mRNA_M-pyrifera_M_contig108272.1758.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A2D8CEL3_9BACT (Glycoside hydrolase family 5 n=5 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CEL3_9BACT) HSP 1 Score: 314 bits (805), Expect = 7.150e-102 Identity = 145/203 (71.43%), Postives = 170/203 (83.74%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 + WF+ FR NYVQE DIIAMKEWGADHIR PF++ +FYD++T+EF + FDRLD+LLVWCKR+RVDVILDMH APGAQ+D I+DSDG ARLWTE +TY PIT+K+W EIAR+YKDETIIIGYDL+NEPVTPDGYG DL R + + AIR+IDENHILFI GNY++TTFD L P DN+VYAFHKYWNET+QGTI YL Sbjct: 105 EEWFQLFRDNYVQEADIIAMKEWGADHIRFPFHYNLFYDIDTDEFIDEGFDRLDQLLVWCKRHRVDVILDMHAAPGAQNDGPISDSDGTARLWTESETYWPITVKVWEEIARQYKDETIIIGYDLINEPVTPDGYGGRDLARLYGQLTTAIRKIDENHILFIEGNYYATTFDFLT--PPFDDNMVYAFHKYWNETDQGTIQYL 305
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A3S5IWX2_9BACT (Carbohydrate-binding protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A3S5IWX2_9BACT) HSP 1 Score: 314 bits (804), Expect = 1.040e-101 Identity = 141/203 (69.46%), Postives = 171/203 (84.24%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 ++WF++FR NYV EEDIIAMKEWG DHIRVPF++ +FYD+++ F E F+R+D LL+WCKR+R+DVI DMH APGAQS+ EI+DSDGVAR WTE +TY P TIKIW EIARRYKDETI+IGYD++NEPVTPDGY DLL F++ I+PAIREID+NHILFI GNY++TTFD L P +N+VYAFHKYWNET+QGTI YL Sbjct: 105 EQWFKEFRDNYVTEEDIIAMKEWGVDHIRVPFHYDIFYDLQSGTFKESGFERMDNLLLWCKRHRIDVIFDMHAAPGAQSESEISDSDGVARFWTESETYWPXTIKIWEEIARRYKDETIVIGYDIINEPVTPDGYDGRDLLEFYSQIVPAIREIDQNHILFIEGNYYATTFDYL--YPPFDENMVYAFHKYWNETDQGTIQYL 305
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A2D7AE26_9BACT (Glycoside hydrolase family 5 n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D7AE26_9BACT) HSP 1 Score: 307 bits (787), Expect = 3.420e-99 Identity = 141/203 (69.46%), Postives = 168/203 (82.76%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 D+WFE FR NYV+E+DIIAMKEWG DHIR+PF++ +FYD +E F E+ F+R+D++L+WCKR+R+DVILDMH APGAQS IADSDGVAR WTE +TY P+TI IW E+ARRYKDETIIIGYD+LNEPVTP GYGA DL F+ I+PAIR ID NHILFI GNY++TTFD L P +N+VYAFHKYWNET+QGTI YL Sbjct: 102 DQWFELFRDNYVREDDIIAMKEWGVDHIRIPFHYDIFYDKNSETFIEKGFERIDQVLIWCKRHRMDVILDMHAAPGAQSAGPIADSDGVARFWTEKETYWPMTILIWEELARRYKDETIIIGYDILNEPVTPTGYGASDLRNFYDQIVPAIRAIDTNHILFIEGNYWATTFDEL--YPPFDNNMVYAFHKYWNETDQGTIQYL 302
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A3D1G7W6_9BACT (Glycoside hydrolase family 5 n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G7W6_9BACT) HSP 1 Score: 306 bits (783), Expect = 1.260e-98 Identity = 141/201 (70.15%), Postives = 168/201 (83.58%), Query Frame = 1 Query: 7 WFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 W ++FR N+V EEDI MKEWGADHIRVPF++ +FYD++ EF + FDR+DELL+WCKRNRVDVILDMH APGAQSD IADSDG AR WTE DTY PITIKIW ++A RYK+ETIIIGYDLLNEPVTP Y DL +F++ IIPA+R+ID+NHILFI GNY++TTFD +L+ P+ DN+VYAFHKYWNET+QGTI YL Sbjct: 101 WIKQFRDNFVTEEDIKTMKEWGADHIRVPFHYNLFYDIDKGEFIDEGFDRIDELLIWCKRNRVDVILDMHAAPGAQSDGPIADSDGTARFWTESDTYWPITIKIWEKLANRYKNETIIIGYDLLNEPVTPSPYSNIDLAKFYSQIIPAVRKIDKNHILFIEGNYYATTFD--HLMPPMDDNMVYAFHKYWNETDQGTIQYL 299
