mRNA_M-pyrifera_M_contig108314.1769.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A6I6AAQ0_9PLAN (Uncharacterized protein n=2 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AAQ0_9PLAN) HSP 1 Score: 395 bits (1016), Expect = 6.670e-125 Identity = 192/204 (94.12%), Postives = 198/204 (97.06%), Query Frame = 1 Query: 1 GTSVYGGVNSDVFYITPSLESEITVNGLSPATPGDTLFYNEPTDGAYIDYDSENARLDYAGGYQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 GTSVYGGVNSD FYITPSLESEITVNGLSPATPGDTLFYNEP DGAY+DYDSENARLDYAGGYQSI+VTGIENLEAGFSVPDPAHLMIKGTSG+DVLTITASDNNSGSYQLNAGPVVNFFSIS LEFYGFEGDDQLIINNPAGG+FAPEDGIYFDGG GGETSGD LEISGG+AV ETHHFLDESQGRVFFNAATRPAI+YAGL Sbjct: 972 GTSVYGGVNSDAFYITPSLESEITVNGLSPATPGDTLFYNEPIDGAYLDYDSENARLDYAGGYQSIYVTGIENLEAGFSVPDPAHLMIKGTSGEDVLTITASDNNSGSYQLNAGPVVNFFSISYLEFYGFEGDDQLIINNPAGGIFAPEDGIYFDGGGGGETSGDRLEISGGVAVVETHHFLDESQGRVFFNAATRPAIQYAGL 1175
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A5A8ATH4_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A5A8ATH4_9PLAN) HSP 1 Score: 396 bits (1018), Expect = 3.040e-124 Identity = 194/204 (95.10%), Postives = 198/204 (97.06%), Query Frame = 1 Query: 1 GTSVYGGVNSDVFYITPSLESEITVNGLSPATPGDTLFYNEPTDGAYIDYDSENARLDYAGGYQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 GTSVYGGVNSD FYITPSLESEITVNGLSPATPGDTLFYNEP DGAY+DYDSENARLDYA GYQSI+VTGIENLEAGFSVPD AHLMIKGT+GDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVF PEDGIYFDGGDGGETSGD LEISGGIAVAETHHFLDESQGRVFFNAATRPAI+YAGL Sbjct: 972 GTSVYGGVNSDAFYITPSLESEITVNGLSPATPGDTLFYNEPIDGAYLDYDSENARLDYASGYQSIYVTGIENLEAGFSVPDSAHLMIKGTAGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFTPEDGIYFDGGDGGETSGDRLEISGGIAVAETHHFLDESQGRVFFNAATRPAIQYAGL 1175
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A518FI17_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FI17_9PLAN) HSP 1 Score: 311 bits (798), Expect = 1.160e-94 Identity = 150/207 (72.46%), Postives = 174/207 (84.06%), Query Frame = 1 Query: 1 GTSVYGGVNSDVFYITPSLESEITVNGLSP---ATPGDTLFYNEPTDGAYIDYDSENARLDYAGGYQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 GT++YGG N+DVF +TPS SEI++NG SP A+PGDTL+YNEP DGA+ YDS +LDYAGGYQSI ++GIE ++AG SVPDPA+L I GT+GDD+LTITA+DNNSGSYQLN G VNFFSI+SL FYG EGDDQLIINNP+GGVFAPEDGIYFDGG GGET GD LE+ GG A+AETHHFLDES GRVFF+ ATRP I+Y GL Sbjct: 934 GTAIYGGTNADVFRVTPSRNSEISINGYSPSLPASPGDTLYYNEPADGAFQLYDSNTGQLDYAGGYQSITISGIETVQAGSSVPDPAYLPIIGTAGDDILTITATDNNSGSYQLNGGTAVNFFSIASLAFYGLEGDDQLIINNPSGGVFAPEDGIYFDGGTGGETLGDRLELLGGFALAETHHFLDESAGRVFFDDATRPTIQYTGL 1140
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A517VXT1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VXT1_9PLAN) HSP 1 Score: 185 bits (470), Expect = 1.460e-50 Identity = 101/207 (48.79%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 1 GTSVYGGVNSDVFYITPSLESEITVNGLSPA-TPGDTLFYNEPTDGA--YIDYDSENARLDYAGGYQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 GT++ GG ++D F ITPS+ S I V G PA +PGDTL Y P ++ + GGYQ++ IENL ++ A+L++ GTSGDDVLTITA+++NSGSYQLN GP VNF SI+ F G G+D+L+INNPAGG+F P +GI F+GG GGET+GD LEI GG A H F+++S G VF++ I Y GL Sbjct: 1203 GTTITGGDDADTFNITPSVNSSINVLGGDPAVSPGDTLTYLTPAGQTTTLTPSGADGGTISVTGGYQAVSFDEIENL----TMDANANLIVNGTSGDDVLTITATNSNSGSYQLNGGPTVNFSSITDFTFNGLNGNDRLVINNPAGGLFDPFNGITFNGGTGGETTGDTLEILGGTATTVEHRFVNDSDGSVFYDGEGTATITYIGL 1405
