mRNA_M-pyrifera_M_contig108227.1755.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: A0A6G0JFB0_9STRA (Uncharacterized protein (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0JFB0_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 9.050e-15 Identity = 49/133 (36.84%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 1 VMGVWHRFEQQKADGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARAFDTLDNVVMVDEKWFFMKKN 399 V +W R+ GV + NSGRKR D E+ + +L VP+++R + VA GLS+ +R + +R + F+KP LT E K +RV+ AL ++ DR F++L NVV VDEKWF+ +N Sbjct: 46 VSTIWKRYAAAVEAGVPGGEWSSQIKRNSGRKRKDREEVRAKLATVPVEERAVERRVAAASGLSRHLVRQAVSEGMIRRRTTFIKPALTCENKLERVEHALSFIDDR---TLRFESLHNVVHVDEKWFYADRN 175
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 75.5 bits (184), Expect = 2.510e-13 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 79 GNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARAFDTLDNVVMVDEKWF 384 GN GRK ID ++ + Q++ +PL +R T ++A LG+S +R LK R S +KP LTEE + RV +AL + GG F + +VV +DEKWF Sbjct: 72 GNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWF 173
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: UPI0007EF58BD (uncharacterized protein LOC108198123 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF58BD) HSP 1 Score: 72.4 bits (176), Expect = 2.680e-12 Identity = 44/133 (33.08%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 1 VMGVWHRFEQQKADGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWV-RDRHGGARAFDTLDNVVMVDEKWFFMKK 396 V +W R + +G+++++ + + N GRKR+ V+ EQLK VPL KRTT + A + +S+ TL K +R S +KP+LT + K RV++ L + + F +++N++ +DEKWF++ K Sbjct: 4 VQRIWKRARETSINGMVDVS--HLKAKNCGRKRVQVDL--EQLKTVPLSKRTTIRSTAYAIKVSKSTLHRCFKDGKIRRNSNSIKPLLTNKNKENRVEFCLSMLDANSFPNNPRFVSMENMIHIDEKWFYLTK 132
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: UPI0007EF543B (uncharacterized protein LOC108212812 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF543B) HSP 1 Score: 72.4 bits (176), Expect = 3.200e-12 Identity = 44/138 (31.88%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 1 VMGVWHRFEQQKADGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWV------RDRHGGARAFDTLDNVVMVDEKWFFMKK 396 V +W + Q +G IN++ + R N GRKRI+++ EQ+K VPL +RT+ ++A + +S+ TL N K +R S +KP L + K R ++L + D H F +++++ +DEKWF++ K Sbjct: 132 VARIWKQATQSSNNGAINVSHK--RSKNCGRKRIEIDP--EQIKKVPLSRRTSLESLAYAINVSKSTLHRNFKSGRLRRHSNHVKPYLKDSNKKARAQFSLSMIDKSSLPHDPH-----FKDMNDMIHIDEKWFYISK 260
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: A0A0W8DPK2_PHYNI (HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DPK2_PHYNI) HSP 1 Score: 70.5 bits (171), Expect = 4.430e-12 Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 10 VWHRFEQQKADGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARAFDTLDNVVMVDEKWF 384 +W ++ + + NL + GN GRK ID ++ + Q++ +PL +R T ++A LG+S +R LK R S +KP LTEE + RV +AL + GG F + +VV +DEK F Sbjct: 72 LWELHKKTRTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKRF 196
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: W2QKX2_PHYPN (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QKX2_PHYPN) HSP 1 Score: 70.5 bits (171), Expect = 1.380e-11 Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 10 VWHRFEQQKADGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARAFDTLDNVVMVDEKWF 384 +W ++ + + NL + GN GRK ID ++ + Q++ +PL +R T ++A LG+S +R LK R S +KP LTEE + RV +AL + GG F + +VV +DEK F Sbjct: 49 LWELHKKTRTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKRF 173