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A2T4XJW0_9BACT (Glycoside hydrolase family 5 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4XJW0_9BACT) HSP 1 Score: 305 bits (782), Expect = 2.080e-98 Identity = 140/203 (68.97%), Postives = 164/203 (80.79%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 ++WF++FR NYV E DIIAMKEWG DHIRVPF+ +FYD+ TE F E F+R+D LL WCKR+R+DVI DMH APGAQS+ EI+DSDG AR WTE + Y PITIKIW EIARRYKDETI+IGYD++NEPVTP GY DL RF+ I+PAIR ID+NHILFI GNY++TTFD L P DN+VYAFHKYWNET+QGTI YL Sbjct: 105 EQWFQEFRDNYVTEADIIAMKEWGVDHIRVPFHFDIFYDIPTESFKESGFERMDNLLKWCKRHRIDVIFDMHAAPGAQSESEISDSDGTARFWTESEIYWPITIKIWEEIARRYKDETIVIGYDIINEPVTPAGYDNTDLARFYGQIVPAIRAIDQNHILFIEGNYYATTFDYL--YPPFDDNMVYAFHKYWNETDQGTIQYL 305
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A2E6N5K5_9BACT (Glycoside hydrolase family 5 n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N5K5_9BACT) HSP 1 Score: 305 bits (781), Expect = 2.440e-98 Identity = 141/203 (69.46%), Postives = 167/203 (82.27%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 D+WFE FR NYV+E+DIIAMKEWG DHIR+PF+ +FYD E F E+ F+R++++L+WCKR+R+DVILDMH APGAQS IADSDGVAR WTE +TY P+TI IW E+ARRYKDETIIIGYD+LNEPVTP GYGA DL F+ I+PAIR ID+NHILFI GNY++TTFD L P DN+VYAFHKYWNET+QGTI YL Sbjct: 98 DQWFELFRDNYVKEDDIIAMKEWGVDHIRIPFHFDIFYDKTNEIFIEKGFERINQVLIWCKRHRMDVILDMHAAPGAQSAGPIADSDGVARFWTEKETYWPMTILIWEELARRYKDETIIIGYDILNEPVTPSGYGASDLRDFYDQIVPAIRAIDKNHILFIEGNYWATTFDEL--YPPFDDNMVYAFHKYWNETDQGTIQYL 298
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A3M8G2D2_9BACT (Carbohydrate-binding protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G2D2_9BACT) HSP 1 Score: 284 bits (727), Expect = 3.350e-90 Identity = 133/203 (65.52%), Postives = 157/203 (77.34%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 + W + FR NYV E+DI MK WG DH+R+PF++ +FYD+E F + F+R+DELLVWCKR+RVDVILDMH APGAQSD IADSDG AR WTE +TY PI I+IW +IARRYKDE IIIGYD++NEPVTP Y DL RF+ + AIR ID+NHILFI GNYF+TTFD L P DN+VYAFHKYWNET+QGTI YL Sbjct: 101 EEWTQLFRDNYVTEQDIEEMKAWGVDHVRIPFHYNLFYDIEAGGFIDEGFERIDELLVWCKRHRVDVILDMHAAPGAQSDGAIADSDGEARFWTESETYWPIAIEIWEKIARRYKDENIIIGYDIINEPVTPAPYDGRDLARFYGQAVTAIRAIDQNHILFIEGNYFATTFDYL--YPPFDDNMVYAFHKYWNETDQGTIQYL 301
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A3M1P115_9BACT (Carbohydrate-binding protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1P115_9BACT) HSP 1 Score: 259 bits (663), Expect = 1.270e-79 Identity = 126/205 (61.46%), Postives = 151/205 (73.66%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGY--GADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 DR+FE + NYV E D+ A+ +WG DHIR+PF+++VFYD +T+ F E F LD+ L WCK + VILDMH APGAQS+ IADSDGVARLWTE D Y +T+ IWTEIARRY +ET IIGYDL+NEPVTPD GA L + + AIR +D NHILFI GNY++TTFD+L P DN+VYAFHKYWNETNQGTI YL Sbjct: 104 DRFFEIYEANYVAEADVAAIADWGFDHIRLPFHYRVFYDPDTDTFREEGFALLDQFLAWCKTYGLYVILDMHAAPGAQSEGNIADSDGVARLWTEPDPYQDLTVAIWTEIARRYANETQIIGYDLINEPVTPDEIADGAQALRDLYERLAGAIRTVDPNHILFIEGNYYATTFDKL--FPPFDDNMVYAFHKYWNETNQGTIQYL 306
