mRNA_M-pyrifera_M_contig108187.1742.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A518A4L2_9PLAN (Multidrug resistance protein MdtC n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518A4L2_9PLAN) HSP 1 Score: 379 bits (972), Expect = 5.680e-122 Identity = 198/204 (97.06%), Postives = 204/204 (100.00%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPIT+SQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALK++NINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVRE++GATVH+RDIANVVDGEKERTELTR Sbjct: 69 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITVSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKRDNINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREEAGATVHIRDIANVVDGEKERTELTR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A518IAK2_9PLAN (Multidrug resistance protein MdtC n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IAK2_9PLAN) HSP 1 Score: 362 bits (928), Expect = 1.630e-115 Identity = 191/204 (93.63%), Postives = 198/204 (97.06%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 QTLSSVSG+ENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVAD PIIYLGLNSELDPITL++LTENQIIPQFEQLEGVARLRMRGGI REIQI LDRSKLESLNMGVNEV+NALK+ENINQPAGNYEEGNLNL IRSQGEFTSLEQIE+TVVRE SGATVHVRDIA VVDGE+ERTELTR Sbjct: 69 QTLSSVSGVENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADSPIIYLGLNSELDPITLTRLTENQIIPQFEQLEGVARLRMRGGIIREIQIQLDRSKLESLNMGVNEVINALKKENINQPAGNYEEGNLNLHIRSQGEFTSLEQIEDTVVREASGATVHVRDIAEVVDGEQERTELTR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A517V9T1_9PLAN (Multidrug resistance protein MdtC n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V9T1_9PLAN) HSP 1 Score: 359 bits (921), Expect = 1.730e-114 Identity = 187/204 (91.67%), Postives = 198/204 (97.06%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 Q LSSVSGIENILSSSMEGSSTVRLQFQWGTDL LAINEVRD+LNKLRN LPEGAEDPYIRHFDVADRPI+YLGLNS+LDPITL++LTENQIIPQFEQLEGVAR+RMRG IEREIQI+LDRSKLESLNMGVNEV+NALKQENINQPAGNYEEG+LNL IRSQGEFTSL+QIENTVVREQ+GATVHVRDIA VVDGEKERTELTR Sbjct: 69 QNLSSVSGIENILSSSMEGSSTVRLQFQWGTDLNLAINEVRDSLNKLRNKLPEGAEDPYIRHFDVADRPILYLGLNSDLDPITLTRLTENQIIPQFEQLEGVARVRMRGAIEREIQINLDRSKLESLNMGVNEVINALKQENINQPAGNYEEGHLNLHIRSQGEFTSLDQIENTVVREQAGATVHVRDIAEVVDGEKERTELTR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A517WWC5_9PLAN (Multidrug resistance protein MdtC n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WWC5_9PLAN) HSP 1 Score: 350 bits (897), Expect = 5.610e-111 Identity = 180/204 (88.24%), Postives = 199/204 (97.55%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 QTLSSV+G+ENILSSS+EGSSTVRLQFQWGTDL LAINEVRD+LNKLRNSLPEGAEDPYIRHFDVAD PIIY GLNSELDPITL+++TENQIIPQFEQL+GVAR+RMRGGIEREIQI+LDRSKLESLNMGVNEV+NAL+Q+NINQPAGN+EEG+LNL IRSQGEFTSLEQIENTVVRE++GATV VRD+A+VVDGEKERTELTR Sbjct: 69 