mRNA_M-pyrifera_M_contig108350.1776.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A2R5G5D4_9STRA (Obg-like ATPase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5D4_9STRA) HSP 1 Score: 179 bits (454), Expect = 7.780e-52 Identity = 97/183 (53.01%), Postives = 135/183 (73.77%), Query Frame = 1 Query: 7 RRSCGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRLAGRKKAKTEEEEVEEGLLRQCLAVLEEGLPARAVL 555 R +CG+VGLP+ GKSTL NAL+ S+VA NFPF TI A V+ PD RL++LAA+ SERVVP++L DIAGL++GASEG+G+G++FL+++RSVS ++HV+RCF D++HV ++ NP+ D+ V+E EL+LADL+SVEKRL +K + ++ +EE +R CLA EG PAR VL Sbjct: 5 RAACGIVGLPNVGKSTLCNALSRSEVALASNFPFCTIEPNVARVAVPDPRLARLAALAKSERVVPQMLELHDIAGLIKGASEGEGLGNKFLANIRSVSMIVHVLRCFHNVDILHVSADERGITNPVDDLEVVETELMLADLASVEKRLQKKKMSPGDKILLEE--VRDCLA---EGRPARDVL 182
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A0Q7TWZ8_9HYPH (Ribosome-binding ATPase YchF n=2 Tax=Pseudolabrys TaxID=556257 RepID=A0A0Q7TWZ8_9HYPH) HSP 1 Score: 173 bits (438), Expect = 1.360e-49 Identity = 92/182 (50.55%), Postives = 131/182 (71.98%), Query Frame = 1 Query: 16 CGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRL-AGRKKAKTEEEEVEEGL--LRQCLAVLEEGLPARAV 552 CG+VGLP+ GKSTL NALT + A N+PF TI +++ PD RL +LAAI S +++P + FVDIAGLV GAS+G+G+G++FL+++R V A++HVVRCF++DD+ HV + ++P+ DI +IE EL+LADL S+EKR+ A KKAK ++E +E L +++CL L EG PAR V Sbjct: 5 CGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEIAVPDPRLDKLAAIAKSAQILPTRITFVDIAGLVRGASKGEGLGNQFLANIREVDAIVHVVRCFEDDDITHVEGK----IDPIADIDIIETELMLADLESLEKRVDALEKKAKGNDKEAKEALDLVKRCLVPLREGKPARIV 182
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A5A8DAF5_CAFRO (Obg-like ATPase 1 n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DAF5_CAFRO) HSP 1 Score: 172 bits (435), Expect = 1.390e-48 Identity = 100/193 (51.81%), Postives = 129/193 (66.84%), Query Frame = 1 Query: 13 SCGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRS-------ESGETLNPMLDIAVIEQELLLADLSSVEKRLAGRKKAKTE-------EEEVEEGLLRQCLAVLEEGLPARA 549 SCGLVGLP+ GKS++ NALTSS +A + NFPF TI A V DARL++L + SER VP L F+DIAGLV+GAS+GKGMG++FL++VRS SA+ HVVRCF+++DVIHVR E+ TL+P+LD+A+IE EL+LADL S E +LA +K K + + L LEEG PA A Sbjct: 33 SCGLVGLPNVGKSSIFNALTSSTMAEMANFPFCTIEPNVATVPVRDARLTKLTEMANSERSVPTGLEFIDIAGLVKGASDGKGMGNKFLTNVRSTSAIAHVVRCFQDEDVIHVRDGQDDADHEAARTLDPVLDLAIIEGELVLADLQSAELQLAKARKGKGKASGAAGVDPAAALAFLEGVCPALEEGQPAAA 225
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A2A5B725_9RICK (Ribosome-binding ATPase YchF n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2A5B725_9RICK) HSP 1 Score: 169 bits (429), Expect = 2.840e-48 Identity = 92/181 (50.83%), Postives = 132/181 (72.93%), Query Frame = 1 Query: 16 CGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRLAG-RKKAKTEEEEVEE-GLLRQCLAVLEEGLPARAV 552 CG+VGLP+ GKSTL NALT+S A N+PF TI T VS PD+RL+ LA S +++P + FVDIAGLV+GAS+G+G+G++FLS +R V A++HV+RCF++ DV HV + ++P+ D VIE EL++ADL SVEKR++G KKAK+++ +EE LL++C +LE+G P R++ Sbjct: 5 CGIVGLPNVGKSTLFNALTASANAEAANYPFCTIEPNTGIVSVPDSRLANLAENAGSAKIIPAFIEFVDIAGLVKGASKGEGLGNKFLSHIREVDAIIHVLRCFEDVDVTHVHDK----IDPIEDAEVIETELIIADLESVEKRVSGLTKKAKSDKALLEELELLKECQKILEQGKPIRSM 181
