mRNA_M-pyrifera_M_contig108301.1767.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108301.1767.1
Unique NamemRNA_M-pyrifera_M_contig108301.1767.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A6G0WWI0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWI0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.490e-19
Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 1
Query:    1 FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSP--TARDPRVRFVPFAFERPTMECVKQV 345
            F   K LVHKTF+RYTTRRKQGG+QS H ++ G++  SAG+ +R   E+ L+++  V+L + W   LR C RIF+G  K +R +F   S    + DPRVR VPF   RPT + V +V
Sbjct:  209 FRKDKVLVHKTFQRYTTRRKQGGSQSAHDNASGKAR-SAGAQLRRYNEMALQQDIVVVL-QTWASELRDCERIFIGCAKTSRGIFFEKSTGLASNDPRVRHVPFGTLRPTYDEVCRV 323          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A2G5B394_COERN (Uncharacterized protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B394_COERN)

HSP 1 Score: 90.1 bits (222), Expect = 1.450e-18
Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 1
Query:    7 SGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSPTAR------DPRVRFVPFAFERPTMECVKQVYAQLAEA 366
            SG+ +VHKT +RYTTRRKQGG QS+  ++ G +  SAG+ IR + E +L+EE   LL  +W  L++  + +FV  P+A+R  F + + T        DPR+R VP A  RPT+  ++++Y ++  A
Sbjct:  316 SGEIIVHKTIQRYTTRRKQGGLQSRQDNAAGHAANSAGAQIRRHNERRLQEEIYQLL-EEWRPLIKTSTHVFVRVPRASRKTFFAPADTKNSVLEWDDPRIRAVPVAMGRPTLTELQRIYREITTA 440          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A1Y1WL85_9FUNG (Uncharacterized protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WL85_9FUNG)

HSP 1 Score: 86.7 bits (213), Expect = 2.370e-17
Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1
Query:    7 SGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSPTARDPRVRFVPFAFERPTMECVKQVYAQL 357
            +G  + HKTF+RYTTRRKQGG+QS+  ++ GR   SAG+ IR   E  L E+   L+ + W  LL  CSR+FV   + NR  F  S+ +  DPRVR +P    RP++  +++ Y +L
Sbjct:  285 TGTVIEHKTFQRYTTRRKQGGSQSRQDNAMGRPAKSAGAQIRRYNERMLLEDIHALMGQ-WSLLLGACSRVFVRVARGNRKGFFGSALSWDDPRVRSLPVPMARPSLAELERAYTEL 400          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A8K1FJM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJM6_PYTOL)

HSP 1 Score: 85.5 bits (210), Expect = 5.820e-17
Identity = 54/123 (43.90%), Postives = 76/123 (61.79%), Query Frame = 1
Query:    1 FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSPT---ARDPRVRFVPFAFERPTMECVKQVYAQLA 360
            F   K L HKTF+RYTTRRKQGG+Q+ H +SGG++  SAG+ +R   E +LK++   LLA+ W  LL+    IF+   + +R  F    P    A D R+R +PFA  RPT E V +V ++L+
Sbjct:  212 FDKEKALCHKTFQRYTTRRKQGGSQAAHDASGGKAK-SAGATLRRYNEAQLKQDVADLLAQ-WKDLLKDVELIFIACGRTDRPTFFGGKPPVLQADDSRLRRIPFATFRPTFEEVCRVRSELS 332          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: K3WKI9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKI9_GLOUD)

HSP 1 Score: 85.1 bits (209), Expect = 8.020e-17
Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 1
Query:    1 FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSPT---ARDPRVRFVPFAFERPTMECVKQVYAQLA 360
            F   K L HKTF+RYT RRKQGG+QS   ++GG++  SAG+ +R   E  LK++   LLA+ W  LL+G   IF+ + K++R  F +  P    + DPR+R +PFA  RPT E V +V + L+
Sbjct:  232 FDGEKALCHKTFQRYTVRRKQGGSQSASDNAGGKAK-SAGATLRRYNETALKQDVADLLAQ-WSDLLKGTELIFLSSGKSDRATFFAEKPPVLQSDDPRLRRIPFATFRPTFEEVCRVRSDLS 352          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A8H7KXK1_9AGAM (bVLRF1 domain-containing protein n=2 Tax=Athelia sp. TMB TaxID=2748771 RepID=A0A8H7KXK1_9AGAM)