QTLSSVAGVENILSSSVEGSSTVRLQFQWGTDLNLAINEVRDSLNKLRNSLPEGAEDPYIRHFDVADSPIIYFGLNSELDPITLTRVTENQIIPQFEQLDGVARVRMRGGIEREIQINLDRSKLESLNMGVNEVINALQQDNINQPAGNFEEGHLNLHIRSQGEFTSLEQIENTVVREKAGATVRVRDVADVVDGEKERTELTR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A2E7D5S3_9PLAN (Acriflavin resistance protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D5S3_9PLAN) HSP 1 Score: 242 bits (618), Expect = 5.500e-71 Identity = 115/204 (56.37%), Postives = 165/204 (80.88%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 Q LSS+ G E + SSS EGSS++R++F W +L A+ ++R + +LR LP+ + PY+R +D+AD PIIYLGL S+LD I L++LTE ++PQ E+++GVA +R+RGG+ REIQ+DLDR KLE+L+MGVNE+V +L+ +N+NQPAG++E+G+LNLL+RS+GEF SL++IENTV+RE+SGA V +RDIA +DGE+ RTE+TR Sbjct: 69 QVLSSIQGAEELQSSSTEGSSSIRVRFAWNANLDSAVGDMRAKIERLRAKLPDDVDPPYVRRYDIADSPIIYLGLVSDLDIIPLTRLTETIVVPQLERIDGVASVRIRGGVRREIQVDLDRQKLEALSMGVNEIVESLRSQNVNQPAGDFEQGHLNLLVRSRGEFQSLKEIENTVIRERSGAVVRLRDIAKTIDGEERRTEMTR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: UPI00141F0779 (efflux RND transporter permease subunit n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00141F0779) HSP 1 Score: 222 bits (566), Expect = 8.750e-64 Identity = 104/204 (50.98%), Postives = 157/204 (76.96%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 Q L V G+E + S+S+EGSS ++ QF WGT+L ++++R + ++R LP+ + PYI FDVAD P +YL L SEL+P+ L+Q TE +IIP+ E+++GVA +R+RG + REIQ+ LDR KLE+LN+G+ EVV+ L+QEN+N+PAG +E G+LNLL+RSQG+F +L++I TV+R+++GA V ++D+A +VDG +E TE+TR Sbjct: 69 QALGGVQGVERLTSTSLEGSSIIQCQFAWGTNLDTVMSDMRARIERIREFLPDQIQSPYIERFDVADFPFVYLALKSELEPVKLTQYTEREIIPRLERIQGVAAVRLRGAVRREIQVALDRGKLETLNIGIAEVVDVLQQENVNRPAGYFESGHLNLLLRSQGQFENLDEIAETVIRQENGALVRLKDVAEIVDGHEEITEITR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A517Z5U0_9PLAN (Multidrug resistance protein MdtC n=2 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z5U0_9PLAN) HSP 1 Score: 220 bits (561), Expect = 4.280e-63 Identity = 110/204 (53.92%), Postives = 161/204 (78.92%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 QTLSSV+G + + S S+EGSST+R+QF+WG +L AI ++R A++K+R +LP+ + PYIR +DV D PI+YLG++SEL PI L++L E I+P+ E+L+GVAR+ +RG + REIQ+ +DR+KLES+ MGVNEVV+AL+ N++ PAG+++EG++ LIRS+ EFTSL++I + V+R + A V VRD+A VVDG +E T+LTR Sbjct: 54 QTLSSVNGFDRLSSHSLEGSSTIRVQFRWGINLDSAIADMRQAIDKVRANLPDEIDPPYIRRYDVNDSPIMYLGMSSELSPIELTRLAERTIVPRLERLDGVARVGLRGEVRREIQVQVDRAKLESMQMGVNEVVSALELGNVSLPAGDFDEGHVQRLIRSRTEFTSLDEIRDQVIRRREDAVVRVRDVAEVVDGHEEITQLTR 257
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A3E0Q7M0_9BACT (AcrB/AcrD/AcrF family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q7M0_9BACT) HSP 1 Score: 214 bits (544), Expect = 9.740e-61 Identity = 105/204 (51.47%), Postives = 155/204 (75.98%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 Q LSSV+G E + S ++EGSS++R+QFQWGT+L AI ++R A++K+R+ LP+ + P I +DV D P++YLG+ SEL + L++ E +IP+ E+L+GVAR+ MRG + REIQ++LDR+KLE+L MGVNEV+ AL N+NQPAG+Y+EG L L+RS+ EF +L+ + + VVR ++ A V +RD+A+VVDG +E T+LTR Sbjct: 69 QALSSVNGFERLSSRNLEGSSSIRVQFQWGTNLDTAIADMRQAIDKMRDELPDDIDPPVIERYDVNDSPVMYLGVQSELPLVDLTRFVERNVIPRLERLDGVARVGMRGEVRREIQVNLDRAKLEALGMGVNEVITALAAGNVNQPAGDYDEGGLQRLVRSRTEFETLDDVGDVVVRRRTDALVRIRDVADVVDGHEEITQLTR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A517QIJ6_9PLAN (Multidrug resistance protein MdtC n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QIJ6_9PLAN) HSP 1 Score: 213 bits (542), Expect = 1.950e-60 Identity = 105/204 (51.47%), Postives = 156/204 (76.47%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 Q LSSVSG E + S S+EGSS+VR+QF+WG DL +A++E+R A++K+R + P+ E PY+R +D PIIYL LNSEL+ L+Q E IIP+ E+L+GVAR+ MRG ++REI +D+DR+KLESL++GV++VV AL++ N+++PAG++EEG+L+ LIRS+ EF +L+QI + V++ SG + V+D+A VVD + T+ TR Sbjct: 69 QVLSSVSGFERLTSRSLEGSSSVRVQFKWGADLDVAVDEMRQAIDKIRQAFPDDVEMPYLRRYDANGSPIIYLSLNSELEVTKLTQFAERAIIPRLERLDGVARVGMRGEVKREIHVDIDRAKLESLSIGVDQVVQALEEGNVSKPAGDFEEGHLHRLIRSRSEFQTLDQIRDLVIQRTSGTVIRVKDVAEVVDSHERITQRTR 272
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Match: A0A2E8FES3_9PLAN (Acriflavin resistance protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FES3_9PLAN) HSP 1 Score: 211 bits (537), Expect = 8.690e-60 Identity = 102/204 (50.00%), Postives = 148/204 (72.55%), Query Frame = 1 Query: 1 QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSLPEGAEDPYIRHFDVADRPIIYLGLNSELDPITLSQLTENQIIPQFEQLEGVARLRMRGGIEREIQIDLDRSKLESLNMGVNEVVNALKQENINQPAGNYEEGNLNLLIRSQGEFTSLEQIENTVVREQSGATVHVRDIANVVDGEKERTELTR 612 Q LSSV G E + S+S EG S VR++ WG DL +A+N++R A+ K+R LP + P+ R +D +D PIIYLGL S+L P+ + E +I+P+ E+L GV R+R+RG + REIQ+DLDR KLE+LN+ VN VV++L+++N+NQPAG+++EGN+ L+RS G+F L+QI T+VRE GA V + DI V DG +ERT+++R Sbjct: 69 QVLSSVKGTEELSSNSAEGVSNVRVRMTWGADLDVAVNDMRQAVQKIRQQLPTEVDGPFFRRYDESDSPIIYLGLESDLSPVETTLRAEIEIVPELEKLPGVGRVRLRGAVRREIQVDLDRQKLEALNLPVNTVVDSLRRQNVNQPAGDFDEGNVQRLVRSHGQFRDLDQIGRTIVREHEGAVVTINDIGRVTDGIEERTDVSR 272 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108187.1742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108187.1742.1 >prot_M-pyrifera_M_contig108187.1742.1 ID=prot_M-pyrifera_M_contig108187.1742.1|Name=mRNA_M-pyrifera_M_contig108187.1742.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp QTLSSVSGIENILSSSMEGSSTVRLQFQWGTDLTLAINEVRDALNKLRNSback to top mRNA from alignment at M-pyrifera_M_contig108187:3..614- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108187.1742.1 ID=mRNA_M-pyrifera_M_contig108187.1742.1|Name=mRNA_M-pyrifera_M_contig108187.1742.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig108187:3..614- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108187:3..614- >mRNA_M-pyrifera_M_contig108187.1742.1 ID=mRNA_M-pyrifera_M_contig108187.1742.1|Name=mRNA_M-pyrifera_M_contig108187.1742.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig108187:3..614- (Macrocystis pyrifera P11B4 male)back to top |