mRNA_M-pyrifera_M_contig108203.1748.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108203.1748.1
Unique NamemRNA_M-pyrifera_M_contig108203.1748.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A518FRK6_9PLAN (D-galactarate dehydratase n=12 Tax=Planctomycetaceae TaxID=126 RepID=A0A518FRK6_9PLAN)

HSP 1 Score: 404 bits (1039), Expect = 5.460e-138
Identity = 198/203 (97.54%), Postives = 201/203 (99.01%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITP+VGQ LI+RIKWWE+YTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVT MVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG
Sbjct:  272 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPQVGQDLIDRIKWWEDYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTGMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 474          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A518A8N9_9PLAN (D-galactarate dehydratase n=3 Tax=Gimesia TaxID=1649453 RepID=A0A518A8N9_9PLAN)

HSP 1 Score: 404 bits (1038), Expect = 7.750e-138
Identity = 198/203 (97.54%), Postives = 201/203 (99.01%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQ LI+RIKWWE+YTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTAL+AVYRFAEPVTEKGFVIMDTPGYDPASVT MVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG
Sbjct:  272 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQDLIDRIKWWEDYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALQAVYRFAEPVTEKGFVIMDTPGYDPASVTGMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 474          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A355G630_9PLAN (Galactonate dehydratase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355G630_9PLAN)

HSP 1 Score: 395 bits (1016), Expect = 1.050e-136
Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVG+KLIERI+WWEEYTGKF VVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALR VYRFAEPVTEKGFVIMDTPGYDPASVT MVAGGANVV FTTGRGSCFGCKPVPSIKI+TNTPMFERM+DDMDLDAGRIL+G
Sbjct:  118 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGKKLIERIRWWEEYTGKFSVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALREVYRFAEPVTEKGFVIMDTPGYDPASVTGMVAGGANVVAFTTGRGSCFGCKPVPSIKISTNTPMFERMEDDMDLDAGRILHG 320          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A517VVE1_9PLAN (D-galactarate dehydratase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VVE1_9PLAN)

HSP 1 Score: 389 bits (1000), Expect = 4.410e-132
Identity = 189/203 (93.10%), Postives = 197/203 (97.04%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSELILGTECGGSDGNSGVTANPALGIASD LVAHGATSILGET EI+GGEHLLTRRA+TPE+G+KL++RIKWWEEYTGKFGVVIDNNPS GNKRGGLTTIYEKSLGAIAKGGSTALR VYRFAEPVTEKGFVIMDTPGYDPASVT MVAGGANVV FTTGRGSCFGCKPVPSIKI+TNTPM+ERMQDDMDLDAGRILNG
Sbjct:  272 PIPVSELILGTECGGSDGNSGVTANPALGIASDFLVAHGATSILGETPEIHGGEHLLTRRAVTPEIGKKLVDRIKWWEEYTGKFGVVIDNNPSVGNKRGGLTTIYEKSLGAIAKGGSTALREVYRFAEPVTEKGFVIMDTPGYDPASVTGMVAGGANVVTFTTGRGSCFGCKPVPSIKISTNTPMYERMQDDMDLDAGRILNG 474          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A2E0SP99_9PLAN (Galactonate dehydratase n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SP99_9PLAN)

HSP 1 Score: 362 bits (928), Expect = 3.460e-121
Identity = 173/203 (85.22%), Postives = 190/203 (93.60%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSELILG ECGGSDG SG+TANPALGIASDLLVAHGATSIL ET EIYGGEHLLTRRAITPEVGQKL++ + WWEEYTGKFG  IDNNPSPGNK+GGLTTIYEKSLGAIAKGGSTALR V+++AEPVT KGFV+MDTPGYDPASVT MVAGGANVV FTTGRGSCFGCKPVPSIKIATNTP++ER+ DDMD++AG+I++G
Sbjct:  272 PIPVSELILGCECGGSDGYSGITANPALGIASDLLVAHGATSILAETPEIYGGEHLLTRRAITPEVGQKLVDLMHWWEEYTGKFGTEIDNNPSPGNKKGGLTTIYEKSLGAIAKGGSTALRDVFKYAEPVTTKGFVVMDTPGYDPASVTGMVAGGANVVAFTTGRGSCFGCKPVPSIKIATNTPLYERLGDDMDVNAGKIVDG 474          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A518CIV3_9PLAN (D-galactarate dehydratase n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CIV3_9PLAN)

