mRNA_M-pyrifera_M_contig10821.1753.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI) HSP 1 Score: 369 bits (946), Expect = 7.240e-119 Identity = 203/322 (63.04%), Postives = 231/322 (71.74%), Query Frame = 1 Query: 1 CVPETGWNSSIWNPHVSDDVAAAAPXXXXXXXXXVAWAAVGXXXXXXXGRGVK-LVSPQEEVLRQQAVATVFSRFQASVLGKELGIRAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLR--VGGGSS-----SKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 CVPETGWNSSIWNPHV + AAAP G G++ +VSPQEEVLRQQAVA VFSRFQ VLGKELGIR KNEMFERWQFS+KLKEGRGGDPILPA++FFDP LDAELQ LGVHK Q+RNLCCELGRASKS+LKTL +QLR V G ++ SKR A++ D NTYVLQLGKN+ LRMNSAHY+KM+ELF R+R G A +++ ++ P W DFHD LF+CLMRYEALQGGGFQAS+ GD FDVLL+ FG +MECFASPFNCRY+RYCSAF DTD PFG Sbjct: 49 CVPETGWNSSIWNPHVFEP--AAAPTVFGVASRT--------------GEGLRRVVSPQEEVLRQQAVAIVFSRFQ--VLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPSKRVAARKLDGNTYVLQLGKNK-----------LRMNSAHYDKMKELFSRSRVEGAA---RRQSSSTEHPPP-------AWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFG 331
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A6H5LQ06_9PHAE (PCIF1_WW domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ06_9PHAE) HSP 1 Score: 285 bits (730), Expect = 5.400e-88 Identity = 187/424 (44.10%), Postives = 206/424 (48.58%), Query Frame = 1 Query: 1 CVPETGWNSSIWNPHVSDDVAAAAPXXXXXXXXXVAWAAVGXXXXXXXGRGVK-LVSPQEEVLRQQAVATVFSRFQA------------------------------------------------------------------------------------------------------------SVLGKELGIRAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFGR 945 CVPETGWNSSIWNPHV + AAA G G GV+ +VSPQEEVLRQQAVA VFSRFQA VLGKELGIR KNEMFERWQFS+KLKEGRGGDPILPA++FFDP LDAELQ LGVHK Q+RNLCCELGRASKS+LKTL +Q+ A P LLRMNSAHY+KM+ELF R+R G A +SS P W DFHD LF+CLMRYEALQ AS+ GD FDVLL+ FG +MECFASPFNCRY+RYCSAF DTD PFGR Sbjct: 49 CVPETGWNSSIWNPHVFEPAAAAT----------------GFGVASRTGEGVRRVVSPQEEVLRQQAVAIVFSRFQARRKTRGACDSCLLPATPTAVAGGLFRLLRELGGQGGGAKDREIPGNPCVVLRAQGLMIYASLCNAHNGRGTLAFQTPRPSSGSLTPAVTAVAFVPPEHGVLPHASPAMQVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQV-----------AASMPV---------------------WLLRMNSAHYDKMKELFSRSRVEGAA-----RWQSSSTEHP-----PPAWIGDFHDCLFSCLMRYEALQ-----ASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGR 409
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A835YQ92_9STRA (Phosphorylated CTD interacting factor 1 WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ92_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.640e-58 Identity = 132/321 (41.12%), Postives = 171/321 (53.27%), Query Frame = 1 Query: 7 PETGWNSSIWNPHV---SDDVAAAAPXXXXXXXXXVAWAAVGXXXXXXXGRGVKLVSPQEEVLRQQAVATVFSRFQASVLGKELGIRAKNEMFERWQFSQKLKEGR------GGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 PE GWN ++WN V D +AAA P R +PQ E LRQQA+ + +RF A L ELG+R KN++FE+WQF QK +E G DP+LP AF D L A L+ G QA ELGRA++++L+ +QLR S + A A R D +TY + G++R LR+NSAHY+K+R L +G ++ + + + A FHD LFA L+RYE+L GGGFQA+ GD FDVLLR FG MECFASP N RYAR+C+AF DTD PFG Sbjct: 51 PERGWNKAVWNAGVCKPEDAIAAAMPD-----------------------RVAMQTTPQVECLRQQALTVLRARFAA--LTTELGVRVKNDVFEKWQFGQKARERATDGALPGDDPLLPRGAFRDGTLVAALEAAGADGAQAHVAVRELGRAARAALQVFNKQLRTLPPSR-RHATAARVDADTYCVSYGRHR-----------LRVNSAHYDKLRALHA---AHGSSSAQRQRXXXXXXXG-------ARAAAPFHDALFALLLRYESLAGGGFQAAAPGDVFDVLLRRFGADMECFASPLNARYARHCTAFPDTDAPFG 324
