mRNA_M-pyrifera_M_contig10818.1738.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: D8LFG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG5_ECTSI) HSP 1 Score: 254 bits (650), Expect = 2.290e-79 Identity = 156/236 (66.10%), Postives = 167/236 (70.76%), Query Frame = 1 Query: 1 VFAGHEKKVSCVMFTTSGKAVVTGSDDATVRVWAPRTGECRHAFSGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVHCDAGEGSVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGVTKLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDMRLVDLRTQQGAAAAAAAVPTVGVDCPVLLVTASDDSTSKVFRWPSPQA 708 VFAGHE KVS GFHVG++TCLASHP+ AQ+ LVMSGGEDGTAR+MHVQNKRVVGTMVHCDAG GSVEAVGFCATHPWVATGGTDGG+KVWD+VSGTCRH C HPA VT+LEWHPAAXXXXXXXXXXXXXXXXXXXXXXTS+ TGHTDMILDMRLVD R+Q AA A SDD+ SKVFRWPSP A Sbjct: 219 VFAGHESKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHVGSVTCLASHPNHAQAALVMSGGEDGTARVMHVQNKRVVGTMVHCDAGAGSVEAVGFCATHPWVATGGTDGGMKVWDTVSGTCRHTCLHPAAVTRLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSLFTGHTDMILDMRLVDPRSQ---AAGAXXXXXXXXXXXXXXXXXSDDNASKVFRWPSPGA 451
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A0A421F6J9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F6J9_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.160e-43 Identity = 81/184 (44.02%), Postives = 97/184 (52.72%), Query Frame = 1 Query: 61 VVTGSDDATVRVWAPRTGECRHAFSGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVH-------------CDAGEGSVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGVTKLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDMRLV 573 +VTGS D TVRVW P+TGEC H F GHG H G IT ++ HP PL +SG +DGTAR++ VQ KRV+ T+ H E SVE GFC T W ATG G L++WD + CRH+C HPAGV KL WHP L GHTDM+LDM + Sbjct: 183 IVTGSSDTTVRVWNPKTGECNHVFRGHGSHEGPITFISCHPT---QPLTISGSQDGTARLLQVQTKRVLATLSHDADPILAGTVNETATTTENSVECGGFCNTMNWAATGCLGGFLRIWDLATYQCRHICRHPAGVIKLLWHPTQPIVYSCTVEGLIYVWDARTGQLLKTLAGHTDMVLDMTFI 363
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A0A835YY67_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY67_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.630e-36 Identity = 77/170 (45.29%), Postives = 88/170 (51.76%), Query Frame = 1 Query: 1 VFAGHEKKVSCVMFTTSGKAVVTGSDDATVRVWAPRTGECRHAFSGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVHC-----------------------DAGEG----SVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGV 429 VFAGHE +V+ FT+SGK GFH G +TCLA HPDP Q+ LV+SG EDGTAR++H Q KRV+ T VH DA E SVEAVGFCA PW ATGG DG LK+WD SG CRH C HPAG+ Sbjct: 214 VFAGHEGRVNAGAFTSSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFHEGPVTCLAVHPDPEQAHLVLSGSEDGTARLVHAQTKRVLATFVHSANVAAAXXXXXXXXXXXXXXXXXDAMEAEASFSVEAVGFCAVRPWCATGGADGNLKIWDLQSGLCRHTCRHPAGI 383
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A0A7S1CXQ7_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXQ7_CYCTE) HSP 1 Score: 133 bits (335), Expect = 1.260e-34 Identity = 80/211 (37.91%), Postives = 110/211 (52.13%), Query Frame = 1 Query: 1 VFAGHEKKVSCVMFTTSGKAVVTGSDDATVRVWAPRTGECRHAFSGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVHCD----AGEG------SVEAVGFCATHP-WVATGGTDGGLKVWDSVS-GTCRHMCTHPA-----------GVTKLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDM 564 VF GHE V+ FT G++ +T S D T+RVWAPRTG C+H F G + + CLA+ + LV+ G E+G A + H+ +K+VV T+ H + AGE S+EAVGF A++P W ATGG DG +KVWD + CR +C A G+T+L WH +A +LTGHTD+I D+ Sbjct: 29 VFVGHESGVTAGSFTPDGRSALTASADGTLRVWAPRTGVCKHIFR-FGDNGAGLNCLATGGG-SDGQLVIVGSENGQAHVCHISSKKVVATLHHYEVPNQAGEEQMDLPTSIEAVGFAASNPNWCATGGADGAIKVWDLANRAQCRQVCRPEAAQDGQEAGATVGITRLRWHDSAPVLVSSMVDGSVQIWDARNGQRVKLLTGHTDVINDL 237