HSP 1 Score: 358 bits (919), Expect = 7.940e-120
Identity = 169/202 (83.66%), Postives = 189/202 (93.56%), Query Frame = 1
Query:    4 IPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            IPVSE++LG ECGGSDG SG+TANPALGIASDLLVAHGATSILGET EIYGGEHLLTRRAITPEVGQKL++ + WWE+YTGKFG  IDNNPSPGNK+GGLTTIYEKSLGAIAKGGSTAL+ V+++AEPVT +GFV+MDTPGYDPASVT MVAGGANVV FTTGRGSCFGCKPVPSIKIATNTP++ERM DDMD +AG+I++G
Sbjct:  273 IPVSEIMLGCECGGSDGYSGITANPALGIASDLLVAHGATSILGETPEIYGGEHLLTRRAITPEVGQKLVDLMHWWEDYTGKFGTQIDNNPSPGNKKGGLTTIYEKSLGAIAKGGSTALQGVFKYAEPVTSRGFVVMDTPGYDPASVTGMVAGGANVVAFTTGRGSCFGCKPVPSIKIATNTPLYERMSDDMDFNAGKIVDG 474          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A517ZU34_9PLAN (D-galactarate dehydratase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZU34_9PLAN)

HSP 1 Score: 358 bits (918), Expect = 1.090e-119
Identity = 171/203 (84.24%), Postives = 188/203 (92.61%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSELILG ECGGSDGNSGVTANPALGIASDLL+AHG TSIL ET EI GGEH LTRRA T EVG+KLIER++WWEEYT KFGV I+NNPSPGNK+GGLTTIYEKSLGAIAKGG TAL+AVY++AEPVTEKGFV MD+PGYDPASVT MVAGGANVV FTTGRGSCFGCKPVPSIK+ATNTPM+ERM DDMD++AG++L+G
Sbjct:  271 PIPVSELILGCECGGSDGNSGVTANPALGIASDLLIAHGGTSILAETPEICGGEHTLTRRAATKEVGEKLIERVRWWEEYTAKFGVEINNNPSPGNKKGGLTTIYEKSLGAIAKGGRTALKAVYQYAEPVTEKGFVFMDSPGYDPASVTGMVAGGANVVVFTTGRGSCFGCKPVPSIKVATNTPMYERMVDDMDINAGKVLDG 473          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A517Z536_9PLAN (D-galactarate dehydratase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z536_9PLAN)

HSP 1 Score: 352 bits (902), Expect = 3.040e-117
Identity = 170/203 (83.74%), Postives = 183/203 (90.15%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSELIL TECGGSDGNSGVTANPALGIASDLLVAHG T IL E  EIYGGEHLLTRRA TPE+GQKL+ERI+WWE+Y  KF   IDNNPS GNKRGGLTTIYEKSLGAIAK GSTAL+ VY +AEPVT KGFV+MDTPGYDP SVT MVAGGANVV FTTGRGSCFGCKPVP+IK+ATNTPM+ERM+DDMDL+AGRIL+G
Sbjct:  273 PIPVSELILATECGGSDGNSGVTANPALGIASDLLVAHGGTVILSEVPEIYGGEHLLTRRARTPEIGQKLLERIRWWEKYAKKFDATIDNNPSVGNKRGGLTTIYEKSLGAIAKAGSTALQDVYEYAEPVTSKGFVVMDTPGYDPPSVTGMVAGGANVVVFTTGRGSCFGCKPVPTIKVATNTPMYERMRDDMDLNAGRILDG 475          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A2E8FM63_9PLAN (Galactonate dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FM63_9PLAN)

HSP 1 Score: 346 bits (888), Expect = 4.870e-115
Identity = 166/202 (82.18%), Postives = 186/202 (92.08%), Query Frame = 1
Query:    4 IPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            IPV+ELILGTECGGSDGNSGVTANPA+GIASDLLVAHGATSILGET EIYGGEHLLTRRAI+ EVG+KL+  I WW++Y GKFG  IDNNPS GNK GGLTTIYEKSLGAIAKGG+TAL+ VYR+A+PVT +GFV+MDTPGYDPAS+T MVAGGANV+ FTTGRGSCFGCKPVP+IKIA+NTPM+ERM DDMD++AGRIL G
Sbjct:  281 IPVAELILGTECGGSDGNSGVTANPAVGIASDLLVAHGATSILGETPEIYGGEHLLTRRAISREVGEKLVGLIDWWKDYAGKFGAKIDNNPSVGNKLGGLTTIYEKSLGAIAKGGTTALKEVYRYADPVTARGFVVMDTPGYDPASITGMVAGGANVLIFTTGRGSCFGCKPVPTIKIASNTPMYERMIDDMDVNAGRILEG 482          
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Match: A0A7W0RP53_9PLAN (Altronate dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0RP53_9PLAN)

