mRNA_M-pyrifera_M_contig108316.1771.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Match: M7XXH5_9BACT (OMP_b-brl_2 domain-containing protein n=2 Tax=Mariniradius TaxID=1245590 RepID=M7XXH5_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 7.240e-8 Identity = 45/126 (35.71%), Postives = 64/126 (50.79%), Query Frame = 1 Query: 10 VEVEVSTDELNNLSKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKPLFYYQDGTEAKLLYYKKYKENKS----TSFKVLYNEAFIQQLSSYLEIDQASMEYDVNSMTTAYLNYYETNSLSPLFQ 375 VE EVS+ N L T + + +FL+ ++ GEKSL ++++ SK FY +DG LL YKKY K T V N+ + QLS YL+ D SM+ S+ Y+ SL LF+ Sbjct: 90 VETEVSSSNTNQLDNTARLETIQEQVFLQTLIKGEKSLYLNVNSFSKENFYIKDGDRFLLLTYKKYNAEKLEGGYTRSYVAENKMYQGQLSVYLQ-DCPSMKKATQSVL------YKKESLKRLFE 208
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Match: A0A1M7NNS9_9FLAO (Outer membrane protein beta-barrel domain-containing protein n=1 Tax=Polaribacter sp. KT 15 TaxID=1896175 RepID=A0A1M7NNS9_9FLAO) HSP 1 Score: 58.5 bits (140), Expect = 1.820e-7 Identity = 39/131 (29.77%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 10 VEVEVSTDELNNLSKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKPLFYYQDGTEAKLLYYKKYKENKSTSFKVLYNEAFIQQL------SSYLEIDQASMEYDVNSMTTAYLNYYETNSLSPLFQKKE 384 V+++ S+D L NLSK L K +FL+ +V GE +L +++KN K FY ++ ++ +LL YK YK ++ N F QQ+ SS+ ++Y+ + ++ Y N+ SP E Sbjct: 86 VDIDKSSDNLENLSKNKRAILEKETLFLKVLVEGETTLYQYLNKNLKRYFYSKNNSKIELLIYKTYKVGS----RLAENNRFKQQIWKDLKCSSFKLNKIEKLKYEQKELIDYFIEYNNCNNSSPAINYNE 212
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Match: A0A2R7NI48_9FLAO (Uncharacterized protein (Fragment) n=1 Tax=Chryseobacterium sp. HMWF028 TaxID=2056862 RepID=A0A2R7NI48_9FLAO) HSP 1 Score: 55.5 bits (132), Expect = 2.020e-6 Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = 1 Query: 13 EVEVSTDELNNLSKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKPLFYYQDGTEAKLLYYKKYKENKSTSFKVLYNEAFIQQLSSYLEIDQASMEYDVNSMTTAYLNYYETNSLSPLF 372 +++ S+D L++LS + E +L+K+ +FL+E+V G+K+L + +N + FY + L YKKY N S+S +V N+ +I QL + D N+ A Y T+ L +F Sbjct: 9 DIDYSSDNLDDLSNSKEPELKKDIVFLKELVNGKKNLYFYQKQNFERYFYSDSDSSIHPLTYKKYYFNGSSS-QVATNDEYINQLKTIFSDD-------ANAKVLAAKTKYTTSDLKKIF 120
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Match: A0A0H4PKP0_9BACT (N-acetylmuramoyl-L-alanine amidase n=3 Tax=Cyclobacterium TaxID=68288 RepID=A0A0H4PKP0_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 2.200e-6 Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 10 VEVEVSTDELNNLSKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKPLFYYQDGTEAKLLYYKKYKENKSTSFKVLYNEAFIQQLSSYL--------EIDQASMEYDVNSMTTAYLNYYETNSLSPLFQK 378 VE EV+ + + S++ +R + IFL+ +V+GEKSLL + + K +Y ++G LL YK Y ++ NE + +QL+SYL ++ AS YD S+ + ++ YYE P F+K Sbjct: 101 VEKEVTKNTVYVHSESSALQVRMDTIFLQTLVLGEKSLL-GMKSSGKENYYIKEGNSYTLLKYKWYLVEQNGKELKAENETYKRQLASYLGDCLYMTATLEGAS--YDSKSLESIFMKYYECKDGLPAFKK 228
