC TGAAAAATATACCGCCGCTTCACGGCGCGTTACGGGAAGGGGACTCATCG TGTTACGCCGCTTGCGTAAAAAAGTGGAGGGCCTGCCTCTGGCGATGGCT CTCCGTCGTTCCCGCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig108357:145..612-

>mRNA_M-pyrifera_M_contig108357.1778.1 ID=mRNA_M-pyrifera_M_contig108357.1778.1|Name=mRNA_M-pyrifera_M_contig108357.1778.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig108357:145..612- (Macrocystis pyrifera P11B4 male)
GCGAAGATCCATGGTTTTTTACCAATTCTGGTGGAAGGAATTGCCTCGGG
ATTCCTCATCTGGATTCTGCTAAGCACAGAGGCAAACACGTTCTTTAATC
GTTTCCTGAAGCTCGATCTGGTACGAAAACTGGGTAAGTACTCTTACTCT
TTTTACCTGTATCATTTCATCGTGATGTACTGGGTAGCCTATGGTCTGCT
GTTAATGATTCAGCCTGAGATCTCGGCTAAGTATCCGGTAATTTTAAGTG
GGCTCATCGCTTTGATCTCAATTGTGATCTCCTATTTCCTCGCGATTCAG
TCGTATGAACGTGTTGAACTTCCCATGATCAGTCAGGGAAGTCTGGTAGC
TGAAAAATATACCGCCGCTTCACGGCGCGTTACGGGAAGGGGACTCATCG
TGTTACGCCGCTTGCGTAAAAAAGTGGAGGGCCTGCCTCTGGCGATGGCT
CTCCGTCGTTCCCGCTAAGCGAAGATCCATGGTTTTTTACCAATTCTGGT
GGAAGGAATTGCCTCGGGATTCCTCATCTGGATTCTGCTAAGCACAGAGG
CAAACACGTTCTTTAATCGTTTCCTGAAGCTCGATCTGGTACGAAAACTG
GGTAAGTACTCTTACTCTTTTTACCTGTATCATTTCATCGTGATGTACTG
GGTAGCCTATGGTCTGCTGTTAATGATTCAGCCTGAGATCTCGGCTAAGT
ATCCGGTAATTTTAAGTGGGCTCATCGCTTTGATCTCAATTGTGATCTCC
TATTTCCTCGCGATTCAGTCGTATGAACGTGTTGAACTTCCCATGATCAG
TCAGGGAAGTCTGGTAGCTGAAAAATATACCGCCGCTTCACGGCGCGTTA
CGGGAAGGGGACTCATCGTGTTACGCCGCTTGCGTAAAAAAGTGGAGGGC
CTGCCTCTGGCGATGGCTCTCCGTCGTTCCCGCTAA
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