HSP 1 Score: 83.2 bits (204), Expect = 3.850e-16
Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   19 LVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLS----SSPTARDPRVRFVPFAFERPTMECVKQVYAQLA 360
            ++HKTF RYTTRRKQGG+Q  + ++ G +  SAG+ +R  GE+ L+ + R LL+ DW   L GC RIF+ A  ANR +FL     S  T +D R+R  PF   RPT   + +   +LA
Sbjct:  281 ILHKTFHRYTTRRKQGGSQGLNDNAKGNAK-SAGAQLRRYGELSLQSDIRTLLS-DWAEDLEGCERIFIRASGANRRIFLGDYEGSVLTKKDERLRGFPFPTRRPTQGELARCLGELA 396          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A484EA12_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA12_BRELC)

HSP 1 Score: 80.9 bits (198), Expect = 2.420e-15
Identity = 51/122 (41.80%), Postives = 69/122 (56.56%), Query Frame = 1
Query:    1 FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSPTARDP---RVRFVPFAFERPTMECVKQVYAQL 357
            F   K L HKTF+RYTTRRKQGGAQS  AS   R + SAG+ +R   E+ LK++   LL  +W ++L     IF+ + K  R  F         P   R++ +PF   RPT E V +VY++L
Sbjct:  210 FDKEKALCHKTFQRYTTRRKQGGAQS--ASDANRKVKSAGATLRRYNEVALKQDVAALLL-EWKNVLDDAELIFISSGKTERATFFPEKSNVLQPGDKRLKRIPFTTFRPTFEEVCRVYSEL 328          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A0N7L385_PLAHL (Ankyrin repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L385_PLAHL)

HSP 1 Score: 80.1 bits (196), Expect = 4.510e-15
Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = 1
Query:    1 FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANR-TLFLSSSPTAR--DPRVRFVPFAFERPTMECVKQVYAQLA 360
            F   K L HKTF+RYTTRRKQGGAQS  AS   +   SAG+ +R   E+ LK++   LL  +W  LL     IF+   KA R T F + +P  +  D R++ +PFA  RPT E V +V + L+
Sbjct:  211 FDKDKALCHKTFQRYTTRRKQGGAQS--ASDANKKAKSAGATLRRYNEVALKQDVATLLM-EWKDLLTNVELIFISCGKAERATFFPAKNPVLQLGDKRLKRIPFATFRPTFEEVCRVRSDLS 330          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A225X545_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X545_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 6.140e-15
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 1
Query:    1 FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANR-TLFLSSSPTAR--DPRVRFVPFAFERPTMECVKQVYAQLA 360
            F   K L HKTF+RYTTRRKQGGAQS  AS  G    SAG+ +R   E  LK++  +LL  +W  +L+    IF+ + K +R T F   +P  +  D R++ +PFA  RPT E V +V + L+
Sbjct:  201 FEKDKALCHKTFQRYTTRRKQGGAQS--ASDAGGKAKSAGATLRRYNEAALKQDVAILLT-EWKDVLKNVEMIFLSSGKTDRSTFFPEKNPVLQSDDKRLKRIPFATFRPTFEEVCRVRSDLS 320          
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Match: A0A433SUT2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SUT2_ELYCH)

