mRNA_M-pyrifera_M_contig108316.1770.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: A0A2E9GAG4_9RHOB (Uncharacterized protein n=1 Tax=Thalassobius sp. TaxID=1979401 RepID=A0A2E9GAG4_9RHOB) HSP 1 Score: 58.9 bits (141), Expect = 1.960e-8 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 49 NYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGLE 216 N+QSGY++QNSGDT++G +D + W RNPE I FKNS + + + +IK+F ++ Sbjct: 23 NFQSGYVIQNSGDTLKGEIDNKFWRRNPENITFKNS--NGITQTFGVNDIKAFQVD 76
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: A0A4U6DD29_9BACT (Uncharacterized protein n=1 Tax=Dyadobacter frigoris TaxID=2576211 RepID=A0A4U6DD29_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 3.650e-8 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 19 TSLEQLSLYPNYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSF 207 T + +S NY+SG+++ N DT+RG +DY++W +NPE I FK +D V Y +I F Sbjct: 15 TLFQSVSAQKNYESGFVIINQRDTLRGFIDYKNWSKNPEKINFKTILEADVVTTYGTDDISGF 77
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: A0A2E9GAI7_9RHOB (OMP_b-brl_2 domain-containing protein n=1 Tax=Thalassobius sp. TaxID=1979401 RepID=A0A2E9GAI7_9RHOB) HSP 1 Score: 56.6 bits (135), Expect = 1.280e-7 Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 1 Query: 49 NYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGLE 216 N+Q GY++QNSGDT+RG +D ++W RNPE I FK + + + + +I+ F +E Sbjct: 22 NFQPGYVIQNSGDTLRGEIDNKNWRRNPETITFKT--IDNNIKSLGVNDIQEFQVE 75
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: UPI001BE132B9 (outer membrane beta-barrel protein n=1 Tax=Dyadobacter sp. CECT 9275 TaxID=2822344 RepID=UPI001BE132B9) HSP 1 Score: 56.2 bits (134), Expect = 1.750e-7 Identity = 23/57 (40.35%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 49 NYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGLED 219 N+Q GY++ +GDT++G +DY++W+ NP+ I FK + +S E +V+ + EIK F + + Sbjct: 24 NFQPGYMISYTGDTLKGFIDYRNWVINPDQIAFKKTPVS-EASVHLVEEIKGFSVNN 79
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: A0A2I0D428_9FLAO (Uncharacterized protein n=3 Tax=Psychroflexus TaxID=83612 RepID=A0A2I0D428_9FLAO) HSP 1 Score: 53.5 bits (127), Expect = 1.570e-6 Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 49 NYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGLED 219 NY GYI++ + DT+ G +D++DW + P I+FK+S ++ + V+ L+I FG+ED Sbjct: 25 NYLPGYIIKKNKDTINGIIDFRDWDKTPNEIKFKSSNTNNPI-VFNPLDIIEFGVED 80
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: UPI001E49FEF5 (PorT family protein n=1 Tax=Mucilaginibacter roseus TaxID=1528868 RepID=UPI001E49FEF5) HSP 1 Score: 53.1 bits (126), Expect = 2.150e-6 Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 1 Query: 49 NYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGLE 216 N++ GYIV+N+GDT+RG +D ++W NPE+I FK + D Y+ + SF ++ Sbjct: 21 NFKDGYIVKNTGDTIRGKIDLREWNINPEYIDFKAA--DDTSQRYKPANVSSFYVQ 74
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: A0A4Q6DUL1_9SPHI (Uncharacterized protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q6DUL1_9SPHI) HSP 1 Score: 52.0 bits (123), Expect = 5.170e-6 Identity = 25/56 (44.64%), Postives = 34/56 (60.71%), Query Frame = 1 Query: 49 NYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGLE 216 N+Q GYIV SGDTV G +DY++W +PE I FKN + + Y +I F +E Sbjct: 22 NFQKGYIVNLSGDTVPGAIDYREWAGSPEKILFKN--VDGTMVSYTNKQISYFEIE 75
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: A0A4Q5QUB7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q5QUB7_9BACT) HSP 1 Score: 52.0 bits (123), Expect = 5.430e-6 Identity = 21/56 (37.50%), Postives = 33/56 (58.93%), Query Frame = 1 Query: 46 PNYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGL 213 P+Y+ G++V NSGDT +G +DY+ W RNP+ I FK + I ++ F + Sbjct: 24 PSYREGFVVDNSGDTSKGWIDYRQWERNPKTISFKKDLSLTTSTQFTIDDLTYFSI 79
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: A0A1G7FRP8_9SPHI (Uncharacterized protein n=1 Tax=Mucilaginibacter pineti TaxID=1391627 RepID=A0A1G7FRP8_9SPHI) HSP 1 Score: 51.6 bits (122), Expect = 7.500e-6 Identity = 23/68 (33.82%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 16 STSLEQLSLYPNYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFGLED 219 S S+ L NY+ GYI+ N+ DT++G ++Y++W +NP+ I+FK + V Y + I F + + Sbjct: 11 SLSISLLHAQSNYKPGYIINNNKDTLKGFINYREWSKNPQSIKFKPGTDAQPVN-YTVNNINEFAVSN 77
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Match: UPI00131E9A8B (hypothetical protein n=1 Tax=Mucilaginibacter sp. L196 TaxID=1641870 RepID=UPI00131E9A8B) HSP 1 Score: 51.2 bits (121), Expect = 1.030e-5 Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = 1 Query: 49 NYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKNSWLSDEVAVYRILEIKSFG 210 NY+ GY+V GDT++G +DY++WI+NP + FK +++ + Y I +FG Sbjct: 23 NYKPGYVVTLKGDTLKGYIDYKEWIQNPRGVNFKTDAGANQTS-YSINNCSAFG 75 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108316.1770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108316.1770.1 >prot_M-pyrifera_M_contig108316.1770.1 ID=prot_M-pyrifera_M_contig108316.1770.1|Name=mRNA_M-pyrifera_M_contig108316.1770.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp VITKESTSLEQLSLYPNYQSGYIVQNSGDTVRGGLDYQDWIRNPEFIRFKback to top mRNA from alignment at M-pyrifera_M_contig108316:2..220- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108316.1770.1 ID=mRNA_M-pyrifera_M_contig108316.1770.1|Name=mRNA_M-pyrifera_M_contig108316.1770.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=219bp|location=Sequence derived from alignment at M-pyrifera_M_contig108316:2..220- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108316:2..220- >mRNA_M-pyrifera_M_contig108316.1770.1 ID=mRNA_M-pyrifera_M_contig108316.1770.1|Name=mRNA_M-pyrifera_M_contig108316.1770.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig108316:2..220- (Macrocystis pyrifera P11B4 male)back to top |