mRNA_M-pyrifera_M_contig108215.1754.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A9T848_PHYPA (Nocturnin (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T848_PHYPA) HSP 1 Score: 89.4 bits (220), Expect = 4.170e-19 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCEAKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVKLFSSEVV 345 LRV+ WNVLADGLA+SG F E K L W+HR PL++ + + D ++ L E H D L L+ GYVG + K PC + +K DGCA+ ++S R++L S+ + Sbjct: 41 LRVMQWNVLADGLAQSGDFDRVEKKFLEWNHRAPLLLGRILKDDPHVICLQELNHFDDFFLPELKRHGYVGEYWQK---PC----SAAQKFESPADGCAIFYKSSRLQLLKSDTI 148
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A2K1JZI7_PHYPA (Nocturnin n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JZI7_PHYPA) HSP 1 Score: 89.4 bits (220), Expect = 8.860e-19 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCEAKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVKLFSSEVV 345 LRV+ WNVLADGLA+SG F E K L W+HR PL++ + + D ++ L E H D L L+ GYVG + K PC + +K DGCA+ ++S R++L S+ + Sbjct: 41 LRVMQWNVLADGLAQSGDFDRVEKKFLEWNHRAPLLLGRILKDDPHVICLQELNHFDDFFLPELKRHGYVGEYWQK---PC----SAAQKFESPADGCAIFYKSSRLQLLKSDTI 148
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A7S3BQI8_9VIRI (Nocturnin n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BQI8_9VIRI) HSP 1 Score: 85.1 bits (209), Expect = 3.010e-17 Identity = 48/112 (42.86%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCEAKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLW---RSDRVKL 327 LRV+ +N LADGLA+ G F+ C+A+ L W R PL+ + RL DI+GL E D + LRA+GY +F K SPC+ K G DGC L W R +RV L Sbjct: 60 LRVLQFNTLADGLAQHGDFLRCDARSLQWGARQPLLEAEIFRLKPDIIGLQEVNRYDDWLEAALRARGYESVFLRKEESPCL-------KYGFPGDGCVLAWDAARFERVAL 164
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A2R6WLQ9_MARPO (Nocturnin n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WLQ9_MARPO) HSP 1 Score: 83.6 bits (205), Expect = 8.030e-17 Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFV-----HCEAKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVKLFSSEVV 345 LRV+ WNVLADGLA+ G F A LGW RGP +V + AD++ L E H D L LR +GY G F K +SP + + G DGCA+ +R+ R++L +VV Sbjct: 10 LRVMQWNVLADGLAQFGDFCCGGAERVPADVLGWGARGPKLVGAIVGASADVVCLQEVNHFEDFFLPELRQRGYDGTFVAKKLSPAL-------QYGCSPDGCAIFYRTSRLQLVQRDVV 122
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A813BW25_9DINO (Nocturnin n=3 Tax=Sar TaxID=2698737 RepID=A0A813BW25_9DINO) HSP 1 Score: 78.2 bits (191), Expect = 1.700e-14 Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCE--AKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVKLFSSEVV 345 LRV+ WNVLADGLA+ G F H + A++L W+ R P I+ + DAD++ L E H DT +L G G+ C GT ++GG DG A+L R R++L SS VV Sbjct: 19 LRVMTWNVLADGLAQHGNFAHIKEPARELSWEARAPGILATIESADADVVCLQECNHWHDTFEPHLCIAGPWS-----GVHTCA--GTAAERLGGDADGEAVLLRRSRLELLSSRVV 128
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A7R9Y286_9VIRI (Nocturnin n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y286_9VIRI) HSP 1 Score: 76.3 bits (186), Expect = 4.460e-14 Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCEAKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVKL 327 LRV+ +NVLADGLA++G F+ CE L + +R P++ + L ++GL E D + L+A+GY F K SPC K G DGC L W + R +L Sbjct: 38 LRVLQFNVLADGLAQNGEFLKCEPVHLEFAYRRPMLEAEIFGLQPHVIGLQEVNRYDDWLREALQARGYESRFLQKSPSPC-------EKFGFPADGCVLAWDAARFEL 139