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A7Y2CN77_9BACT (Cellulase family glycosylhydrolase n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y2CN77_9BACT) HSP 1 Score: 242 bits (617), Expect = 5.740e-73 Identity = 117/203 (57.64%), Postives = 144/203 (70.94%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYGADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 + ++E + NYV E+D+ AM WG DH+R+PF++ FYD +T F E F LD L WC+ V VILDMH APGAQ+D I+DSDGVARLWTE + T++IWTEIARRY DE II+GYDL+NEPVTPDGY DDL + I AIR++D NHILFI GNY+ TTF + AP DN+VYAFHKYWN +QG+I YL Sbjct: 93 ETFYEIYEANYVDEKDVAAMASWGVDHLRLPFHYNNFYDPDTGTFKEDGFALLDRFLGWCRTYNVSVILDMHAAPGAQNDGPISDSDGVARLWTEPVPHQDQTVEIWTEIARRYADEPIIMGYDLINEPVTPDGY-FDDLWPLYARIAAAIRQVDTNHILFIEGNYYGTTFPAV---APFDDNMVYAFHKYWNGPDQGSIQYL 291
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Match: A0A7K1ZG14_9BACT (Cellulase family glycosylhydrolase n=1 Tax=Bacteroidetes bacterium SB0668_bin_1 TaxID=2604896 RepID=A0A7K1ZG14_9BACT) HSP 1 Score: 238 bits (608), Expect = 1.710e-71 Identity = 117/208 (56.25%), Postives = 146/208 (70.19%), Query Frame = 1 Query: 1 DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFDRLDELLVWCKRNRVDVILDMHGAPGAQSDKEIADSDGVARLWTEYDTYMPITIKIWTEIARRYKDETIIIGYDLLNEPVTPDGYG-----ADDLLRFHTDIIPAIREIDENHILFINGNYFSTTFDRLNLLAPVYDNIVYAFHKYWNETNQGTINYL 609 DR+FE +R YV E+DI A+ EWG DHIR+P ++ + +D +TE F E F+ +D L WC++ +DVILDMH APGAQS+ I+DSDG ARLWTE Y + IWTEIARRY D+ +IIGYDL+NEPVTP+ G AD L + + AIR+ID NHILFI GNYF+T F +L P DN+VYAFHKYWN T+ GTINYL Sbjct: 99 DRFFELYRAKYVAEKDIAAIAEWGFDHIRLPMHYNLLFDPDTETFIESGFELIDTFLDWCRKYELDVILDMHAAPGAQSEHNISDSDGEARLWTEPVPYQDQLVTIWTEIARRYVDDPLIIGYDLINEPVTPNSIGDDEVQADALRALYVRLAEAIRQIDTNHILFIEGNYFATHFYKLE--PPFDDNMVYAFHKYWNATDVGTINYL 304 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108272.1758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108272.1758.1 >prot_M-pyrifera_M_contig108272.1758.1 ID=prot_M-pyrifera_M_contig108272.1758.1|Name=mRNA_M-pyrifera_M_contig108272.1758.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp DRWFEKFRTNYVQEEDIIAMKEWGADHIRVPFNHKVFYDMETEEFNEREFback to top mRNA from alignment at M-pyrifera_M_contig108272:3..611+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108272.1758.1 ID=mRNA_M-pyrifera_M_contig108272.1758.1|Name=mRNA_M-pyrifera_M_contig108272.1758.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108272:3..611+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108272:3..611+ >mRNA_M-pyrifera_M_contig108272.1758.1 ID=mRNA_M-pyrifera_M_contig108272.1758.1|Name=mRNA_M-pyrifera_M_contig108272.1758.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig108272:3..611+ (Macrocystis pyrifera P11B4 male)back to top |