mRNA_M-pyrifera_M_contig108206.1750.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A7S0JY37_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JY37_CAFRO) HSP 1 Score: 87.0 bits (214), Expect = 8.460e-20 Identity = 43/77 (55.84%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 1 GLQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSLA 231 GL I IENL+AT+D+FD +DL++N I R+ENFP LRRL+TLL SGN ++ + +GE LP L++LVL N +S+LA Sbjct: 28 GLGISVIENLSATRDQFDCLDLTENQIRRLENFPRLRRLQTLLASGNFISRISPRLGEFLPKLDTLVLAGNRISTLA 104
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A251UTI5_HELAN (Putative U2 small nuclear ribonucleoprotein A n=3 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251UTI5_HELAN) HSP 1 Score: 89.0 bits (219), Expect = 9.700e-20 Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 1 GLQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 G +IPEIENL AT+D+FD IDLSDN I ++ENFP L RL TLLL+ N +T ++ +GE LP L SLVLT N + +L Sbjct: 28 GNKIPEIENLGATEDQFDTIDLSDNEIVKLENFPNLNRLGTLLLNNNRITRINPNIGEFLPKLHSLVLTNNRLVNL 103
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A1I8BA30_MELHA (Uncharacterized protein n=1 Tax=Meloidogyne hapla TaxID=6305 RepID=A0A1I8BA30_MELHA) HSP 1 Score: 87.8 bits (216), Expect = 1.700e-19 Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 4 LQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 LQIP IENL TKD+FD IDLSDN I ++EN P L+RL TLLL N V ++ ++GE LP L +L LT N++S L Sbjct: 29 LQIPTIENLGVTKDQFDVIDLSDNNIRKLENMPKLKRLETLLLHNNRVEFIAKDIGENLPKLSTLALTNNNLSEL 103
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A6V7WG98_9BILA (Hypothetical protein n=3 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7WG98_9BILA) HSP 1 Score: 86.7 bits (213), Expect = 4.710e-19 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 4 LQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 LQIP IENL TKD+FD IDLSDN I ++EN P L+RL TLL+ N V ++ ++GE LP L +L LT N++S L Sbjct: 29 LQIPTIENLGVTKDQFDVIDLSDNNIRKLENLPKLKRLETLLVHNNRVEFIAKDIGENLPKLSTLALTNNNLSEL 103
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A5N6LEK6_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LEK6_9ASTR) HSP 1 Score: 89.0 bits (219), Expect = 6.360e-19 Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 1 GLQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 G +IPEIENL AT+D+FD IDLSDN I ++ENFP L RL TLLL+ N +T ++ +GE LP L SLVLT N + +L Sbjct: 370 GNKIPEIENLGATEDQFDTIDLSDNEIVKLENFPNLNRLGTLLLNNNRITRINPNIGEFLPKLHSLVLTNNRLVNL 445
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A2H9TFQ1_9FUNG (NAD(P)H-hydrate epimerase n=1 Tax=Paramicrosporidium saccamoebae TaxID=1246581 RepID=A0A2H9TFQ1_9FUNG) HSP 1 Score: 89.0 bits (219), Expect = 6.540e-19 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 7 QIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 +IP IENLA T+D++D +DL+DN I R+ENFP LRRLRTLL+S N +T +D+E+ +KLP LE LVL N + ++ Sbjct: 1078 KIPAIENLAITRDQYDTLDLTDNDIPRLENFPTLRRLRTLLVSNNKITRLDLEMMQKLPALEMLVLNNNPLGTV 1151
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A5A8BZG2_CAFRO (LRRcap domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BZG2_CAFRO) HSP 1 Score: 87.0 bits (214), Expect = 6.650e-19 Identity = 43/77 (55.84%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 1 GLQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSLA 231 GL I IENL+AT+D+FD +DL++N I R+ENFP LRRL+TLL SGN ++ + +GE LP L++LVL N +S+LA Sbjct: 27 GLGISVIENLSATRDQFDCLDLTENQIRRLENFPRLRRLQTLLASGNFISRISPRLGEFLPKLDTLVLAGNRISTLA 103
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: UPI00053A2A8A (U2 small nuclear ribonucleoprotein A' isoform X2 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A2A8A) HSP 1 Score: 85.5 bits (210), Expect = 8.400e-19 Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 1 GLQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 G +IP IENL AT+D+FD IDLSDN I ++ENFP L RL TLL++ N +T ++ +GE LP L SLVLT N + +L Sbjct: 28 GNKIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNL 103
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A7E4ZUW0_PANRE (Uncharacterized protein n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4ZUW0_PANRE) HSP 1 Score: 86.3 bits (212), Expect = 9.540e-19 Identity = 40/75 (53.33%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 4 LQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 +QIP IENL TKD FD +DL+DN I ++ENFPVLRRL LLL N + + +G +LP L++LVLT N++ L Sbjct: 29 MQIPAIENLGVTKDRFDVLDLTDNNIRKLENFPVLRRLEVLLLHNNRIQQIQKHIGRQLPSLKTLVLTNNNLQEL 103
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Match: A0A0L0HNE8_SPIPD (U2 small nuclear ribonucleoprotein A' n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HNE8_SPIPD) HSP 1 Score: 85.9 bits (211), Expect = 1.100e-18 Identity = 34/76 (44.74%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 1 GLQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTWVDVEVGEKLPGLESLVLTKNHVSSL 228 GL+IP++ENLA TKD D +DL+DN + R++ FP+++RL+ L++S N +T +D+++ ++LP L +L+L NH+ L Sbjct: 28 GLKIPQVENLAITKDSHDVVDLTDNDLRRLDGFPLMKRLKALMVSNNRITRIDLDLAKQLPNLNTLILNNNHIEEL 103 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108206.1750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108206.1750.1 >prot_M-pyrifera_M_contig108206.1750.1 ID=prot_M-pyrifera_M_contig108206.1750.1|Name=mRNA_M-pyrifera_M_contig108206.1750.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp GLQIPEIENLAATKDEFDAIDLSDNLISRVENFPVLRRLRTLLLSGNAVTback to top mRNA from alignment at M-pyrifera_M_contig108206:4..584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108206.1750.1 ID=mRNA_M-pyrifera_M_contig108206.1750.1|Name=mRNA_M-pyrifera_M_contig108206.1750.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=581bp|location=Sequence derived from alignment at M-pyrifera_M_contig108206:4..584- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108206:4..584- >mRNA_M-pyrifera_M_contig108206.1750.1 ID=mRNA_M-pyrifera_M_contig108206.1750.1|Name=mRNA_M-pyrifera_M_contig108206.1750.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig108206:4..584- (Macrocystis pyrifera P11B4 male)back to top |