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A388L3H5_CHABU (Nocturnin n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L3H5_CHABU) HSP 1 Score: 77.0 bits (188), Expect = 4.480e-14 Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCEAKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNL--RAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVK 324 +RV+ WN LADGLA++G FV L W R PL++ + R DAD + L E H D L R+ Y G F PK SP R+ G DGCA+ +R R + Sbjct: 536 VRVLQWNTLADGLAQTGDFVKAPLAALEWAGRAPLLLGEILRADADFICLQEVNHFHDFFAPKLKDRSDAYAGFFHPKMASPA-------RRFGFDCDGCAMFYRCRRFR 638
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A5A8E5V3_CAFRO (Nocturnin n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E5V3_CAFRO) HSP 1 Score: 75.5 bits (184), Expect = 1.280e-13 Identity = 47/117 (40.17%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCE--AKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVKLFSSEVV 345 LRV+ WNVLADGLA+ G F H + A++L W+ R P I+ + AD++ L E H DT +L G G+ C GT ++GG DG A+L R R++L SS VV Sbjct: 33 LRVMTWNVLADGLAQHGNFAHIKEPARELSWEARAPGILATIESAGADVVCLQECNHWHDTFEPHLCIAGPWS-----GVHTCA--GTAAERLGGDADGEAVLLRRSRLELLSSRVV 142
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A830HLP2_9CHLO (Nocturnin n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HLP2_9CHLO) HSP 1 Score: 74.3 bits (181), Expect = 2.600e-13 Identity = 49/139 (35.25%), Postives = 65/139 (46.76%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGF--VHCEAKDLGWDHRGPLIVDHLRRLDADILGLSEA-----------------------THVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDRVKLFSSEV 342 LR++ WN+LADGLA+ GGF V ++ L W HR PLI + AD++ EA T + T+ + A GY G FAPK SPCV K+G DG A+LW+ R +L V Sbjct: 25 LRILTWNILADGLAQDGGFDGVAPDSDTLTWTHRLPLICAEIANAGADVICFQEASRCFAPPETEQNEGEGQDDGSSPTPLWRTLEPVIAALGYDGCFAPKRPSPCV-------KLGAPPDGVAVLWKKSRCELVGEPV 156
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Match: A0A5J4XUY6_9CHLO (Nocturnin n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XUY6_9CHLO) HSP 1 Score: 73.2 bits (178), Expect = 4.840e-13 Identity = 40/106 (37.74%), Postives = 53/106 (50.00%), Query Frame = 1 Query: 1 LRVVWWNVLADGLAESGGFVHCEAKDLGWDHRGPLIVDHLRRLDADILGLSEATHVSDTILRNLRAKGYVGLFAPKGMSPCVPGGTDVRKVGGVVDGCALLWRSDR 318 L+++ WNVLADGLA+ G FV + L W R ++ + DI+ L E D L ++ GY G F K PC P + G DGCAL +RSDR Sbjct: 44 LKILQWNVLADGLAQHGDFVKVTQQALCWSSRAEKLLQQILEPQPDIVCLQEVNRYGDCFLPAMKKHGYTGAFFCK---PCSP----AEQYGASCDGCALFYRSDR 142 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108215.1754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108215.1754.1 >prot_M-pyrifera_M_contig108215.1754.1 ID=prot_M-pyrifera_M_contig108215.1754.1|Name=mRNA_M-pyrifera_M_contig108215.1754.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp LRVVWWNVLADGLAESGGFVHCEAKDLGWDHRGPLIVDHLRRLDADILGLback to top mRNA from alignment at M-pyrifera_M_contig108215:4..348- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108215.1754.1 ID=mRNA_M-pyrifera_M_contig108215.1754.1|Name=mRNA_M-pyrifera_M_contig108215.1754.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=345bp|location=Sequence derived from alignment at M-pyrifera_M_contig108215:4..348- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108215:4..348- >mRNA_M-pyrifera_M_contig108215.1754.1 ID=mRNA_M-pyrifera_M_contig108215.1754.1|Name=mRNA_M-pyrifera_M_contig108215.1754.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig108215:4..348- (Macrocystis pyrifera P11B4 male)back to top |