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A1H7QYQ7_9RHOB (Ribosome-binding ATPase YchF n=5 Tax=Jannaschia TaxID=188905 RepID=A0A1H7QYQ7_9RHOB) HSP 1 Score: 169 bits (429), Expect = 2.980e-48 Identity = 94/181 (51.93%), Postives = 128/181 (70.72%), Query Frame = 1 Query: 19 GLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRLAG--RKKAKTEEEEVE-EGLLRQCLAVLEEGLPARAV 552 G+VGLP+ GKSTL NALT + A NFPF TI DV+ PDARL +LAAI S++++P + FVDIAGLV+GAS+G+G+G++FL+++R A+ HV+RCF++ DV HV + +NP+ D +IE EL++AD+ S+EKRL G RK E+E VE E LL+ LAVL +G PAR V Sbjct: 6 GIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGDVAVPDARLDKLAAIAGSKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVE----DRVNPVEDAEIIETELMIADMESIEKRLQGLSRKVRGGEKEAVEQERLLKAALAVLNDGKPARTV 182
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A0A1PXN8_9BACT (Ribosome-binding ATPase YchF n=1 Tax=bacterium YEK0313 TaxID=1522316 RepID=A0A0A1PXN8_9BACT) HSP 1 Score: 169 bits (429), Expect = 2.980e-48 Identity = 92/180 (51.11%), Postives = 124/180 (68.89%), Query Frame = 1 Query: 16 CGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRLAG-RKKAKTEEEEVEEG--LLRQCLAVLEEGLPAR 546 CG+VGLP+ GKSTL NALT + A N+PF TI DVS PD RL QLAAI S ++P + FVDIAG+V GAS+G+G+G++FL+++R V A+ HVVRCF+ D+ HV + ++P+ DI IE EL+LADL S+EKRL G KKAK+ ++E +E L+ + L L +G PAR Sbjct: 5 CGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVSVPDPRLDQLAAIGKSREIIPTRITFVDIAGIVRGASKGEGLGNQFLANIREVDAIAHVVRCFENGDITHVEGK----IDPIADIETIETELMLADLESLEKRLVGLEKKAKSGDKEAKEAVDLINRALVHLRDGRPAR 180
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A4P7F3E0_9HYPH (Ribosome-binding ATPase YchF n=3 Tax=Beijerinckiaceae TaxID=45404 RepID=A0A4P7F3E0_9HYPH) HSP 1 Score: 169 bits (429), Expect = 2.980e-48 Identity = 93/182 (51.10%), Postives = 127/182 (69.78%), Query Frame = 1 Query: 16 CGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRLAG-RKKAKTEEEEVEEG--LLRQCLAVLEEGLPARAV 552 CG+VGLP+ GKSTL NALT + A N+PF TI DV+ PD RL +LAAI S+ ++P L FVDIAGLV GAS+G+G+G++FL+++R A+ HVVRCF++ D+ HV + + P+ DI IE EL+LADL S+EKR+ KKAK ++E +E L+++CLA+L EG PAR V Sbjct: 5 CGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDERLEKLAAIAGSKEIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFEDSDITHVEGK----IVPVDDIETIETELMLADLESLEKRVVALEKKAKGGDKEAKEAFDLVQRCLALLREGKPARLV 182
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A522GEB2_9HYPH (Ribosome-binding ATPase YchF n=2 Tax=Beijerinckiaceae TaxID=45404 RepID=A0A522GEB2_9HYPH) HSP 1 Score: 169 bits (428), Expect = 4.200e-48 Identity = 91/182 (50.00%), Postives = 126/182 (69.23%), Query Frame = 1 Query: 16 CGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRLAG-RKKAKTEEEEVEE--GLLRQCLAVLEEGLPARAV 552 CG+VGLP+ GKSTL NALT + A N+PF TI DV+ PD RL +LAAI S+ ++P L FVDIAGLV GAS+G+G+G++FL+++R A+ HVVRCF++ D+ HV + + P+ DI +IE EL+LADL S+EKR+ KKAK ++E +E L+ +CL +L EG P+R V Sbjct: 5 CGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIDPNVGDVAVPDPRLEKLAAIASSKEIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFEDSDITHVEGK----IAPVADIEIIETELMLADLESLEKRIVPLEKKAKGGDKEAKELFDLMNRCLVLLREGKPSRLV 182
