mRNA_M-pyrifera_M_contig108160.1736.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108160.1736.1
Unique NamemRNA_M-pyrifera_M_contig108160.1736.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: L8H1H1_ACACA (Peptidase, M20/M25/M40 superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1H1_ACACA)

HSP 1 Score: 137 bits (345), Expect = 6.620e-37
Identity = 66/126 (52.38%), Postives = 92/126 (73.02%), Query Frame = 1
Query:   16 RSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNEV 393
            R+PGA+DDASG+S+V+EVFRVL +N  R +R++EFH Y+AEEVGLRGS+ IA++Y ++GK+V GM+QLDM GY     P   ++ D  +  L  F++  A  YSSL   ++ CGYACSDHAS+ + 
Sbjct:  160 RAPGADDDASGSSSVLEVFRVLAKNGFRGSRSIEFHAYAAEEVGLRGSQAIASTYQKEGKVVAGMMQLDMVGYVAKGNPVYAIVTDYVSAPLTQFVRDLAKEYSSLPVVDTRCGYACSDHASWTKA 285          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A1Y2CDL9_9FUNG (Peptide hydrolase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CDL9_9FUNG)

HSP 1 Score: 135 bits (341), Expect = 7.010e-36
Identity = 69/131 (52.67%), Postives = 87/131 (66.41%), Query Frame = 1
Query:    4 PPYPRSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGY-PKMSEPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNEV 393
            P + R+PGA+DD SGT+ V+E +RVL E+ V P R +EFH YSAEE GL GS+ +A  Y  DG+ V GM Q+DMTGY P    PQ  +IND T+P L  FLK    AYS +   +S CGY CSDHAS+ + 
Sbjct:  206 PYFGRAPGADDDGSGTTTVLEAYRVLAESNVVPKRPIEFHFYSAEEAGLLGSQKVAAQYKRDGRQVAGMYQVDMTGYVPPNKTPQIALINDFTDPDLAAFLKKLVVAYSGVDPVDSVCGYGCSDHASWTKA 336          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: L8H243_ACACA (Peptidase, M20/M25/M40 superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H243_ACACA)

HSP 1 Score: 135 bits (340), Expect = 8.820e-36
Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = 1
Query:   16 RSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNEV 393
            RSPGA+DDASG+S+V+EVFRVL  N  R +R++EFH Y+AEEVGL GS+ IA++Y ++GK+V GM+QLDM GY   ++P   ++ D  N  L  F++  A  Y+ L   N++CGY CSDHAS+ + 
Sbjct:  205 RSPGADDDASGSSSVLEVFRVLASNGFRGSRSIEFHAYAAEEVGLLGSQAIASTYQKEGKVVAGMMQLDMVGYVNNNDPVFGIVTDYVNESLTQFVRELAQEYTHLPVKNTKCGYGCSDHASWTKA 330          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A167NJA5_PHYB8 (Peptide hydrolase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167NJA5_PHYB8)

HSP 1 Score: 133 bits (334), Expect = 3.140e-35
Identity = 62/131 (47.33%), Postives = 91/131 (69.47%), Query Frame = 1
Query:    1 VPPYPRSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNEV 393
            +P + RSPGA+DD SG++++ E FR L +N  +P R +EFH YSAEE GL GS+D++ +Y +DGK V GMLQ DMTGY   +     ++ D+ + +L DFLK+    Y+ + +  +ECGYACSDHAS+ ++
Sbjct:  157 LPSFGRSPGADDDGSGSTSIFEAFRSLSQNGFKPERPVEFHWYSAEEAGLLGSQDVSRAYEKDGKRVVGMLQTDMTGYIGANGEVIGIVTDHVDEKLTDFLKATVDEYADIPYVLTECGYACSDHASWRKI 287          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A507ET84_9FUNG (Peptide hydrolase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507ET84_9FUNG)