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A024TWC3_9STRA (PCIF1_WW domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWC3_9STRA) HSP 1 Score: 142 bits (357), Expect = 4.300e-35 Identity = 94/261 (36.02%), Postives = 132/261 (50.57%), Query Frame = 1 Query: 163 VSPQEEVLRQQAVATVFSRFQASVLGKELGI-RAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 VSP E+ RQ+ V + ++ A+V +LG+ + N +E WQF KL GDP++P L EL +G ++ A +C + + + ++L R GG K+ RP+D+ Y++ G G LR+N H +K+ LF R GAT + F D LF L+RYE+L GGGFQA+++ + FDVLLRHF MECFASPFN RY R+CSAF DTD+ FG Sbjct: 81 VSPAYELHRQKCVLKLKAKLHATV--DQLGLPKLPNSAYETWQFCSKLA-APDGDPLIPHADSDYAGLRDELVAIGANRHAANKICRAMTQEAHRVGQSLLRMTHGGG----KKRATIRPNDDHYLVSYG--------GTS---LRINKTHLDKLETLFGRHHAQAGATS----------------------ASQFPDFLFCLLLRYESLDGGGFQAALNEECFDVLLRHFKCNMECFASPFNSRYGRFCSAFLDTDRVFG 301
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A3M6VL48_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL48_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.070e-35 Identity = 92/261 (35.25%), Postives = 138/261 (52.87%), Query Frame = 1 Query: 163 VSPQEEVLRQQAVATVFSRFQASVLGKELGI-RAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 V+P E+ RQQ V + S+ + + +LGI + N ++E WQF+ +L + DP++P L EL++ G K+ A C EL + S+ L+ +Q V G + AV +D+T L GK+ ++++++AH+ K+REL+ R RG G + F LF L+RY++L GGGFQA+++ + FDVLL+ F KMECFASP NCRY+R+CSAF DTD FG Sbjct: 76 VNPAMEIARQQIVRALCSKVRCA--SADLGIGKLPNSIYETWQFTSQLTV-KEHDPLIPHAESDYSGLFEELRKAGATKSGATKKCKELTKESERMLRKFGQQDFVAGKKKVQVAVM---EDDTRHLTYGKS-----------MVKLSAAHFAKLRELYARKRGL----------------DDDGSSMAPKDQRQFESALFCLLLRYDSLSGGGFQAALNEECFDVLLKEFNCKMECFASPLNCRYSRFCSAFLDTDFVFG 303
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A3R7HJ33_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HJ33_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.950e-34 Identity = 87/261 (33.33%), Postives = 137/261 (52.49%), Query Frame = 1 Query: 163 VSPQEEVLRQQAVATVFSRFQASVLGKELGI-RAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 ++P E+ RQQ V T+ ++ + + ++LGI + N +E WQF+ KL DP++P L EL++ G K+ A C EL R S+ L+ ++Q V G K +D + L G + ++++++AH+ K+RE++ R + + G G + +F LF L+RY++L GGGFQA+++ + FDVLL++F KMECFASP N RY+R+CSAF DTD FG Sbjct: 72 INPAMEITRQQTVRTLCNKIRKA--SEDLGIGKLPNSAYETWQFTSKLTVSEH-DPLIPHAGSDYSGLFEELRKAGATKSGATKKCKELTRESERMLRKFSQQNFVAG--KKKHVHVAIAEDGMHQLTYGNS-----------VVKLSAAHFAKLREMYARKQDFSG----------------NGSSMVPKARHEFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKYFDAKMECFASPLNSRYSRFCSAFLDTDAAFG 300
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A329T4D0_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4D0_9STRA) HSP 1 Score: 136 bits (343), Expect = 5.570e-33 Identity = 88/263 (33.46%), Postives = 136/263 (51.71%), Query Frame = 1 Query: 157 KLVSPQEEVLRQQAVATVFSRFQASVLGKELGI-RAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 + V+P E+ RQQ V + ++ + + ++LGI + N +E WQF+ +L + DP++P L EL++ G K+ A C EL R S+ L+ +Q V G K+ V++ G + G +++++ H+ K+RE+F R +G G G ++ F LF L+RY++L GGGFQA+++ + FDVLL+ F KMECFASP NCRY+R+CSAF DTD FG Sbjct: 93 RAVNPAMEIARQQTVRALCNKIRRA--SEDLGIGKLPNSAYETWQFTSQLTV-KEHDPLIPHAGSDYSGLFEELRKAGATKSGATKKCKELTRESERMLRKFGQQDFVAG---------KKKKVQVAVMEDGMRQLTYGHST----VKLSADHFAKLREMFARKQGLG----------------DDGSNMAPKDQRQFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFG 323