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A517Q8E3_9PLAN (Beta_helix domain-containing protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q8E3_9PLAN) HSP 1 Score: 184 bits (467), Expect = 3.650e-50 Identity = 100/206 (48.54%), Postives = 132/206 (64.08%), Query Frame = 1 Query: 10 VYGGVNSDVFYITPSLESEITVNGLSPA---TPGDTLFYNEPT-DGAYIDYDS-ENARLDYAGGYQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 +YGG ++D F ITPS+++ I V G PA +P DTL + P+ + + + ++ + GGYQ + IE L S L++ GTSGDDVLTITA D NSG+ QLN+GPVV+F S+S F G EGDD+L+INNPAGG+F P DGI F+GG GGETSGD LEI GG A + H F+++S G +FF+ T I Y GL Sbjct: 2897 IYGGDDADTFTITPSVDTIINVTGGDPAAPDSPADTLIFASPSGESSSLSLTGPDSGSISVTGGYQDLVFDEIEELAFESS------LVVNGTSGDDVLTITAIDANSGTLQLNSGPVVSFSSLSDFTFNGLEGDDRLVINNPAGGLFDPADGITFNGGSGGETSGDQLEILGGTAASVEHRFVNDSDGSIFFDGETTATITYTGL 3096
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A5A8AS22_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8AS22_9PLAN) HSP 1 Score: 184 bits (466), Expect = 4.970e-50 Identity = 95/205 (46.34%), Postives = 123/205 (60.00%), Query Frame = 1 Query: 10 VYGGVNSDVFYITPSLESEITVNGLSPATPGDTLFYNEP--TDGAYIDYDSENARLDYAGGYQSIFVTGIENLEAGFSVP--DPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 V GG +D FYI+PSL + I + P++PGD+L+Y P I + + ++ GYQ I +EN++ + P DPA LMI GTSGDDVLT+ D +SG++QLN GPVVNF I S F+G GDD+L+INNP GVF P GI F GG GGET GD LEI GG F+ +++GRVF+ PAI Y L Sbjct: 1468 VEGGAQADSFYISPSLNNSILLQAFGPSSPGDSLYYYNPEGVTATQITSSTNTGTVTFSNGYQDIVHISVENVQGAGAAPQSDPARLMIAGTSGDDVLTVNTVDADSGTWQLNDGPVVNFDGIESFSFFGLAGDDRLVINNPVDGVFHPPGGINFIGGTGGETWGDTLEIIGGFVADSEFEFITQNRGRVFYGDLVAPAINYFDL 1672
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A518FI06_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FI06_9PLAN) HSP 1 Score: 181 bits (458), Expect = 5.930e-49 Identity = 97/201 (48.26%), Postives = 126/201 (62.69%), Query Frame = 1 Query: 19 GVNSDVFYITPSLESEITVNGLSPA-TPGDTLFYNEPTD--GAYIDYDSENARLDYAGGYQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 G +D + P+ + IT+ G P TPGDTL Y PT A+ ++ + GGYQ + IENL S L++ GTSGDDVLTITA+D +SG+ QLN+GPV++F S+S F G EGDD+L+INNPAGG+F P DGI F+GG GGETSGD LEI GG A + H F+++S G +FF+ T I Y GL Sbjct: 1954 GTGADDITVNPNQNTTITILGGDPTLTPGDTLAYVTPTSETAAFASSGADGGTISATGGYQDLVFDEIENLTFESS------LVVNGTSGDDVLTITATDASSGTLQLNSGPVLSFSSLSDFTFNGLEGDDRLVINNPAGGLFDPADGITFNGGSGGETSGDQLEILGGTAASVEHRFVNDSDGSIFFDGETTATITYTGL 2148
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A6I6A6K4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6A6K4_9PLAN) HSP 1 Score: 179 bits (455), Expect = 1.510e-48 Identity = 94/206 (45.63%), Postives = 127/206 (61.65%), Query Frame = 1 Query: 10 VYGGVNSDVFYITPSLESEITVNGLSPATPGDTLFYNEPTDGAYIDYDSENARLD---YAGGYQSIFVTGIENLE-AGFS-VPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDESQGRVFFNAATRPAIKYAGL 612 +YGG +D FYI PS + I ++ P +P DTL+Y P +G S + + ++GGYQ I +EN+E AG PDP + + GTSG+DVLT+ A+D+NSG++QLNAGPVV+F I S F+G EGDD+L+INNP GVF P GI + GG GGET GD L+I GG F+D ++GRVF+ AI + L Sbjct: 2934 IYGGAQADSFYINPSQRNRIYLDANDPTSPADTLYYYTP-EGVTATLSSSSTNVGTVTFSGGYQEILHVDVENIENAGTPPAPDPTWISVAGTSGNDVLTVNATDSNSGTWQLNAGPVVSFDDIESFTFFGLEGDDRLVINNPVDGVFHPAGGINYGGGTGGETLGDSLQIIGGTIEDSEFQFIDYNRGRVFYGGMAASAINHVNL 3138