HSP 1 Score: 134 bits (336), Expect = 4.370e-35
Identity = 64/131 (48.85%), Postives = 90/131 (68.70%), Query Frame = 1
Query:    4 PPYPRSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGY-PKMSEPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNEV 393
            P + RSPGA+DD SGT+ ++E +RVL+ +   P+R +EFH YSAEE GL GS+ +A  Y  +G+ + GM Q DMTGY PK  +P   ++ D  +P L DFL+  A AYSS+   +++CGYACSDHAS+ + 
Sbjct:  209 PYFGRSPGADDDGSGTTTILEAYRVLLGSGFTPSRPIEFHWYSAEEAGLLGSQKVAAQYKSEGRQIAGMYQCDMTGYVPKGRDPIVAIVTDFVDPDLTDFLRKVAGAYSSVKVVDTQCGYACSDHASWTKA 339          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A7S4IW19_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IW19_9EUKA)

HSP 1 Score: 131 bits (330), Expect = 2.020e-34
Identity = 63/124 (50.81%), Postives = 90/124 (72.58%), Query Frame = 1
Query:   16 RSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMS-EPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASF 384
            RSPG +DD SGT  V+EVFRVL+++  +P RT+EFH Y+AEEVGL+GS+ +A++Y ++ K+V GM+QLDMT Y  ++ E    ++ DNT+  L  FL+    AY+ + W N+ CGY CSDHAS+
Sbjct:  186 RSPGVDDDGSGTVCVLEVFRVLVDSGFKPNRTIEFHFYAAEEVGLKGSQAVASAYADEQKVVVGMMQLDMTFYDGINNENVVGVVTDNTDDSLNAFLRQLIDAYALIPWVNTVCGYGCSDHASW 309          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A137PG77_CONC2 (Peptide hydrolase (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PG77_CONC2)

HSP 1 Score: 124 bits (312), Expect = 1.060e-33
Identity = 62/125 (49.60%), Postives = 84/125 (67.20%), Query Frame = 1
Query:   16 RSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNE 390
            R+PGA+DDA+G++ V+E FR L     +P RT+EF  Y+AEEVGLRGS DIA  Y  +GK V   LQ DM G+   S+ Q R+IND T+PQL +F+K    +Y+   W + +C Y CSDHA++ E
Sbjct:    1 RAPGADDDATGSATVIESFRALTRIGFKPKRTIEFQWYAAEEVGLRGSRDIAQQYRAEGKNVVSQLQADMNGHS--SKRQVRIINDYTDPQLSNFMKRLVESYTEYWWIDGKCNYGCSDHAAWTE 123          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A4P9Z408_9FUNG (Peptide hydrolase n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z408_9FUNG)

HSP 1 Score: 129 bits (325), Expect = 1.480e-33
Identity = 64/133 (48.12%), Postives = 87/133 (65.41%), Query Frame = 1
Query:    1 VPPYPRSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQPRMIN---DNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNE 390
            +P + R+PGA+DD SGT   +E FR L+E   RP R++EFH YSAEE GL GS+D+A++Y  +G+ +  MLQ DMTG+     P P +I    D  + +L  FLK    AYS + W   +CGYACSDHAS+N+
Sbjct:  202 IPAFGRAPGADDDGSGTVTTLEAFRALVEGNFRPERSVEFHWYSAEEAGLLGSQDVASAYNREGRKIVAMLQNDMTGF----RPDPEVIGVVTDFVDGELTGFLKQLIAAYSGVQWSEMKCGYACSDHASWNK 330          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A137P6F7_CONC2 (Peptide hydrolase n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6F7_CONC2)

HSP 1 Score: 129 bits (324), Expect = 2.010e-33
Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 1
Query:    1 VPPYPRSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQPRMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNE 390
            +P + ++PGA+DD SGT++V E FRVLI+   +P R +EFH Y+ EE GL GS+DIA SY E  + +  M+  DMTGY    E Q  ++ D+T+P+L  FLK   +AYS L    S+CGY CSDHAS+N+
Sbjct:  202 LPWFGKAPGADDDGSGTTSVHEAFRVLIDGKFKPQRNVEFHFYAGEEGGLLGSQDIARSYAEQKRNIVAMMHFDMTGYFGRKE-QIAVVTDHTDPELSQFLKKLISAYSELPQVESQCGYGCSDHASWNK 330          
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Match: A0A1X2IBB4_9FUNG (Peptide hydrolase n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IBB4_9FUNG)