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A6A3R028_9STRA (PCIF1_WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R028_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.520e-32 Identity = 90/261 (34.48%), Postives = 136/261 (52.11%), Query Frame = 1 Query: 163 VSPQEEVLRQQAVATVFSRFQASVLGKELGI-RAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 V+P E+ RQQ V + ++ + + ++LGI + N +E WQF+ +L + DP++P L EL++ G K+ A C EL R S+ L+ +Q V G K+ +D+ L G + +++++AH+ K+RE++ R G G TP R+ F LF L+RY++L GGGFQA+++ + FDVLL+ F KMECFASP NCRY+R+CSAF DTD FG Sbjct: 86 VNPAMEIARQQTVRALCNKIRRA--SEDLGIGKLPNAAYETWQFTSQLTV-KELDPLIPHAGSDYSGLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQDFVAG--KKKKVHVAAAEDDVRQLSYGNS-----------TVKLSAAHFAKLREMYARKLGMSGDG--SSMTPKHQRS--------------FESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFG 314
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: G4YF15_PHYSP (PCIF1_WW domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4YF15_PHYSP) HSP 1 Score: 133 bits (334), Expect = 2.350e-32 Identity = 90/257 (35.02%), Postives = 134/257 (52.14%), Query Frame = 1 Query: 178 EVLRQQAVATVFSRFQASVLGKELGI-RAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQ-ASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 E+ RQQ V + ++ + + ++LGI + N +E WQF+ +LK + DP++P L EL++ G K+ A C EL R S+ L+ +Q V G KR +D L G + +++++AH+ K+RE++ R +G GG P R+ F LF L+RY++L GGGFQ A+++ + FDVLL+ F KMECFASP NCRY+R+CSAF DTD FG Sbjct: 2 EIARQQTVRALCNKIRRA--SEDLGIGKLPNSAYETWQFTSQLKV-KELDPLIPHAGSDYSGLFEELRKAGATKSGATKKCKELTRESERLLRKFGQQDFVAG--KKKRVHVAAAEDGMRQLTYGNS-----------TVKLSAAHFAKLREMYARKQGLGGDG--SSMAPKDQRS--------------FESALFCLLLRYDSLDGGGFQQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDCAFG 226
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Match: A0A6A4A4B0_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4A4B0_9STRA) HSP 1 Score: 135 bits (340), Expect = 5.830e-32 Identity = 90/261 (34.48%), Postives = 136/261 (52.11%), Query Frame = 1 Query: 163 VSPQEEVLRQQAVATVFSRFQASVLGKELGI-RAKNEMFERWQFSQKLKEGRGGDPILPAKAFFDPALDAELQELGVHKTQARNLCCELGRASKSSLKTLTRQLRVGGGSSSKRAVAKRPDDNTYVLQLGKNRRVSGRGEDKGLLRMNSAHYEKMRELFRRARGYGGATGREKETPASSRTSPGGGDLESGWTADFHDRLFACLMRYEALQGGGFQASVDGDTFDVLLRHFGVKMECFASPFNCRYARYCSAFADTDKPFG 942 V+P E+ RQQ V + ++ + + ++LGI + N +E WQF+ +L + DP++P L EL++ G K+ A C EL R S+ L+ +Q V G K+ +D+ L G + +++++AH+ K+RE++ R G G TP R+ F LF L+RY++L GGGFQA+++ + FDVLL+ F KMECFASP NCRY+R+CSAF DTD FG Sbjct: 86 VNPAMEIARQQTVRALCNKIRRA--SEDLGIGKLPNAAYETWQFTSQLTV-KELDPLIPHAGSDYSGLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQDFVAG--KKKKVHVAAAEDDVRQLSYGNS-----------TVKLSAAHFAKLREMYARKLGMSGDG--SSMTPKHQRS--------------FESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFG 314 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10821.1753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10821.1753.1 >prot_M-pyrifera_M_contig10821.1753.1 ID=prot_M-pyrifera_M_contig10821.1753.1|Name=mRNA_M-pyrifera_M_contig10821.1753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=320bp CVPETGWNSSIWNPHVSDDVAAAAPAAAAATAGGVAWAAVGSGAGTGGGRback to top mRNA from alignment at M-pyrifera_M_contig10821:2163..10017- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10821.1753.1 ID=mRNA_M-pyrifera_M_contig10821.1753.1|Name=mRNA_M-pyrifera_M_contig10821.1753.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7855bp|location=Sequence derived from alignment at M-pyrifera_M_contig10821:2163..10017- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10821:2163..10017- >mRNA_M-pyrifera_M_contig10821.1753.1 ID=mRNA_M-pyrifera_M_contig10821.1753.1|Name=mRNA_M-pyrifera_M_contig10821.1753.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1920bp|location=Sequence derived from alignment at M-pyrifera_M_contig10821:2163..10017- (Macrocystis pyrifera P11B4 male)back to top |