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: A0A225VZR2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZR2_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.410e-11 Identity = 42/133 (31.58%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 1 VMGVWHRFEQQKADGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARAFDTLDNVVMVDEKWFFMKKN 399 V +W R++ ++G+ ++ SGRKR+D E+LK V L R + A G+S+ +R +K + + ++P LT E K R++ AL ++ D + F+T+++VV VDEKWF KN Sbjct: 44 VTKIWARYQTTSSNGISGGEWKSRIKEKSGRKRLDRVAAAEKLKQVSLDDRQVERRAAAAAGISRHLVRELMKEGVVSRKTTRIRPALTAENKLHRIESALAYIND---DSMNFETMEDVVHVDEKWFNEDKN 173
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: UPI0012635B1A (uncharacterized protein LOC116110731 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012635B1A) HSP 1 Score: 65.9 bits (159), Expect = 6.050e-10 Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 1 VMGVWHRFEQQKA-DGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARA---FDTLDNVVMVDEKWFFMKK 396 V +W R ++ + D N++ R + N GRKR++++ Q +++PL++RT+ +++ LS TL LK +R S +KP+L E R+ + L + HG + F T++N++ VDEKWF+M K Sbjct: 84 VQRIWQRGKENEVLDSSTNVSSR--KALNCGRKRLEIDV--SQFRNIPLRRRTSLRSLSAVTNLSVTTLFRRLKEGSIRRHSNAIKPLLNVENMKARIRFCLSMIE--HGNNPSCLRFVTMENIIHVDEKWFYMTK 213
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: UPI00126373FC (uncharacterized protein LOC116121497 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI00126373FC) HSP 1 Score: 65.1 bits (157), Expect = 9.510e-10 Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 1 VMGVWHRFEQQKA-DGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARA---FDTLDNVVMVDEKWFFMKK 396 V +W R ++ + D N++ R + N GRKR++++ Q +++PL++RT+ +++ LS TL LK +R S +KP+L E R+ + L + HG + F T++N++ VDEKWF+M K Sbjct: 4 VQRIWQRGKENEVLDSNTNVSSR--KALNCGRKRLEIDI--SQFRNIPLRRRTSLRSLSAVTNLSVTTLFRRLKEGSIRRHSNAIKPLLNVENMKARIRFCLSMIE--HGNNPSCLRFVTMENIIHVDEKWFYMTK 133
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Match: UPI001262DD8A (uncharacterized protein LOC116116357 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262DD8A) HSP 1 Score: 65.1 bits (157), Expect = 1.000e-9 Identity = 43/134 (32.09%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 10 VWHRFEQQKADGVI--NINLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRTTQSAVANHLGLSQQTLRNNLKHLGMRAASRFLKPVLTEEGKTKRVDWALRWVRDRHGGARA---FDTLDNVVMVDEKWFFMKK 396 V H +++ K + V+ N N+ + + N GRK + ++ Q + +PL++RTT +++ LS TL LK +R S +KP+L E R+ + L + HG + F T++N++ VDEKWF+M K Sbjct: 84 VQHIWQRGKENEVLDSNTNVSSRKALNCGRKHLQIDV--NQFRHIPLRRRTTLRSLSAATNLSVTTLFRRLKEGSIRRHSNAIKPLLNVENMKARIRFCLSMIE--HGNNPSCLRFVTMENIIHVDEKWFYMTK 213 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108227.1755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108227.1755.1 >prot_M-pyrifera_M_contig108227.1755.1 ID=prot_M-pyrifera_M_contig108227.1755.1|Name=mRNA_M-pyrifera_M_contig108227.1755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp MGVWHRFEQQKADGVININLRNNRGGNSGRKRIDVEKYKEQLKDVPLKKRback to top mRNA from alignment at M-pyrifera_M_contig108227:2..400- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108227.1755.1 ID=mRNA_M-pyrifera_M_contig108227.1755.1|Name=mRNA_M-pyrifera_M_contig108227.1755.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=399bp|location=Sequence derived from alignment at M-pyrifera_M_contig108227:2..400- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108227:2..400- >mRNA_M-pyrifera_M_contig108227.1755.1 ID=mRNA_M-pyrifera_M_contig108227.1755.1|Name=mRNA_M-pyrifera_M_contig108227.1755.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig108227:2..400- (Macrocystis pyrifera P11B4 male)back to top |