mRNA_M-pyrifera_M_contig108200.1746.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A7X5WVW0_9ACTN (Chaperone protein DnaJ n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WVW0_9ACTN) HSP 1 Score: 291 bits (745), Expect = 1.680e-95 Identity = 144/204 (70.59%), Postives = 160/204 (78.43%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRGKAGKGDLLATVVVSVPDALTDEQRQA 612 G+ETTI+LTSEA+C TC GTG+ PG P V DENQGLFSFSRPC ACGGRGS+ITD E+RPRDVKVRIPAGV+TGQ+IRLKGRG PGR GGPPGDLFVRV V DHPLFGRSG DLT+D+PITF+EAALGA VKVPTL + VT+RIPPGT TGKTFRL+GK G GDLL TV V+VPD LT +QR A Sbjct: 146 GIETTISLTSEASCSTCSGTGSAPGXAPSRCQACDGRGVHDENQGLFSFSRPCPACGGRGSVITDXXXXXXXXXAEIRPRDVKVRIPAGVRTGQRIRLKGRGAPGRDGGPPGDLFVRVKVRDHPLFGRSGSDLTLDLPITFSEAALGAKVKVPTLHGEVVTMRIPPGTPTGKTFRLKGKGGAGDLLVTVTVTVPDNLTADQRAA 349
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A6B1AUA5_9ACTN (Chaperone protein DnaJ n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AUA5_9ACTN) HSP 1 Score: 277 bits (709), Expect = 4.890e-90 Identity = 139/204 (68.14%), Postives = 158/204 (77.45%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRGKAGKGDLLATVVVSVPDALTDEQRQA 612 GLET I+LTSEATC C GTG++PGS P V DENQGLFSFSRPC +CGGRGS+I+ RG G EVRPR+VKVRIPAGVKTGQKIRLK RG PG GGPPGDLFV V V H LFGRSGKDLT++VPITF+EAALGA+VKVPTL+ + V IRIPPGT +GKTFRL+G+ G GDLL TV V+VP L+ +QR A Sbjct: 147 GLETAISLTSEATCSGCGGTGSEPGSPPSKCESCDGKGVHDENQGLFSFSRPCQSCGGRGSVISSXXXXXRGSGSEVRPREVKVRIPAGVKTGQKIRLKKRGAPGWGGGPPGDLFVHVNVKQHELFGRSGKDLTLEVPITFSEAALGANVKVPTLNGEVVKIRIPPGTVSGKTFRLKGRGGAGDLLVTVAVAVPQELSTQQRDA 350
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: UPI001E3408DA (molecular chaperone DnaJ n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E3408DA) HSP 1 Score: 260 bits (665), Expect = 3.460e-83 Identity = 130/209 (62.20%), Postives = 153/209 (73.21%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRG-----KAGKGDLLATVVVSVPDALTDEQRQA 612 G+ T++ LTS+A C TCHG+GAKPG+ P V D+NQGLFSFS PCA CGG G+++TDPCPTCRG GVE R R+VKVRIPAGV GQ+IRLKGRGG GR GGP GDLFV V V P+FGR G +LTI VP+TF EAALG ++ VPTLD VT+++P GT +GK R+RG K GDLL TV V+VPD LTDEQRQA Sbjct: 157 GVTTSLHLTSDAACSTCHGSGAKPGTVPTTCGQCQGRGVLDDNQGLFSFSTPCANCGGTGTVVTDPCPTCRGAGVERRAREVKVRIPAGVDDGQRIRLKGRGGAGRHGGPAGDLFVLVHVDPDPVFGRDGTNLTITVPVTFTEAALGTNLTVPTLDGSTVTLKLPGGTPSGKVMRVRGRGVETKKTTGDLLVTVQVAVPDTLTDEQRQA 365
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A538CWC9_9ACTN (Chaperone protein DnaJ n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CWC9_9ACTN) HSP 1 Score: 258 bits (659), Expect = 2.130e-82 Identity = 126/209 (60.29%), Postives = 156/209 (74.64%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRGKA---GK--GDLLATVVVSVPDALTDEQRQA 612 G+ T + LTS+A C TC G+G++PG+ P+ V DENQG FSFS+PC CGGRG IITDPCP CRG G R R+VKVR+PAGV GQ+IRLKGRG PGR GP GDLFV V V+ H LFGR G +LT++VP+TFAEAALG+D+KVPTLD +PVTIRIPPGT +G+T R++G+ G+ GDLL TV V+VP L+ E+R+A Sbjct: 147 GVTTAVHLTSDAACETCKGSGSRPGTVPQTCTACNGRGVTDENQGFFSFSQPCRVCGGRGRIITDPCPDCRGSGTRRRAREVKVRVPAGVDDGQRIRLKGRGEPGRNNGPAGDLFVTVRVSPHELFGRKGDNLTLEVPVTFAEAALGSDIKVPTLDGEPVTIRIPPGTRSGRTLRVKGRGIDHGRRVGDLLVTVDVAVPTKLSAEERRA 355