HSP 1 Score: 79.7 bits (195), Expect = 6.340e-15
Identity = 53/123 (43.09%), Postives = 66/123 (53.66%), Query Frame = 1
Query:    1 FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIKLKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSPTA---RDPRVRFVPFAFERPTMECVKQVYAQLA 360
            F   + + HKTF RYT RRK+G AQS H S G R   SAG+ +R   E  L +E + LL   W  LL  C  +FV  P ANR +F S    A    D R+R +PF   RPT   +K+V   LA
Sbjct:  227 FNGAEVVEHKTFHRYTVRRKRGTAQSSHDSKG-RQAKSAGAHLRRYNEAALVQEVQELL-NSWQQLLDSCHFVFVRIPVANRAMFYSGKNAAFKKDDLRIRVIPFPTRRPTFSELKRVQQMLA 347          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108301.1767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0WWI0_9STRA5.490e-1947.01Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2G5B394_COERN1.450e-1840.48Uncharacterized protein n=1 Tax=Coemansia reversa ... [more]
A0A1Y1WL85_9FUNG2.370e-1742.74Uncharacterized protein n=1 Tax=Linderina pennispo... [more]
A0A8K1FJM6_PYTOL5.820e-1743.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WKI9_GLOUD8.020e-1743.90Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8H7KXK1_9AGAM3.850e-1644.07bVLRF1 domain-containing protein n=2 Tax=Athelia s... [more]
A0A484EA12_BRELC2.420e-1541.80Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0N7L385_PLAHL4.510e-1543.90Ankyrin repeat protein n=1 Tax=Plasmopara halstedi... [more]
A0A225X545_9STRA6.140e-1543.09Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A433SUT2_ELYCH6.340e-1543.09Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108301contigM-pyrifera_M_contig108301:49..612 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score94.0
Seed ortholog evalue5.3e-17
Seed eggNOG ortholog112098.XP_008604045.1
Preferred nameANKZF1
KEGG koko:K15271
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005829,GO:0006508,GO:0006511,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009636,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010498,GO:0012505,GO:0016020,GO:0019538,GO:0019867,GO:0019941,GO:0030163,GO:0030425,GO:0030433,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0034976,GO:0035690,GO:0035966,GO:0035967,GO:0036266,GO:0036477,GO:0036503,GO:0042175,GO:0042221,GO:0042493,GO:0042542,GO:0042995,GO:0043005,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044455,GO:0044463,GO:0044464,GO:0046677,GO:0050896,GO:0051603,GO:0051716,GO:0051788,GO:0070301,GO:0070887,GO:0071218,GO:0071236,GO:0071310,GO:0071630,GO:0071704,GO:0072671,GO:0097237,GO:0097447,GO:0097458,GO:0098588,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:0098827,GO:0120025,GO:0120038,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901700,GO:1901701
EggNOG free text desc.mitochondria-associated ubiquitin-dependent protein catabolic process
EggNOG OGsKOG2505@1,KOG2505@2759
EC3.6.4.12
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons2
Model size366
Cds size366
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.8941698-CDS-M-pyrifera_M_contig108301:48..1381622815592.8941698-CDS-M-pyrifera_M_contig108301:48..138Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108301 49..138 -
1692277478.565749-CDS-M-pyrifera_M_contig108301:48..1381692277478.565749-CDS-M-pyrifera_M_contig108301:48..138Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108301 49..138 -
1622815592.90498-CDS-M-pyrifera_M_contig108301:336..6121622815592.90498-CDS-M-pyrifera_M_contig108301:336..612Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108301 337..612 -
1692277478.58661-CDS-M-pyrifera_M_contig108301:336..6121692277478.58661-CDS-M-pyrifera_M_contig108301:336..612Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108301 337..612 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108301.1767.1prot_M-pyrifera_M_contig108301.1767.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108301 49..612 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108301.1767.1