HSP 1 Score: 346 bits (888), Expect = 5.320e-115
Identity = 165/203 (81.28%), Postives = 183/203 (90.15%), Query Frame = 1
Query:    1 PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEIYGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGGLTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTCMVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRILNG 609
            PIPVSEL+LG ECGGSDG SGVTANPALG+ASDLLVAHG T+IL ETSEIYGGEH LTRRA++ EVG+KL++ I+WWE+Y G FGV IDNNPSPGNK GGLTTIYEKSLGAIAKGGSTALR VY +AEPVTEKGFV MDTPG+DPASVT MVAGGAN+V FTTGRGSCFGCKPVPS+KI TNTP ++RM DDMD+DAG IL+G
Sbjct:  283 PIPVSELMLGLECGGSDGYSGVTANPALGLASDLLVAHGGTAILAETSEIYGGEHTLTRRAVSREVGEKLLDLIRWWEKYAGMFGVEIDNNPSPGNKAGGLTTIYEKSLGAIAKGGSTALRGVYHYAEPVTEKGFVFMDTPGFDPASVTGMVAGGANLVAFTTGRGSCFGCKPVPSLKICTNTPTYDRMSDDMDIDAGVILSG 485          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108203.1748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518FRK6_9PLAN5.460e-13897.54D-galactarate dehydratase n=12 Tax=Planctomycetace... [more]
A0A518A8N9_9PLAN7.750e-13897.54D-galactarate dehydratase n=3 Tax=Gimesia TaxID=16... [more]
A0A355G630_9PLAN1.050e-13695.57Galactonate dehydratase (Fragment) n=1 Tax=Plancto... [more]
A0A517VVE1_9PLAN4.410e-13293.10D-galactarate dehydratase n=2 Tax=Gimesia aquarii ... [more]
A0A2E0SP99_9PLAN3.460e-12185.22Galactonate dehydratase n=1 Tax=Planctomyces sp. T... [more]
A0A518CIV3_9PLAN7.940e-12083.66D-galactarate dehydratase n=1 Tax=Polystyrenella l... [more]
A0A517ZU34_9PLAN1.090e-11984.24D-galactarate dehydratase n=3 Tax=Symmachiella Tax... [more]
A0A517Z536_9PLAN3.040e-11783.74D-galactarate dehydratase n=1 Tax=Maioricimonas ra... [more]
A0A2E8FM63_9PLAN4.870e-11582.18Galactonate dehydratase n=1 Tax=Planctomycetaceae ... [more]
A0A7W0RP53_9PLAN5.320e-11581.28Altronate dehydratase n=1 Tax=Planctomycetaceae ba... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108203contigM-pyrifera_M_contig108203:2..610 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score396.7
Seed ortholog evalue6.3e-108
Seed eggNOG ortholog344747.PM8797T_25876
Preferred nameuxaA
KEGG rclassRC00543
KEGG koko:K01685,ko:K16849
KEGG ReactionR01540
KEGG Pathwayko00040,ko01100,map00040,map01100
KEGG ModuleM00631
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM D-galactarate dehydratase Altronate hydrolase
EggNOG OGs2IY7Y@203682,COG2721@1,COG2721@2
EC4.2.1.7
COG Functional cat.G
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size609
Cds size609
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.0294318-CDS-M-pyrifera_M_contig108203:1..6101622815592.0294318-CDS-M-pyrifera_M_contig108203:1..610Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108203 2..610 -
1692277478.1889517-CDS-M-pyrifera_M_contig108203:1..6101692277478.1889517-CDS-M-pyrifera_M_contig108203:1..610Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108203 2..610 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108203.1748.1prot_M-pyrifera_M_contig108203.1748.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108203 2..610 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108203.1748.1

>prot_M-pyrifera_M_contig108203.1748.1 ID=prot_M-pyrifera_M_contig108203.1748.1|Name=mRNA_M-pyrifera_M_contig108203.1748.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp
PIPVSELILGTECGGSDGNSGVTANPALGIASDLLVAHGATSILGETSEI
YGGEHLLTRRAITPEVGQKLIERIKWWEEYTGKFGVVIDNNPSPGNKRGG
LTTIYEKSLGAIAKGGSTALRAVYRFAEPVTEKGFVIMDTPGYDPASVTC
MVAGGANVVCFTTGRGSCFGCKPVPSIKIATNTPMFERMQDDMDLDAGRI
LNG
back to top