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A7W1HJ12_9ACTN (Chaperone protein DnaJ n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1HJ12_9ACTN) HSP 1 Score: 253 bits (647), Expect = 1.300e-80 Identity = 128/210 (60.95%), Postives = 149/210 (70.95%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRGKA------GKGDLLATVVVSVPDALTDEQRQA 612 GL TT+ LTS+A C TCHG+GA+PG+TP+ V D+NQGLFSFS PC CGG G++I DPCPTCRG GVE RPR+V+ RIPAGV Q IRLKGRG PGR GGP GDL V + VA H FGR+G DLT+ VPI FA+AALGADV VPTLD VT+RI GT +G R+RGK GDL+ TV V+VP AL DEQR+A Sbjct: 147 GLTTTLHLTSDAQCSTCHGSGARPGTTPKLCPQCGGRGVIDDNQGLFSFSTPCRRCGGGGTVIEDPCPTCRGAGVEKRPREVQARIPAGVSDAQTIRLKGRGAPGRNGGPHGDLLVAIHVAPHARFGRAGNDLTVRVPIAFADAALGADVAVPTLDGSDVTLRIKAGTQSGSRHRVRGKGIDTAKGAVGDLIVTVDVAVPTALNDEQRRA 356
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A6I3FDF5_9ACTN (Chaperone protein DnaJ n=2 Tax=root TaxID=1 RepID=A0A6I3FDF5_9ACTN) HSP 1 Score: 253 bits (647), Expect = 1.750e-80 Identity = 124/209 (59.33%), Postives = 153/209 (73.21%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRG-----KAGKGDLLATVVVSVPDALTDEQRQA 612 G+ T++ +TS+ C TC G+GAKPG+ P D+NQG+FSFS PC ACGG G++ITDPCPTCRG G+E RPR+VKVRIPAGV GQ+IRLKGRGG GR GGP GDLFV V V+ P+FGRSG++LT+ VP++FAEA LG + VPTLD VT++IPPGT +G+ FR++G K GDLL TV V VP LTDEQR+A Sbjct: 156 GVTTSLHITSDMPCETCRGSGAKPGTAPSACSRCGGRGAVDDNQGMFSFSTPCNACGGAGTVITDPCPTCRGAGIERRPREVKVRIPAGVDDGQRIRLKGRGGAGRNGGPIGDLFVVVHVSPDPVFGRSGRNLTMTVPVSFAEATLGTKLTVPTLDGANVTLKIPPGTPSGQVFRVKGRGVEEKKATGDLLVTVQVVVPTTLTDEQREA 364
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A349B6C7_9ACTN (Chaperone protein DnaJ n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B6C7_9ACTN) HSP 1 Score: 246 bits (627), Expect = 1.490e-77 Identity = 125/209 (59.81%), Postives = 152/209 (72.73%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRGKA----GK-GDLLATVVVSVPDALTDEQRQA 612 G+ T + LTSEA C C G GA+PG+TP V D+NQG FSFS+PC C GRG+I+ PC CRG G+E RPR+VKVR+PAGV+ GQ+IRLKGRGGPGR GGPPGDL V V V H LFGRSG DLT+ VP+TFAEAALGAD++VPTLD +PV IR+P GT +GK FR+ GK GK G LL T+ V+VP L+ ++R+A Sbjct: 150 GVTTAVHLTSEAACSRCSGNGAEPGTTPLVCTNCGGRGVLDDNQGFFSFSQPCPTCQGRGTIVETPCTNCRGSGIEHRPREVKVRVPAGVQDGQRIRLKGRGGPGRNGGPPGDLHVIVHVGAHSLFGRSGDDLTLTVPVTFAEAALGADIEVPTLD-EPVKIRVPAGTKSGKVFRVGGKGVSRNGKTGSLLVTIEVAVPAKLSRDERKA 357
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: UPI001AA06AFE (molecular chaperone DnaJ n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA06AFE) HSP 1 Score: 245 bits (626), Expect = 1.990e-77 Identity = 124/209 (59.33%), Postives = 151/209 (72.25%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRGKA-----GKGDLLATVVVSVPDALTDEQRQA 612 G+ TT+ L S+A C TCHG+GA+PGS P+ V +ENQGLFSFS PC ACGGRG+II D GVE R R+V+VRIPAGV GQ+IRLKGRGGPGR GGPPGDLFVRV V PLFGR+G++LT+ VPITF EAALG + VPTLD + VT++IP GT +GK FR++G+ G GDLL TV ++VP L+ EQR+A Sbjct: 147 GVTTTVPLVSDAPCSTCHGSGARPGSAPQICPQCHGRGVLEENQGLFSFSTPCPACGGRGTIIADXXXXXXXTGVERRRREVRVRIPAGVDDGQRIRLKGRGGPGRNGGPPGDLFVRVHVERDPLFGRAGRNLTLTVPITFDEAALGTRLTVPTLDGEKVTLKIPAGTPSGKVFRVKGRGVPDRKGVGDLLVTVQIAVPTKLSPEQREA 355