HSP 1 Score: 129 bits (324), Expect = 2.150e-33
Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 1
Query:    1 VPPYPRSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGLRGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQP-RMINDNTNPQLMDFLKSAATAYSSLTWYNSECGYACSDHASFNEV 393
            +P + RSPGA+DD SGT  ++E FR L+ N  +P RT+EFH YS EE GL GS+D+A  Y++DG+ V  M+Q DMTGY   S+ +   ++ D+ + +L DFLK+    Y+ + +  ++CGYACSDHAS+ + 
Sbjct:  203 LPYWGRSPGADDDGSGTVTILEAFRSLVHNGFKPERTVEFHWYSGEEAGLLGSQDVADQYVKDGRRVVAMIQNDMTGYTAGSKEEVIGIVTDHVDEKLTDFLKTLVDTYADIPYVLTKCGYACSDHASWRKA 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108160.1736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8H1H1_ACACA6.620e-3752.38Peptidase, M20/M25/M40 superfamily protein n=1 Tax... [more]
A0A1Y2CDL9_9FUNG7.010e-3652.67Peptide hydrolase n=1 Tax=Rhizoclosmatium globosum... [more]
L8H243_ACACA8.820e-3651.59Peptidase, M20/M25/M40 superfamily protein n=1 Tax... [more]
A0A167NJA5_PHYB83.140e-3547.33Peptide hydrolase n=1 Tax=Phycomyces blakesleeanus... [more]
A0A507ET84_9FUNG4.370e-3548.85Peptide hydrolase n=1 Tax=Chytriomyces confervae T... [more]
A0A7S4IW19_9EUKA2.020e-3450.81Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A137PG77_CONC21.060e-3349.60Peptide hydrolase (Fragment) n=1 Tax=Conidiobolus ... [more]
A0A4P9Z408_9FUNG1.480e-3348.12Peptide hydrolase n=1 Tax=Syncephalis pseudoplumig... [more]
A0A137P6F7_CONC22.010e-3349.23Peptide hydrolase n=1 Tax=Conidiobolus coronatus (... [more]
A0A1X2IBB4_9FUNG2.150e-3346.21Peptide hydrolase n=1 Tax=Absidia repens TaxID=902... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108160contigM-pyrifera_M_contig108160:118..560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score125.9
Seed ortholog evalue1.3e-26
Seed eggNOG ortholog36080.S2JIB1
KEGG koko:K05994
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Peptidase family M20/M25/M40
EggNOG OGs1GW2R@112252,38HFK@33154,3NVAW@4751,COG2234@1,KOG2195@2759
EC3.4.11.10
COG Functional cat.O
Best tax levelFungi incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons2
Model size393
Cds size393
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815591.534075-CDS-M-pyrifera_M_contig108160:117..4671622815591.534075-CDS-M-pyrifera_M_contig108160:117..467Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108160 118..467 +
1692277477.9968333-CDS-M-pyrifera_M_contig108160:117..4671692277477.9968333-CDS-M-pyrifera_M_contig108160:117..467Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108160 118..467 +
1622815591.5452201-CDS-M-pyrifera_M_contig108160:517..5601622815591.5452201-CDS-M-pyrifera_M_contig108160:517..560Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108160 518..560 +
1692277478.014757-CDS-M-pyrifera_M_contig108160:517..5601692277478.014757-CDS-M-pyrifera_M_contig108160:517..560Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108160 518..560 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108160.1736.1prot_M-pyrifera_M_contig108160.1736.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108160 118..560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108160.1736.1