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A0A3M6VL09_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL09_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.490e-33 Identity = 78/200 (39.00%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 133 SGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVH--------------CDAGEGSVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGVTKLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDMRLVDLRTQQGAAAAAAAVPTVGVDCPVLLVTASDDSTSKVFR 690 + HGFH G +T +A HP PLV+SG +DGTAR+M VQ KR++ H A E SVE GFC T W ATG G L++WD + CRH+C HPAGV KL WHPA L GHTDM+LDM + A VP G L+TASDD + ++FR Sbjct: 277 NSHGFHEGPVTFIACHPS---QPLVISGSQDGTARLMQVQTKRILAAFSHEGIDPSVAGTVNDNSSATENSVECGGFCNTMNWAATGCLGGYLRIWDLATNQCRHVCRHPAGVIKLLWHPAQPIVYSCTVEGLVYVWDARTGQLLKTLAGHTDMVLDMTFIP---------AFDGVPVAG------LLTASDDESVRLFR 458
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A0A7S2SSY9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSY9_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.050e-31 Identity = 86/256 (33.59%), Postives = 113/256 (44.14%), Query Frame = 1 Query: 1 VFAGHEKKVSCVMFTTSGKAVVTGSDDATVRVWAPRTGECRHAFSGHGFHVGAITCLASHP------------DPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVHC-----------DAGEG-SVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGVT--KLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDMRLVDLRTQQGAAAAAAAVPTVGVDCPVLLVTASDDSTSKVFR 690 VFAGHE V+ +FT G+ V GFH GA+TCLA+HP + + L+MSG EDG A+++H+ +KR+V + H +AGEG SVE V C PW ATGG DG KVWD SG RH P GV KL WHP+ LTGH +M+LD++ + R G L++++SDD T+KVFR Sbjct: 241 VFAGHEGAVTSGIFTPDGRTVXXXXXXXXXXXXXXXXXXXXXXXXXXGFHEGAVTCLAAHPKWDSGTSAADGSSDSSNHLIMSGSEDGYAKLLHLGSKRIVASFAHSPGISQEGTVDEEAGEGFSVEDVDLCGVQPWAATGGVDGFCKVWDISSGRLRHSLQIPEGVAVVKLRWHPSQALIVTASADGVVRLWDARQGLMAKELTGHRNMLLDLQPLWGRDGDGEEGD-------------LVLSSSDDQTAKVFR 483
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A0A6U2LRQ4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2LRQ4_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.310e-30 Identity = 81/239 (33.89%), Postives = 111/239 (46.44%), Query Frame = 1 Query: 1 VFAGHEKKVSCVMFTTSGKAVVTGSDDATVRVWAPRTGECRHAF---SGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVHCDAGE--GSVEAVGFC---ATHPWVATGGTDGGLKVWDSVSGTCRHMCTH--PAGVTKLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDMRLVDLRTQQGAAAAAAAVPTVGVDCPVLLVTASDDSTSKVF 687 VF GHE +V+ FT GK V+ DAT+RVWAP+TG R+ F S F GA L ++G DG A I+H+ NKRV+ +++HC AG SVEAVGF WVATGG +G LK+WD + CR C+H +T+++WH +TGH D++ D+ + Q G P ++V SDD T + F Sbjct: 250 VFVGHEGEVNAGCFTVDGKWAVSCGSDATLRVWAPKTGLSRYVFRNGSDVRFSDGAPLLCLDVGGGTDQQLAIAGAADGLAWIVHLGNKRVITSLMHCAAGGELASVEAVGFAPAAVNANWVATGGVNGDLKIWDLTNNQCRQTCSHGEKVAITRMKWHSTMPLIYTAASDGALRLWDARSGILLHKMTGHLDVVNDLDVKFGAVQSGE--------------PDIVVAGSDDRTVRGF 474