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Match: UPI001F32EBCD (PorT family protein n=1 Tax=Aequorivita sp. F47161 TaxID=2874475 RepID=UPI001F32EBCD) HSP 1 Score: 53.5 bits (127), Expect = 1.020e-5 Identity = 41/132 (31.06%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 10 VEVEVSTDELNNLSKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKPLFYYQDGTEAKLLYYKKYKENKSTSFKVLYNEAFIQQLSSYLEIDQAS------MEYDVNSMTTAYLNYYET-NSLSPLFQKKE 384 VE++ STD +NNL DL++ IFL+ +V G+ SL ++ ++ FY +D + L YK+Y T K+ N+ + QQL++ L + +EY NS+ Y NS S +F+K + Sbjct: 86 VEIDQSTDVVNNLKFDRNPDLKEETIFLKTLVEGKASLYFTLNSDTPRYFYSKDNGTIEQLIYKRY---LVTRLKMGTNDRYKQQLATNLNCSDLTEKSFENLEYKTNSLINIITKYNSCHNSESVVFKKNK 214
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Match: UPI001E45EB9F (hypothetical protein n=3 Tax=Mangrovimonas TaxID=1211036 RepID=UPI001E45EB9F) HSP 1 Score: 52.4 bits (124), Expect = 2.570e-5 Identity = 35/118 (29.66%), Postives = 60/118 (50.85%), Query Frame = 1 Query: 10 VEVEVSTDELNNLSKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKPLFYYQ-DGTEAKLLYYKKYKENKSTSFKVLYNEAFIQQLSSYLEIDQA------SMEYDVNSMTTAYLNY 342 V++++S+D L+NLS E N+FL+ +V G+ L +K+ +++ DG E L YK+Y +K F YN+ F +Q+ S L S+EY+ +T ++ Y Sbjct: 85 VQIDISSDHLDNLSLQREPKFETKNLFLKTLVSGKAHLFQFTEKDGLSKYFFSLDGGETTQLIYKRYVNDKREIF---YNKDFREQIYSQLTCGSKMLEMVRSIEYNSKDLTKVFIGY 199
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Match: UPI001CC9A60B (PorT family protein n=1 Tax=Psychroflexus sp. CCL10W TaxID=2873598 RepID=UPI001CC9A60B) HSP 1 Score: 52.0 bits (123), Expect = 3.510e-5 Identity = 41/137 (29.93%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 7 YVEVEVSTDELNNL--SKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKPLFYYQDGTEAKLLYYKKYKENKSTSFKVLYNEAFIQQLSSYLEIDQ------ASMEY---DVNSMTTAYLNYYETNSLSPLFQKKE 384 +++ ++S D+++ L S+ P FD K ++FL+ IV G+ SL H + +Y ++G+ K+L YKKY N + K+ N F QQL + L+ D+ AS++Y D+ + + Y ++ + S QK++ Sbjct: 85 FIDTDISRDDMSRLNNSRLPIFD--KKHLFLKVIVEGKASLYKHSSTYNTRYYYEKNGSNLKMLIYKKYLNNDN---KIDENNNFRQQLLNNLKCDELSKSQFASLKYTEKDLRKIISKYNACFDHETYSFHEQKRK 216 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108316.1771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108316.1771.1 >prot_M-pyrifera_M_contig108316.1771.1 ID=prot_M-pyrifera_M_contig108316.1771.1|Name=mRNA_M-pyrifera_M_contig108316.1771.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp TGYVEVEVSTDELNNLSKTPEFDLRKNNIFLEEIVIGEKSLLMHIDKNSKback to top mRNA from alignment at M-pyrifera_M_contig108316:230..613- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108316.1771.1 ID=mRNA_M-pyrifera_M_contig108316.1771.1|Name=mRNA_M-pyrifera_M_contig108316.1771.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig108316:230..613- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108316:230..613- >mRNA_M-pyrifera_M_contig108316.1771.1 ID=mRNA_M-pyrifera_M_contig108316.1771.1|Name=mRNA_M-pyrifera_M_contig108316.1771.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig108316:230..613- (Macrocystis pyrifera P11B4 male)back to top |