>prot_M-pyrifera_M_contig108160.1736.1 ID=prot_M-pyrifera_M_contig108160.1736.1|Name=mRNA_M-pyrifera_M_contig108160.1736.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp
VPPYPRSPGANDDASGTSNVMEVFRVLIENAVRPTRTMEFHLYSAEEVGL
RGSEDIATSYLEDGKLVQGMLQLDMTGYPKMSEPQPRMINDNTNPQLMDF
LKSAATAYSSLTWYNSECGYACSDHASFNEV
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mRNA from alignment at M-pyrifera_M_contig108160:118..560+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108160.1736.1 ID=mRNA_M-pyrifera_M_contig108160.1736.1|Name=mRNA_M-pyrifera_M_contig108160.1736.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=443bp|location=Sequence derived from alignment at M-pyrifera_M_contig108160:118..560+ (Macrocystis pyrifera P11B4 male)
GTCCCTCCCTACCCGAGGTCTCCTGGTGCCAACGACGATGCTAGCGGCAC CTCCAACGTCATGGAGGTGTTCCGTGTGTTGATCGAGAACGCTGTTCGCC CCACGCGAACAATGGAGTTCCACCTCTACTCTGCAGAGGAGGTAGGCCTC CGTGGCTCAGAGGATATCGCCACCAGCTACCTGGAGGATGGCAAGCTGGT ACAGGGCATGCTTCAGCTCGACATGACGGGCTACCCCAAGATGTCCGAGC CTCAGCCGCGCATGATCAACGACAACACCAACCCACAGCTCATGGACTTC CTCAAGTCCGCGGCTACGGCATACTCCAGTTTGACGTGGTACAACAGCGA GTACGTATGCCTTTCCTTTGCCTTTCCCGCAAGCACTTACGCCTTGACAG ATGCGGATACGCATGCTCAGACCATGCTTCCTTCAATGAGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig108160:118..560+

>mRNA_M-pyrifera_M_contig108160.1736.1 ID=mRNA_M-pyrifera_M_contig108160.1736.1|Name=mRNA_M-pyrifera_M_contig108160.1736.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig108160:118..560+ (Macrocystis pyrifera P11B4 male)
GTCCCTCCCTACCCGAGGTCTCCTGGTGCCAACGACGATGCTAGCGGCAC
CTCCAACGTCATGGAGGTGTTCCGTGTGTTGATCGAGAACGCTGTTCGCC
CCACGCGAACAATGGAGTTCCACCTCTACTCTGCAGAGGAGGTAGGCCTC
CGTGGCTCAGAGGATATCGCCACCAGCTACCTGGAGGATGGCAAGCTGGT
ACAGGGCATGCTTCAGCTCGACATGACGGGCTACCCCAAGATGTCCGAGC
CTCAGCCGCGCATGATCAACGACAACACCAACCCACAGCTCATGGACTTC
CTCAAGTCCGCGGCTACGGCATACTCCAGTTTGACGTGGTACAACAGCGA
GTCCCTCCCTACCCGAGGTCTCCTGGTGCCAACGACGATGCTAGCGGCAC
CTCCAACGTCATGGAGGTGTTCCGTGTGTTGATCGAGAACGCTGTTCGCC
CCACGCGAACAATGGAGTTCCACCTCTACTCTGCAGAGGAGGTAGGCCTC
CGTGGCTCAGAGGATATCGCCACCAGCTACCTGGAGGATGGCAAGCTGGT
ACAGGGCATGCTTCAGCTCGACATGACGGGCTACCCCAAGATGTCCGAGC
CTCAGCCGCGCATGATCAACGACAACACCAACCCACAGCTCATGGACTTC
CTCAAGTCCGCGGCTACGGCATACTCCAGTTTGACGTGGTACAACAGCGA
ATGCGGATACGCATGCTCAGACCATGCTTCCTTCAATGAGGTGATGCGGA
TACGCATGCTCAGACCATGCTTCCTTCAATGAGGTG
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