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A517Q8D5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q8D5_9PLAN) HSP 1 Score: 177 bits (450), Expect = 6.510e-48 Identity = 107/221 (48.42%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 1 GTSVYGGVNSDVFYITPSLESEITVNGLSPA---TPGDTLFYNEPTD------GAYIDYDSENARLDYAGG--YQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDE------SQGRVFFNAATRPAIKYAGL 612 GT + G SD FY+TPSL S I ++G SP +PGD+L Y P G IDY S ++Y+G Y I GIE+L G + P HLMI GT D LTI A+D NSG++QLN+ PVV+F +I L F+G G D+LIINNP GGVF P +GIYFDGG GG T GD LEI GG A E F + + G +FFN AT PAI Y L Sbjct: 941 GTILNGSSYSDSFYVTPSLNSTIHLHGGSPGAPTSPGDSLTYYVPVGAGASLLGPGIDYGS----INYSGATSYLGIDYDGIESLSNGGAPPATGHLMIAGTGSSDTLTINATDANSGTWQLNSDPVVSFSNIEDLSFFGLTGIDKLIINNPVGGVFNPVNGIYFDGGPGGTTIGDSLEIVGGTATTEEFQFQFDGDSTYGADGAIFFNGATTPAIHYHNL 1157
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Match: A0A518A7Q4_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A7Q4_9PLAN) HSP 1 Score: 177 bits (450), Expect = 7.030e-48 Identity = 107/221 (48.42%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 1 GTSVYGGVNSDVFYITPSLESEITVNGLSPA---TPGDTLFYNEPTD------GAYIDYDSENARLDYAGG--YQSIFVTGIENLEAGFSVPDPAHLMIKGTSGDDVLTITASDNNSGSYQLNAGPVVNFFSISSLEFYGFEGDDQLIINNPAGGVFAPEDGIYFDGGDGGETSGDHLEISGGIAVAETHHFLDE------SQGRVFFNAATRPAIKYAGL 612 GT + G SD FY+TPSL S I ++G SP +PGD+L Y P G IDY S ++Y+G Y I GIE+L G + P HLMI GT D LTI A+D NSG++QLN+ PVV+F +I L F+G G D+LIINNP GGVF P +GIYFDGG GG T GD LEI GG A E F + + G +FFN AT PAI Y L Sbjct: 941 GTILNGSSYSDSFYVTPSLNSTIHLHGGSPGAPTSPGDSLTYYVPVGAGASLLGPGIDYGS----INYSGATSYLGIDYDGIESLSNGGAPPATGHLMIAGTGSSDTLTINATDANSGTWQLNSDPVVSFSNIEDLSFFGLTGIDKLIINNPVGGVFNPVNGIYFDGGPGGTTIGDSLEIVGGTATTEEFQFQFDGDSTYGADGAIFFNGATTPAIHYHNL 1157 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108314.1769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108314.1769.1 >prot_M-pyrifera_M_contig108314.1769.1 ID=prot_M-pyrifera_M_contig108314.1769.1|Name=mRNA_M-pyrifera_M_contig108314.1769.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp GTSVYGGVNSDVFYITPSLESEITVNGLSPATPGDTLFYNEPTDGAYIDYback to top mRNA from alignment at M-pyrifera_M_contig108314:2..613+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108314.1769.1 ID=mRNA_M-pyrifera_M_contig108314.1769.1|Name=mRNA_M-pyrifera_M_contig108314.1769.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig108314:2..613+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108314:2..613+ >mRNA_M-pyrifera_M_contig108314.1769.1 ID=mRNA_M-pyrifera_M_contig108314.1769.1|Name=mRNA_M-pyrifera_M_contig108314.1769.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig108314:2..613+ (Macrocystis pyrifera P11B4 male)back to top |