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A1B3NML3_9HYPH (Ribosome-binding ATPase YchF n=17 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1B3NML3_9HYPH) HSP 1 Score: 169 bits (428), Expect = 4.200e-48 Identity = 93/182 (51.10%), Postives = 126/182 (69.23%), Query Frame = 1 Query: 16 CGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKR-LAGRKKAKTEEEEVEE--GLLRQCLAVLEEGLPARAV 552 CG+VGLP+ GKSTL NALT + A N+PF TI DV+ PD RL +LAAI S+ ++P L FVDIAGLV GAS+G+G+G++FL+++R A+ HVVRCF++ D+ HV + P+ DI +IE EL+LADL S+EKR L KKAKT +++ +E L+ +CL +L EG PAR V Sbjct: 5 CGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGDVAVPDPRLEKLAAIAGSKEIIPTRLTFVDIAGLVRGASKGEGLGNQFLANIRECDAIAHVVRCFEDGDITHVEGKVA----PINDIEIIETELMLADLESLEKRVLPLEKKAKTGDKDAKELAELMNRCLVLLREGKPARLV 182
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Match: A0A4R7CCM9_9HYPH (Ribosome-binding ATPase YchF n=1 Tax=Enterovirga rhinocerotis TaxID=1339210 RepID=A0A4R7CCM9_9HYPH) HSP 1 Score: 169 bits (428), Expect = 4.200e-48 Identity = 93/182 (51.10%), Postives = 129/182 (70.88%), Query Frame = 1 Query: 16 CGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDARLSQLAAIFPSERVVPELLRFVDIAGLVEGASEGKGMGSRFLSDVRSVSALLHVVRCFKEDDVIHVRSESGETLNPMLDIAVIEQELLLADLSSVEKRLAG-RKKAKTEEEEVEE--GLLRQCLAVLEEGLPARAV 552 CG+VGLP+ GKSTL NALT + A N+PF TI +V PD RL QL AI S+ +P L FVDIAGLV+GAS+G+G+G++FL+++R A+ HVVRCF++ D+ HV SG +++P+ DI VIE EL+LADL S+E+R+ KKAK ++E +E L+++CL +L+EG PAR V Sbjct: 5 CGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNVGEVGVPDERLEQLCAIAGSKETIPTRLTFVDIAGLVKGASKGEGLGNQFLANIRECDAIAHVVRCFEDGDITHV---SG-SIDPLADIEVIETELMLADLDSLERRVTALEKKAKGADKEAKETLDLVKRCLPLLQEGKPARLV 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108350.1776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108350.1776.1 >prot_M-pyrifera_M_contig108350.1776.1 ID=prot_M-pyrifera_M_contig108350.1776.1|Name=mRNA_M-pyrifera_M_contig108350.1776.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp MRRRSCGLVGLPSAGKSTLVNALTSSDVATVGNFPFTTISTQTADVSFPDback to top mRNA from alignment at M-pyrifera_M_contig108350:24..578- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108350.1776.1 ID=mRNA_M-pyrifera_M_contig108350.1776.1|Name=mRNA_M-pyrifera_M_contig108350.1776.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=555bp|location=Sequence derived from alignment at M-pyrifera_M_contig108350:24..578- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108350:24..578- >mRNA_M-pyrifera_M_contig108350.1776.1 ID=mRNA_M-pyrifera_M_contig108350.1776.1|Name=mRNA_M-pyrifera_M_contig108350.1776.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig108350:24..578- (Macrocystis pyrifera P11B4 male)back to top |