mRNA from alignment at M-pyrifera_M_contig108203:2..610-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108203.1748.1 ID=mRNA_M-pyrifera_M_contig108203.1748.1|Name=mRNA_M-pyrifera_M_contig108203.1748.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=609bp|location=Sequence derived from alignment at M-pyrifera_M_contig108203:2..610- (Macrocystis pyrifera P11B4 male)
CCAATCCCGGTTTCCGAGCTCATTCTGGGCACCGAATGCGGCGGCAGTGA CGGGAACAGCGGCGTGACCGCGAACCCGGCCCTGGGAATCGCCAGCGACC TGCTCGTCGCTCACGGCGCGACCTCCATCCTGGGAGAAACCTCCGAAATC TATGGTGGCGAACACCTTCTGACACGTCGCGCCATCACGCCGGAAGTCGG TCAGAAACTGATCGAGCGGATTAAATGGTGGGAAGAATACACGGGCAAAT TCGGCGTGGTGATCGATAATAACCCCTCACCGGGTAACAAAAGAGGTGGT CTGACCACGATTTATGAGAAATCACTGGGAGCCATCGCCAAGGGGGGCAG CACCGCGCTGCGAGCCGTCTACCGCTTTGCAGAACCGGTCACCGAAAAGG GTTTCGTCATTATGGATACCCCCGGCTACGACCCTGCTTCCGTCACCTGC ATGGTGGCCGGAGGTGCGAATGTGGTCTGCTTTACCACAGGCCGGGGCAG CTGTTTTGGCTGTAAGCCGGTCCCCAGCATCAAAATCGCCACCAATACCC CCATGTTCGAACGCATGCAGGATGACATGGACCTCGACGCAGGTCGCATC CTGAACGGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig108203:2..610-

>mRNA_M-pyrifera_M_contig108203.1748.1 ID=mRNA_M-pyrifera_M_contig108203.1748.1|Name=mRNA_M-pyrifera_M_contig108203.1748.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig108203:2..610- (Macrocystis pyrifera P11B4 male)
CCAATCCCGGTTTCCGAGCTCATTCTGGGCACCGAATGCGGCGGCAGTGA
CGGGAACAGCGGCGTGACCGCGAACCCGGCCCTGGGAATCGCCAGCGACC
TGCTCGTCGCTCACGGCGCGACCTCCATCCTGGGAGAAACCTCCGAAATC
TATGGTGGCGAACACCTTCTGACACGTCGCGCCATCACGCCGGAAGTCGG
TCAGAAACTGATCGAGCGGATTAAATGGTGGGAAGAATACACGGGCAAAT
TCGGCGTGGTGATCGATAATAACCCCTCACCGGGTAACAAAAGAGGTGGT
CTGACCACGATTTATGAGAAATCACTGGGAGCCATCGCCAAGGGGGGCAG
CACCGCGCTGCGAGCCGTCTACCGCTTTGCAGAACCGGTCACCGAAAAGG
GTTTCGTCATTATGGATACCCCCGGCTACGACCCTGCTTCCGTCACCTGC
ATGGTGGCCGGAGGTGCGAATGTGGTCTGCTTTACCACAGGCCGGGGCAG
CTGTTTTGGCTGTAAGCCGGTCCCCAGCATCAAAATCGCCACCAATACCC
CCATGTTCGAACGCATGCAGGATGACATGGACCTCGACGCAGGTCGCATC
CTGAACGGCCCAATCCCGGTTTCCGAGCTCATTCTGGGCACCGAATGCGG
CGGCAGTGACGGGAACAGCGGCGTGACCGCGAACCCGGCCCTGGGAATCG
CCAGCGACCTGCTCGTCGCTCACGGCGCGACCTCCATCCTGGGAGAAACC
TCCGAAATCTATGGTGGCGAACACCTTCTGACACGTCGCGCCATCACGCC
GGAAGTCGGTCAGAAACTGATCGAGCGGATTAAATGGTGGGAAGAATACA
CGGGCAAATTCGGCGTGGTGATCGATAATAACCCCTCACCGGGTAACAAA
AGAGGTGGTCTGACCACGATTTATGAGAAATCACTGGGAGCCATCGCCAA
GGGGGGCAGCACCGCGCTGCGAGCCGTCTACCGCTTTGCAGAACCGGTCA
CCGAAAAGGGTTTCGTCATTATGGATACCCCCGGCTACGACCCTGCTTCC
GTCACCTGCATGGTGGCCGGAGGTGCGAATGTGGTCTGCTTTACCACAGG
CCGGGGCAGCTGTTTTGGCTGTAAGCCGGTCCCCAGCATCAAAATCGCCA
CCAATACCCCCATGTTCGAACGCATGCAGGATGACATGGACCTCGACGCA
GGTCGCATCCTGAACGGC
back to top