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A8IL73_CHLRE (Predicted protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8IL73_CHLRE) HSP 1 Score: 124 bits (312), Expect = 6.410e-30 Identity = 94/232 (40.52%), Postives = 124/232 (53.45%), Query Frame = 1 Query: 1 VFAGHEKKVSCVMFTTSGKAVVT--GSDDATVRVWAPRTGECRHAFSGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVHCDAGEGSVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGVTKLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDMRLVDLRTQQGAAAAAAAVPTVGVDCPVLLVTASDDSTSKVFR 690 VF+GH VS FT GK+VV+ G DDA++RVW P+TGEC GH FH G I C+ H D + ++G EDG I ++ RV G +V E SVEAVG A P A+ DG L++WD + + R C HP+ VT++ WHP XXXXXXXXXXXXXXX GH D + D+ A+ G +L+T SDD T++V++ Sbjct: 205 VFSGHCGIVSAGCFTPDGKSVVSVGGEDDASLRVWNPKTGECSLTIQGHPFHTGGINCVGLHKDG--NGAAITGDEDGIVCISNIATGRVGGRLV---GHEDSVEAVGLSAHLPLAASASLDGTLRIWDCGTLSQRGSCEHPSSVTRMCWHPTEPXXXXXXXXXXXXXXXLRTNSCVRTYGGHEDAVQDI----------------AISADGT----MLLTGSDDGTARVYK 411
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: H3GXG4_PHYRM (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=H3GXG4_PHYRM) HSP 1 Score: 123 bits (308), Expect = 2.370e-29 Identity = 73/197 (37.06%), Postives = 89/197 (45.18%), Query Frame = 1 Query: 142 GFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVH--------------CDAGEGSVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGVTKLEWHPAAXXXXXXXXXXXXXXXXXXXXXXTSVLTGHTDMILDMRLVDLRTQQGAAAAAAAVPTVGVDCPVLLVTASDDSTSKVFR 690 GFH G +T + HP PL +SG +DGTAR++ VQ KRV+ T+ H A E SVE GFC T W ATG G L++WD + CRH C HPAGV KL WHP L GHTDM+LDM + P G L+TASDD + + FR Sbjct: 232 GFHEGPVTFVVCHPS---QPLSLSGSQDGTARLIQVQTKRVLATLSHDNIDPSVAGTVNDTATATENSVECGGFCNTMNWAATGCLGGYLRIWDLATNQCRHACRHPAGVIKLLWHPTQPVVYSCTVEGLIYVWDARTGQLLKTLAGHTDMVLDMAFIPAFESN---------PVAG------LLTASDDESVRFFR 410
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Match: A0A7J8MUV8_9ROSI (ANAPC4_WD40 domain-containing protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J8MUV8_9ROSI) HSP 1 Score: 119 bits (297), Expect = 2.530e-29 Identity = 59/152 (38.82%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 1 VFAGHEKKVSCVMFTTSGKAVVTGSDDATVRVWAPRTGECRHAFSGHGFHVGAITCLASHPDPAQSPLVMSGGEDGTARIMHVQNKRVVGTMVH----CDAGEGSVEAVGFCATHPWVATGGTDGGLKVWDSVSGTCRHMCTHPAGVTKLEW 444 VF+GH+ V+C FT GK + TGS+DAT R+W PR+GE H GH +H +TCL+ D S L ++G +DG+ I+++ +VV + D S+E V F PW GG D L +WD + + R +C H GVT L W Sbjct: 12 VFSGHDAIVTCGDFTPDGKTICTGSEDATFRIWNPRSGESIHVVRGHPYHTEGLTCLSISFD---STLAITGSKDGSVHIVNITTGKVVSSCFSQTGSTDGNPESIECVLFAPNFPWAVFGGMDQNLTIWDLQNSSPRFICNHEEGVTCLAW 160 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10818.1738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10818.1738.1 >prot_M-pyrifera_M_contig10818.1738.1 ID=prot_M-pyrifera_M_contig10818.1738.1|Name=mRNA_M-pyrifera_M_contig10818.1738.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp VFAGHEKKVSCVMFTTSGKAVVTGSDDATVRVWAPRTGECRHAFSGHGFHback to top mRNA from alignment at M-pyrifera_M_contig10818:5386..10149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10818.1738.1 ID=mRNA_M-pyrifera_M_contig10818.1738.1|Name=mRNA_M-pyrifera_M_contig10818.1738.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4764bp|location=Sequence derived from alignment at M-pyrifera_M_contig10818:5386..10149- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10818:5386..10149- >mRNA_M-pyrifera_M_contig10818.1738.1 ID=mRNA_M-pyrifera_M_contig10818.1738.1|Name=mRNA_M-pyrifera_M_contig10818.1738.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1422bp|location=Sequence derived from alignment at M-pyrifera_M_contig10818:5386..10149- (Macrocystis pyrifera P11B4 male)back to top |