>prot_M-pyrifera_M_contig108301.1767.1 ID=prot_M-pyrifera_M_contig108301.1767.1|Name=mRNA_M-pyrifera_M_contig108301.1767.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp
FVSGKCLVHKTFKRYTTRRKQGGAQSKHASSGGRSMASAGSWIRSNGEIK
LKEETRVLLARDWLHLLRGCSRIFVGAPKANRTLFLSSSPTARDPRVRFV
PFAFERPTMECVKQVYAQLAEA
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mRNA from alignment at M-pyrifera_M_contig108301:49..612-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108301.1767.1 ID=mRNA_M-pyrifera_M_contig108301.1767.1|Name=mRNA_M-pyrifera_M_contig108301.1767.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig108301:49..612- (Macrocystis pyrifera P11B4 male)
TTTGTCAGCGGCAAGTGCCTGGTGCACAAGACATTCAAGCGATACACCAC CCGCCGCAAGCAGGGCGGCGCGCAGAGCAAGCACGCCTCCTCTGGTGGCC GCTCGATGGCCAGCGCCGGTTCGTGGATCCGCAGCAACGGCGAAATCAAG CTGAAGGAGGAGACGCGCGTGCTGCTGGCCCGCGACTGGCTCCACCTCCT CCGCGGCTGCTCACGCATCTTCGTCGGCGCGCCAAAGGCGAACCGAACCC TCTTTCTCTCCTCCTCCCCCACCGCCGTCGCGTCGCGCGGGCTGTGTGAC CCTGTAGACTCCGCCCACGCCAGCCCCGCCGCTGAGGTCGTTGTGGCGGC CGATGAACGGGAGGAGACGGACGACGGTGCAGGTGCCGCAGCCGGGTCTG CGGCAGCGGCCGCGCCACTGCGCGTGCAGGTGCCCACCGTGTCGGCGGCG GTGAAGGACGGCATGCTGTACAAGCGGGACCCGCGCGTGCGGTTCGTGCC GTTCGCCTTTGAGCGGCCGACGATGGAGTGCGTGAAGCAGGTGTACGCAC AGCTGGCGGAGGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig108301:49..612-

>mRNA_M-pyrifera_M_contig108301.1767.1 ID=mRNA_M-pyrifera_M_contig108301.1767.1|Name=mRNA_M-pyrifera_M_contig108301.1767.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig108301:49..612- (Macrocystis pyrifera P11B4 male)
TTTGTCAGCGGCAAGTGCCTGGTGCACAAGACATTCAAGCGATACACCAC
CCGCCGCAAGCAGGGCGGCGCGCAGAGCAAGCACGCCTCCTCTGGTGGCC
GCTCGATGGCCAGCGCCGGTTCGTGGATCCGCAGCAACGGCGAAATCAAG
CTGAAGGAGGAGACGCGCGTGCTGCTGGCCCGCGACTGGCTCCACCTCCT
CCGCGGCTGCTCACGCATCTTCGTCGGCGCGCCAAAGGCGAACCGAACCC
TCTTTCTCTCCTCCTCCCCCACCGCCTTTGTCAGCGGCAAGTGCCTGGTG
CACAAGACATTCAAGCGATACACCACCCGCCGCAAGCAGGGCGGCGCGCA
GAGCAAGCACGCCTCCTCTGGTGGCCGCTCGATGGCCAGCGCCGGTTCGT
GGATCCGCAGCAACGGCGAAATCAAGCTGAAGGAGGAGACGCGCGTGCTG
CTGGCCCGCGACTGGCTCCACCTCCTCCGCGGCTGCTCACGCATCTTCGT
CGGCGCGCCAAAGGCGAACCGAACCCTCTTTCTCTCCTCCTCCCCCACCG
CCCGGGACCCGCGCGTGCGGTTCGTGCCGTTCGCCTTTGAGCGGCCGACG
ATGGAGTGCGTGAAGCAGGTGTACGCACAGCTGGCGGAGGCGCGGGACCC
GCGCGTGCGGTTCGTGCCGTTCGCCTTTGAGCGGCCGACGATGGAGTGCG
TGAAGCAGGTGTACGCACAGCTGGCGGAGGCG
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