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A6N2DRJ1_9ACTN (Chaperone protein DnaJ n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DRJ1_9ACTN) HSP 1 Score: 245 bits (626), Expect = 2.100e-77 Identity = 124/213 (58.22%), Postives = 147/213 (69.01%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRG-------KAGK--GDLLATVVVSVPDALTDEQRQA 612 G+ TT+ LTS+A C TCHG+GAKPG+ P+ V D+NQGLFSFS PC AC GRG++IT PCPTC G G E RPR V+ RIPAGV Q IRLKGRG PGR GGP GDL V + V H LFGRSG DLT+ VP+T+AE LGAD+ VPTL+ D VT+R+ PGT G R+RG K+G GDL+ TV V +P LTDEQR+A Sbjct: 147 GITTTLHLTSDAPCSTCHGSGAKPGTAPQACSQCGGRGVLDDNQGLFSFSSPCRACQGRGTVITSPCPTCGGSGSERRPRQVQARIPAGVSDRQTIRLKGRGAPGRNGGPAGDLLVELHVTPHRLFGRSGNDLTVKVPVTYAELVLGADIDVPTLEGDRVTVRLKPGTPDGSRHRVRGRGITTTKKSGTVTGDLIVTVEVVIPTDLTDEQREA 359
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Match: A0A538JVJ6_9ACTN (Chaperone protein DnaJ n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JVJ6_9ACTN) HSP 1 Score: 243 bits (620), Expect = 1.380e-76 Identity = 122/209 (58.37%), Postives = 147/209 (70.33%), Query Frame = 1 Query: 1 GLETTITLTSEATCHTCHGTGAKPGSTPEXXXXXXXXXVQDENQGLFSFSRPCAACGGRGSIITDPCPTCRGIGVEVRPRDVKVRIPAGVKTGQKIRLKGRGGPGRLGGPPGDLFVRVTVADHPLFGRSGKDLTIDVPITFAEAALGADVKVPTLDADPVTIRIPPGTATGKTFRLRGKA-----GKGDLLATVVVSVPDALTDEQRQA 612 G+ TT+ LTSEA CHTC G+GA PG++P V +ENQGLFSFS+ +++ PCPTC G GVE R R V+VR+PAGV GQ+IRLKGRGG GR GG PGDLFV VTV HPLFGR G+DLT+ VPITFAEAALGA + VPTLD VT+++PPGT +GKTFR++G+ G GDLL V V+VP LT +RQA Sbjct: 143 GITTTVHLTSEAVCHTCRGSGAAPGTSPSICPQCGGRGVLEENQGLFSFSQAXXXXXXXXTVVETPCPTCAGTGVERRARQVRVRVPAGVDDGQRIRLKGRGGAGRNGGAPGDLFVTVTVGSHPLFGRKGRDLTLSVPITFAEAALGAHISVPTLDGS-VTLKVPPGTRSGKTFRVKGRGVPHAKGAGDLLVAVEVAVPQKLTTAERQA 350 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108200.1746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108200.1746.1 >prot_M-pyrifera_M_contig108200.1746.1 ID=prot_M-pyrifera_M_contig108200.1746.1|Name=mRNA_M-pyrifera_M_contig108200.1746.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp GLETTITLTSEATCHTCHGTGAKPGSTPETCKVCHGKGVQDENQGLFSFSback to top mRNA from alignment at M-pyrifera_M_contig108200:3..614- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108200.1746.1 ID=mRNA_M-pyrifera_M_contig108200.1746.1|Name=mRNA_M-pyrifera_M_contig108200.1746.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig108200:3..614- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108200:3..614- >mRNA_M-pyrifera_M_contig108200.1746.1 ID=mRNA_M-pyrifera_M_contig108200.1746.1|Name=mRNA_M-pyrifera_M_contig108200.1746.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig108200:3..614- (Macrocystis pyrifera P11B4 male)back to top |